RNA–Protein interactions for RNA: ENST00000606000.1

CTSA-210, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 644 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-210ENST00000606000 PFN2P35080 140 aa7.42□□□□□ -1.22
CTSA-210ENST00000606000 CTAG1AP78358 180 aa7.42□□□□□ -1.22
CTSA-210ENST00000606000 TMEM170BQ5T4T1 132 aa7.42□□□□□ -1.22
CTSA-210ENST00000606000 MRPL55Q7Z7F7 128 aaKnown RBP7.42□□□□□ -1.22
CTSA-210ENST00000606000 PRR26Q8N8Z3 221 aa7.42□□□□□ -1.22
CTSA-210ENST00000606000 ZNF625Q96I27 306 aaPredicted RBP7.42□□□□□ -1.22
CTSA-210ENST00000606000 PMCHL2Q9BQD1 86 aa7.42□□□□□ -1.22
CTSA-210ENST00000606000 HSPB8Q9UJY1 196 aa7.42□□□□□ -1.22
CTSA-210ENST00000606000 GAGE10A6NGK3 116 aa7.41□□□□□ -1.22
CTSA-210ENST00000606000 RPL37AP8A6NKH3 93 aa7.41□□□□□ -1.22
CTSA-210ENST00000606000 KRTAP1-4P0C5Y4 121 aa7.41□□□□□ -1.22
CTSA-210ENST00000606000 COA6Q5JTJ3 125 aaKnown RBP7.41□□□□□ -1.22
CTSA-210ENST00000606000 TRAV12-1A0A0B4J245 112 aa7.4□□□□□ -1.22
CTSA-210ENST00000606000 SMIM6P0DI80 62 aa7.4□□□□□ -1.22
CTSA-210ENST00000606000 LINC00167Q96N53 147 aa7.4□□□□□ -1.22
CTSA-210ENST00000606000 LBHQ53QV2 105 aaPredicted RBP7.39□□□□□ -1.23
CTSA-210ENST00000606000 Q8NDZ9 215 aa7.39□□□□□ -1.23
CTSA-210ENST00000606000 TP73-AS1Q9UF72 201 aa7.39□□□□□ -1.23
CTSA-210ENST00000606000 ERG28Q9UKR5 140 aa7.39□□□□□ -1.23
CTSA-210ENST00000606000 MAP1LC3CQ9BXW4 147 aa7.38□□□□□ -1.23
CTSA-210ENST00000606000 UBR4Q5T4S7 5183 aa7.38□□□□□ -1.23
CTSA-210ENST00000606000 IGLV5-37A0A075B6J1 123 aa7.37□□□□□ -1.23
CTSA-210ENST00000606000 TMEM223A0PJW6 202 aa7.37□□□□□ -1.23
CTSA-210ENST00000606000 ZNF861PO60384 105 aa7.37□□□□□ -1.23
CTSA-210ENST00000606000 SND1-IT1Q9HBX3 110 aa7.37□□□□□ -1.23
CTSA-210ENST00000606000 VPREB1P12018 145 aa7.36□□□□□ -1.23
CTSA-210ENST00000606000 KRTDAPP60985 99 aa7.36□□□□□ -1.23
CTSA-210ENST00000606000 SNRPEP62304 92 aaKnown RBP7.36□□□□□ -1.23
CTSA-210ENST00000606000 NKAPP1Q8N9T2 125 aa7.36□□□□□ -1.23
CTSA-210ENST00000606000 C12orf57Q99622 126 aa7.36□□□□□ -1.23
CTSA-210ENST00000606000 IGKV2-28A0A075B6P5 120 aa7.35□□□□□ -1.23
CTSA-210ENST00000606000 A0A0U1RRA0 63 aa7.35□□□□□ -1.23
CTSA-210ENST00000606000 SYS1-DBNDD2H3BUS1 97 aa7.35□□□□□ -1.23
CTSA-210ENST00000606000 BCE1O60756 84 aa7.35□□□□□ -1.23
CTSA-210ENST00000606000 IGKV2D-28P01615 120 aa7.35□□□□□ -1.23
CTSA-210ENST00000606000 S100A6P06703 90 aa7.35□□□□□ -1.23
CTSA-210ENST00000606000 C3orf79P0CE67 100 aa7.35□□□□□ -1.23
CTSA-210ENST00000606000 HIST3H2BBQ8N257 126 aa7.35□□□□□ -1.23
CTSA-210ENST00000606000 DPM2O94777 84 aa7.34□□□□□ -1.23
CTSA-210ENST00000606000 IGKCP01834 107 aa7.33□□□□□ -1.24
CTSA-210ENST00000606000 PLNP26678 52 aa7.33□□□□□ -1.24
CTSA-210ENST00000606000 S100A2P29034 98 aa7.33□□□□□ -1.24
CTSA-210ENST00000606000 HIST1H2BLQ99880 126 aa7.33□□□□□ -1.24
CTSA-210ENST00000606000 IGLV1-50A0A075B6I6 118 aa7.32□□□□□ -1.24
CTSA-210ENST00000606000 TMEM238C9JI98 176 aa7.32□□□□□ -1.24
CTSA-210ENST00000606000 RPL28P46779 137 aaKnown RBP7.32□□□□□ -1.24
CTSA-210ENST00000606000 AKR1D1P51857 326 aa7.32□□□□□ -1.24
CTSA-210ENST00000606000 LINC00158P58513 81 aa7.32□□□□□ -1.24
