RNA–Protein interactions for RNA: ENST00000603885.5

CCDC12-208, Transcript of coiled-coil domain containing 12, humanhuman

TSL 3

Gene CCDC12, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-208ENST00000603885 TMEM126AQ9H061 195 aa10.72□□□□□ -0.69
CCDC12-208ENST00000603885 A0A0U1RRA0 63 aa10.71□□□□□ -0.69
CCDC12-208ENST00000603885 Q8NDZ9 215 aa10.71□□□□□ -0.69
CCDC12-208ENST00000603885 LPAP08519 4548 aa10.71□□□□□ -0.7
CCDC12-208ENST00000603885 TMEM238C9JI98 176 aa10.7□□□□□ -0.7
CCDC12-208ENST00000603885 PRLHP81277 87 aa10.7□□□□□ -0.7
CCDC12-208ENST00000603885 FAM19A1Q7Z5A9 133 aa10.7□□□□□ -0.7
CCDC12-208ENST00000603885 TYMSOSQ8TAI1 123 aa10.7□□□□□ -0.7
CCDC12-208ENST00000603885 H0Y8G0 127 aa10.69□□□□□ -0.7
CCDC12-208ENST00000603885 ATP6V1G1O75348 118 aa10.69□□□□□ -0.7
CCDC12-208ENST00000603885 M0R378 163 aa10.68□□□□□ -0.7
CCDC12-208ENST00000603885 SERF1AO75920 110 aa10.68□□□□□ -0.7
CCDC12-208ENST00000603885 LEPROTL1O95214 131 aa10.68□□□□□ -0.7
CCDC12-208ENST00000603885 SMIM13P0DJ93 91 aa10.68□□□□□ -0.7
CCDC12-208ENST00000603885 HERV-K104P63124 156 aa10.68□□□□□ -0.7
CCDC12-208ENST00000603885 MEIG1Q5JSS6 88 aa10.68□□□□□ -0.7
CCDC12-208ENST00000603885 ANAPC11Q9NYG5 84 aa10.68□□□□□ -0.7
CCDC12-208ENST00000603885 PRR4Q16378 134 aa10.67□□□□□ -0.7
CCDC12-208ENST00000603885 FAM229BQ4G0N7 80 aa10.67□□□□□ -0.7
CCDC12-208ENST00000603885 TSPAN13O95857 204 aa10.66□□□□□ -0.7
CCDC12-208ENST00000603885 LINC00310P59036 64 aa10.66□□□□□ -0.7
CCDC12-208ENST00000603885 SLC7A5P1Q8MH63 180 aa10.66□□□□□ -0.7
CCDC12-208ENST00000603885 NDUFA12Q9UI09 145 aa10.66□□□□□ -0.7
CCDC12-208ENST00000603885 LINC00587B1AMM8 73 aa10.65□□□□□ -0.7
CCDC12-208ENST00000603885 MIR7-3HGQ8N6C7 128 aa10.65□□□□□ -0.7
CCDC12-208ENST00000603885 MYMXA0A1B0GTQ4 84 aa10.64□□□□□ -0.71
CCDC12-208ENST00000603885 BOD1L2Q8IYS8 172 aa10.64□□□□□ -0.71
CCDC12-208ENST00000603885 HSPB8Q9UJY1 196 aa10.64□□□□□ -0.71
CCDC12-208ENST00000603885 PLNP26678 52 aa10.63□□□□□ -0.71
CCDC12-208ENST00000603885 KRTAP13-2Q52LG2 175 aa10.63□□□□□ -0.71
CCDC12-208ENST00000603885 MAP1LC3CQ9BXW4 147 aa10.63□□□□□ -0.71
CCDC12-208ENST00000603885 IGKV2D-26A0A0A0MRZ7 120 aa10.61□□□□□ -0.71
CCDC12-208ENST00000603885 COLCA2A8K830 154 aa10.61□□□□□ -0.71
CCDC12-208ENST00000603885 LEPROTO15243 131 aa10.61□□□□□ -0.71
CCDC12-208ENST00000603885 FABP4P15090 132 aa10.61□□□□□ -0.71
CCDC12-208ENST00000603885 PLEKHB2Q96CS7 222 aa10.61□□□□□ -0.71
CCDC12-208ENST00000603885 HIGD2AQ9BW72 106 aa10.61□□□□□ -0.71
CCDC12-208ENST00000603885 NCR3O14931 201 aa10.6□□□□□ -0.71
CCDC12-208ENST00000603885 DPM2O94777 84 aa10.6□□□□□ -0.71
CCDC12-208ENST00000603885 TSPEAR-AS2P59090 65 aa10.6□□□□□ -0.71
CCDC12-208ENST00000603885 PRYO14603 147 aa10.59□□□□□ -0.71
CCDC12-208ENST00000603885 HERVK_113P61574 105 aa10.59□□□□□ -0.71
CCDC12-208ENST00000603885 LINC00304Q8N9R0 145 aa10.58□□□□□ -0.72
CCDC12-208ENST00000603885 J3QQQ9 107 aa10.57□□□□□ -0.72
CCDC12-208ENST00000603885 IGKCP01834 107 aa10.57□□□□□ -0.72
CCDC12-208ENST00000603885 PMCHL2Q9BQD1 86 aa10.57□□□□□ -0.72
CCDC12-208ENST00000603885 NMUP48645 174 aa10.56□□□□□ -0.72
CCDC12-208ENST00000603885 KCNQ1DNQ9H478 68 aa10.56□□□□□ -0.72
CCDC12-208ENST00000603885 LGALS3P17931 250 aaKnown RBP10.55□□□□□ -0.72
CCDC12-208ENST00000603885 LINC00337Q8N6G1 96 aa10.55□□□□□ -0.72
CCDC12-208ENST00000603885 SPRR1AP35321 89 aa10.54□□□□□ -0.72
CCDC12-208ENST00000603885 S100A12P80511 92 aa10.54□□□□□ -0.72
CCDC12-208ENST00000603885 DAND5Q8N907 189 aa10.54□□□□□ -0.72
CCDC12-208ENST00000603885 ZNF706Q9Y5V0 76 aaPredicted RBP10.54□□□□□ -0.72
CCDC12-208ENST00000603885 LOC107984156A0A0G2JMH3 177 aa10.53□□□□□ -0.72
CCDC12-208ENST00000603885 TRBV10-3A0A0K0K1G6 114 aa10.53□□□□□ -0.72
CCDC12-208ENST00000603885 ETDCA0A1B0GVM5 59 aa10.53□□□□□ -0.72
CCDC12-208ENST00000603885 ARL17AQ8IVW1 177 aa10.53□□□□□ -0.72
CCDC12-208ENST00000603885 SPRR4Q96PI1 79 aa10.53□□□□□ -0.72
CCDC12-208ENST00000603885 MIEN1Q9BRT3 115 aa10.52□□□□□ -0.73
CCDC12-208ENST00000603885 C3orf22Q8N5N4 141 aa10.51□□□□□ -0.73
CCDC12-208ENST00000603885 TRBV10-2A0A0K0K1G8 114 aa10.5□□□□□ -0.73
CCDC12-208ENST00000603885 KRTAP4-16G5E9R7 235 aaPredicted RBP10.5□□□□□ -0.73
CCDC12-208ENST00000603885 CTAG1AP78358 180 aa10.5□□□□□ -0.73
CCDC12-208ENST00000603885 SPANXB1Q9NS25 103 aaPredicted RBP10.49□□□□□ -0.73
CCDC12-208ENST00000603885 HIST1H2BKO60814 126 aa10.48□□□□□ -0.73
CCDC12-208ENST00000603885 HIST1H2BJP06899 126 aa10.48□□□□□ -0.73
CCDC12-208ENST00000603885 HIST1H2BOP23527 126 aa10.48□□□□□ -0.73
CCDC12-208ENST00000603885 DDTP30046 118 aa10.48□□□□□ -0.73
CCDC12-208ENST00000603885 HIST1H2BBP33778 126 aa10.48□□□□□ -0.73
CCDC12-208ENST00000603885 HIST1H2BDP58876 126 aa10.48□□□□□ -0.73
CCDC12-208ENST00000603885 HIST1H2BCP62807 126 aa10.48□□□□□ -0.73
CCDC12-208ENST00000603885 HIST2H2BEQ16778 126 aa10.48□□□□□ -0.73
CCDC12-208ENST00000603885 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.48□□□□□ -0.73
CCDC12-208ENST00000603885 SMCR5Q8TEV8 140 aa10.48□□□□□ -0.73
CCDC12-208ENST00000603885 HIST1H2BHQ93079 126 aa10.48□□□□□ -0.73
CCDC12-208ENST00000603885 HIST1H2BNQ99877 126 aa10.48□□□□□ -0.73
CCDC12-208ENST00000603885 HIST1H2BMQ99879 126 aa10.48□□□□□ -0.73
CCDC12-208ENST00000603885 RETNLBQ9BQ08 111 aa10.48□□□□□ -0.73
CCDC12-208ENST00000603885 E9PLD3 99 aa10.47□□□□□ -0.73
CCDC12-208ENST00000603885 SYS1-DBNDD2H3BUS1 97 aa10.46□□□□□ -0.73
CCDC12-208ENST00000603885 NDUFC2O95298 119 aa10.46□□□□□ -0.73
CCDC12-208ENST00000603885 A0A0J9YXY3 114 aa10.45□□□□□ -0.74
CCDC12-208ENST00000603885 SPAG11AQ6PDA7 123 aa10.45□□□□□ -0.74
CCDC12-208ENST00000603885 B5MCH6 92 aa10.44□□□□□ -0.74
CCDC12-208ENST00000603885 S100A7L2Q5SY68 101 aa10.44□□□□□ -0.74
CCDC12-208ENST00000603885 PPDPFQ9H3Y8 114 aa10.44□□□□□ -0.74
CCDC12-208ENST00000603885 IGLV6-57P01721 117 aa10.42□□□□□ -0.74
CCDC12-208ENST00000603885 NPC2P61916 151 aa10.42□□□□□ -0.74
CCDC12-208ENST00000603885 C4orf48Q5BLP8 95 aa10.42□□□□□ -0.74
CCDC12-208ENST00000603885 ADAMTSL4-AS1Q5T5F5 129 aa10.42□□□□□ -0.74
CCDC12-208ENST00000603885 LINC00483Q53H64 154 aa10.41□□□□□ -0.74
CCDC12-208ENST00000603885 LINC01545Q5VT33 79 aa10.41□□□□□ -0.74
CCDC12-208ENST00000603885 PET117Q6UWS5 81 aa10.41□□□□□ -0.74
CCDC12-208ENST00000603885 SOSTDC1Q6X4U4 206 aa10.41□□□□□ -0.74
CCDC12-208ENST00000603885 IGLV7-46A0A075B6I9 117 aa10.4□□□□□ -0.74
CCDC12-208ENST00000603885 GAGE2AQ6NT46 116 aa10.4□□□□□ -0.74
CCDC12-208ENST00000603885 Q6ZRX8 168 aa10.4□□□□□ -0.74
CCDC12-208ENST00000603885 TRAV23DV6A0A075B6W5 121 aa10.39□□□□□ -0.75
CCDC12-208ENST00000603885 EIF4EBP3O60516 100 aaPredicted RBP10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 94.2 ms