CTSA-210ENST00000606000 COX17Q14061 63 aa7.32□□□□□ -1.24
CTSA-210ENST00000606000 KRTAP13-1Q8IUC0 172 aa7.32□□□□□ -1.24
CTSA-210ENST00000606000 TSPEAR-AS2P59090 65 aa7.31□□□□□ -1.24
CTSA-210ENST00000606000 LINC01545Q5VT33 79 aa7.31□□□□□ -1.24
CTSA-210ENST00000606000 PET117Q6UWS5 81 aa7.31□□□□□ -1.24
CTSA-210ENST00000606000 LRP2P98164 4655 aa7.31□□□□□ -1.24
CTSA-210ENST00000606000 A0A087X002 238 aa7.3□□□□□ -1.24
CTSA-210ENST00000606000 SMIM13P0DJ93 91 aa7.3□□□□□ -1.24
CTSA-210ENST00000606000 UBE2AP49459 152 aa7.3□□□□□ -1.24
CTSA-210ENST00000606000 PRLHP81277 87 aa7.3□□□□□ -1.24
CTSA-210ENST00000606000 SFTA2Q6UW10 78 aa7.3□□□□□ -1.24
CTSA-210ENST00000606000 ANAPC11Q9NYG5 84 aa7.3□□□□□ -1.24
CTSA-210ENST00000606000 MEIG1Q5JSS6 88 aa7.29□□□□□ -1.24
CTSA-210ENST00000606000 ATOH7Q8N100 152 aa7.29□□□□□ -1.24
CTSA-210ENST00000606000 TMEM126AQ9H061 195 aa7.29□□□□□ -1.24
CTSA-210ENST00000606000 M0R378 163 aa7.28□□□□□ -1.24
CTSA-210ENST00000606000 RPL24P83731 157 aaKnown RBP7.28□□□□□ -1.24
CTSA-210ENST00000606000 MIR7-3HGQ8N6C7 128 aa7.28□□□□□ -1.24
CTSA-210ENST00000606000 NDUFA12Q9UI09 145 aa7.28□□□□□ -1.24
CTSA-210ENST00000606000 RPL13AP40429 203 aaKnown RBP7.27□□□□□ -1.25
CTSA-210ENST00000606000 HERVK_113P61574 105 aa7.27□□□□□ -1.25
CTSA-210ENST00000606000 PYY3Q5JQD4 70 aa7.27□□□□□ -1.25
CTSA-210ENST00000606000 FAM19A1Q7Z5A9 133 aa7.27□□□□□ -1.25
CTSA-210ENST00000606000 C20orf202A1L168 122 aa7.26□□□□□ -1.25
CTSA-210ENST00000606000 NCR3O14931 201 aa7.26□□□□□ -1.25
CTSA-210ENST00000606000 LEPROTO15243 131 aa7.26□□□□□ -1.25
CTSA-210ENST00000606000 LPAP08519 4548 aa7.26□□□□□ -1.25
CTSA-210ENST00000606000 J3QQQ9 107 aa7.25□□□□□ -1.25
CTSA-210ENST00000606000 HERV-K104P63124 156 aa7.25□□□□□ -1.25
CTSA-210ENST00000606000 BOD1L2Q8IYS8 172 aa7.25□□□□□ -1.25
CTSA-210ENST00000606000 DAND5Q8N907 189 aa7.25□□□□□ -1.25
CTSA-210ENST00000606000 PLEKHB2Q96CS7 222 aa7.25□□□□□ -1.25
CTSA-210ENST00000606000 LGALS3P17931 250 aaKnown RBP7.24□□□□□ -1.25
CTSA-210ENST00000606000 KRTAP13-2Q52LG2 175 aa7.24□□□□□ -1.25
CTSA-210ENST00000606000 IGKV2D-26A0A0A0MRZ7 120 aa7.23□□□□□ -1.25
CTSA-210ENST00000606000 MYMXA0A1B0GTQ4 84 aa7.23□□□□□ -1.25
CTSA-210ENST00000606000 LINC00587B1AMM8 73 aa7.23□□□□□ -1.25
CTSA-210ENST00000606000 E9PLD3 99 aa7.23□□□□□ -1.25
CTSA-210ENST00000606000 TSPAN13O95857 204 aa7.23□□□□□ -1.25
CTSA-210ENST00000606000 TTTY13Q9BZ97 58 aa7.23□□□□□ -1.25
CTSA-210ENST00000606000 PCP4L1A6NKN8 68 aa7.22□□□□□ -1.25
CTSA-210ENST00000606000 CRYGAP11844 174 aa7.22□□□□□ -1.25
CTSA-210ENST00000606000 ANKRD39Q53RE8 183 aa7.22□□□□□ -1.25
CTSA-210ENST00000606000 TYMSOSQ8TAI1 123 aa7.22□□□□□ -1.25
CTSA-210ENST00000606000 SCGB1D1O95968 90 aa7.21□□□□□ -1.26
CTSA-210ENST00000606000 JOSD1Q15040 202 aaPredicted RBP7.21□□□□□ -1.26
CTSA-210ENST00000606000 HIGD2AQ9BW72 106 aa7.21□□□□□ -1.26
CTSA-210ENST00000606000 NMUP48645 174 aa7.2□□□□□ -1.26
CTSA-210ENST00000606000 TRBV10-3A0A0K0K1G6 114 aa7.19□□□□□ -1.26
CTSA-210ENST00000606000 PRR4Q16378 134 aa7.19□□□□□ -1.26
CTSA-210ENST00000606000 ZNF815PA8K554 130 aa7.18□□□□□ -1.26
CTSA-210ENST00000606000 PRYO14603 147 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms