RNA–Protein interactions for RNA: ENST00000602574.5

COMMD3-215, Transcript of COMM domain containing 3, humanhuman

TSL 1 (best)

Gene COMMD3, Length 2,290 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-215ENST00000602574 IGKV3-20P01619 116 aa5.64□□□□□ -1.51
COMMD3-215ENST00000602574 P0C880 135 aa5.64□□□□□ -1.51
COMMD3-215ENST00000602574 PRR34Q9NV39 138 aa5.64□□□□□ -1.51
COMMD3-215ENST00000602574 MSMBP08118 114 aa5.63□□□□□ -1.51
COMMD3-215ENST00000602574 SEC61BP60468 96 aaKnown RBP5.63□□□□□ -1.51
COMMD3-215ENST00000602574 RANBP2P49792 3224 aaKnown RBP5.63□□□□□ -1.51
COMMD3-215ENST00000602574 LINC00528Q8N1L1 170 aa5.63□□□□□ -1.51
COMMD3-215ENST00000602574 SZT2Q5T011 3432 aa5.62□□□□□ -1.51
COMMD3-215ENST00000602574 ZNF861PO60384 105 aa5.62□□□□□ -1.51
COMMD3-215ENST00000602574 INSP01308 110 aa5.62□□□□□ -1.51
COMMD3-215ENST00000602574 HRES1P13985 223 aa5.61□□□□□ -1.51
COMMD3-215ENST00000602574 IGKV3-7A0A075B6H7 116 aa5.6□□□□□ -1.51
COMMD3-215ENST00000602574 UQCR11O14957 56 aa5.6□□□□□ -1.51
COMMD3-215ENST00000602574 TNP2Q05952 138 aa5.6□□□□□ -1.51
COMMD3-215ENST00000602574 LINC00483Q53H64 154 aa5.6□□□□□ -1.51
COMMD3-215ENST00000602574 DOPEY2Q9Y3R5 2298 aa5.6□□□□□ -1.51
COMMD3-215ENST00000602574 ABCA4P78363 2273 aa5.59□□□□□ -1.51
COMMD3-215ENST00000602574 XIRP2A4UGR9 3374 aa5.59□□□□□ -1.51
COMMD3-215ENST00000602574 H3BUX3 64 aa5.58□□□□□ -1.52
COMMD3-215ENST00000602574 C1orf137Q5JT78 98 aa5.58□□□□□ -1.52
COMMD3-215ENST00000602574 INAFM1C9JVW0 142 aa5.57□□□□□ -1.52
COMMD3-215ENST00000602574 CMC4P56277 68 aaPredicted RBP5.57□□□□□ -1.52
COMMD3-215ENST00000602574 A0A0J9YWU9 116 aa5.57□□□□□ -1.52
COMMD3-215ENST00000602574 GVQW2A0A096LPI5 108 aaPredicted RBP5.55□□□□□ -1.52
COMMD3-215ENST00000602574 WFDC13Q8IUB5 93 aa5.55□□□□□ -1.52
COMMD3-215ENST00000602574 PKDREJQ9NTG1 2253 aa5.55□□□□□ -1.52
COMMD3-215ENST00000602574 WNK2Q9Y3S1 2297 aa5.55□□□□□ -1.52
COMMD3-215ENST00000602574 LAMA1P25391 3075 aa5.55□□□□□ -1.52
COMMD3-215ENST00000602574 DEFB131AP59861 70 aa5.55□□□□□ -1.52
COMMD3-215ENST00000602574 CACNA1BQ00975 2339 aa5.55□□□□□ -1.52
COMMD3-215ENST00000602574 A0A1B0GUV1 79 aa5.54□□□□□ -1.52
COMMD3-215ENST00000602574 Q8N377 158 aa5.54□□□□□ -1.52
COMMD3-215ENST00000602574 EYSQ5T1H1 3165 aa5.53□□□□□ -1.52
COMMD3-215ENST00000602574 CEP290O15078 2479 aa5.53□□□□□ -1.52
COMMD3-215ENST00000602574 A8MWP4 228 aa5.53□□□□□ -1.52
COMMD3-215ENST00000602574 LY6EQ16553 131 aa5.53□□□□□ -1.52
COMMD3-215ENST00000602574 TP53AIP1Q9HCN2 124 aa5.53□□□□□ -1.52
COMMD3-215ENST00000602574 C20orf166-AS1Q96NR2 134 aa5.52□□□□□ -1.53
COMMD3-215ENST00000602574 IGKV3OR2-268A0A0C4DH90 116 aa5.51□□□□□ -1.53
COMMD3-215ENST00000602574 SPTBN5Q9NRC6 3674 aaKnown RBP5.51□□□□□ -1.53
COMMD3-215ENST00000602574 IGLV10-54A0A075B6I4 117 aa5.51□□□□□ -1.53
COMMD3-215ENST00000602574 A0A1B0GU69 56 aa5.51□□□□□ -1.53
COMMD3-215ENST00000602574 WFDC10BQ8IUB3 73 aa5.51□□□□□ -1.53
COMMD3-215ENST00000602574 C7orf33Q8WU49 177 aa5.51□□□□□ -1.53
COMMD3-215ENST00000602574 DMAC1Q96GE9 116 aa5.51□□□□□ -1.53
COMMD3-215ENST00000602574 IGLV5-52A0A0A0MRZ9 124 aa5.5□□□□□ -1.53
COMMD3-215ENST00000602574 BRD3OSQ6XYD6 125 aa5.5□□□□□ -1.53
COMMD3-215ENST00000602574 C16orf74Q96GX8 76 aa5.5□□□□□ -1.53
COMMD3-215ENST00000602574 MGAQ8IWI9 3026 aa5.5□□□□□ -1.53
COMMD3-215ENST00000602574 TRGV1A0A0A0MS02 117 aa5.5□□□□□ -1.53
COMMD3-215ENST00000602574 IGLV9-49A0A0B4J1Y8 123 aa5.5□□□□□ -1.53
COMMD3-215ENST00000602574 CHTF8P0CG12 524 aa5.49□□□□□ -1.53
COMMD3-215ENST00000602574 HTN1P15515 57 aa5.49□□□□□ -1.53
COMMD3-215ENST00000602574 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.49□□□□□ -1.53
COMMD3-215ENST00000602574 C4orf3Q8WVX3 66 aa5.48□□□□□ -1.53
COMMD3-215ENST00000602574 DHRS4-AS1Q9P1J3 65 aa5.48□□□□□ -1.53
COMMD3-215ENST00000602574 ROS1P08922 2347 aa5.48□□□□□ -1.53
COMMD3-215ENST00000602574 A8MUU9 505 aa5.48□□□□□ -1.53
COMMD3-215ENST00000602574 SPTBN1Q01082 2364 aaKnown RBP5.47□□□□□ -1.53
COMMD3-215ENST00000602574 DEFB116Q30KQ4 102 aa5.47□□□□□ -1.53
COMMD3-215ENST00000602574 KRTAP26-1Q6PEX3 210 aa5.47□□□□□ -1.53
COMMD3-215ENST00000602574 DEFB123Q8N688 67 aa5.47□□□□□ -1.53
COMMD3-215ENST00000602574 SPTBN2O15020 2390 aa5.47□□□□□ -1.53
COMMD3-215ENST00000602574 PRUNE2Q8WUY3 3088 aa5.46□□□□□ -1.54
COMMD3-215ENST00000602574 USP34Q70CQ2 3546 aa5.46□□□□□ -1.54
COMMD3-215ENST00000602574 A0A1W2PPR1 153 aa5.46□□□□□ -1.54
COMMD3-215ENST00000602574 NUPR2A6NF83 97 aa5.46□□□□□ -1.54
COMMD3-215ENST00000602574 PCOTHQ58A44 107 aa5.46□□□□□ -1.54
COMMD3-215ENST00000602574 CASC10Q5T4H9 136 aa5.46□□□□□ -1.54
COMMD3-215ENST00000602574 IGKV2-24A0A0C4DH68 120 aa5.45□□□□□ -1.54
COMMD3-215ENST00000602574 K7ERS5 55 aa5.45□□□□□ -1.54
COMMD3-215ENST00000602574 DEFB113Q30KQ7 82 aa5.45□□□□□ -1.54
COMMD3-215ENST00000602574 ACYP2P14621 99 aa5.45□□□□□ -1.54
COMMD3-215ENST00000602574 LINC00472Q9H8W2 130 aa5.45□□□□□ -1.54
COMMD3-215ENST00000602574 TRIOO75962 3097 aa5.45□□□□□ -1.54
COMMD3-215ENST00000602574 LUZP6Q538Z0 58 aa5.44□□□□□ -1.54
COMMD3-215ENST00000602574 C8orf17Q9NRJ1 99 aa5.44□□□□□ -1.54
COMMD3-215ENST00000602574 ZZEF1O43149 2961 aa5.43□□□□□ -1.54
COMMD3-215ENST00000602574 ZDBF2Q9HCK1 2354 aa5.43□□□□□ -1.54
COMMD3-215ENST00000602574 MYO15AQ9UKN7 3530 aa5.43□□□□□ -1.54
COMMD3-215ENST00000602574 APC2O95996 2303 aa5.43□□□□□ -1.54
COMMD3-215ENST00000602574 Q6YL49 198 aa5.43□□□□□ -1.54
COMMD3-215ENST00000602574 CYSRT1A8MQ03 144 aa5.42□□□□□ -1.54
COMMD3-215ENST00000602574 ANKHD1Q8IWZ3 2542 aaKnown RBP5.42□□□□□ -1.54
COMMD3-215ENST00000602574 DNAH10OSP0CZ25 163 aa5.41□□□□□ -1.54
COMMD3-215ENST00000602574 SLURP1P55000 103 aa5.41□□□□□ -1.54
COMMD3-215ENST00000602574 UNQ6190/PRO20217Q6UXQ8 127 aa5.41□□□□□ -1.54
COMMD3-215ENST00000602574 CCL19Q99731 98 aa5.41□□□□□ -1.54
COMMD3-215ENST00000602574 CNOT1A5YKK6 2376 aaKnown RBP5.41□□□□□ -1.54
COMMD3-215ENST00000602574 CFAP54Q96N23 3096 aa5.41□□□□□ -1.54
COMMD3-215ENST00000602574 TPRP12270 2363 aaKnown RBP5.4□□□□□ -1.54
COMMD3-215ENST00000602574 PCNX1Q96RV3 2341 aa5.4□□□□□ -1.54
COMMD3-215ENST00000602574 IGLV8-61A0A075B6I0 122 aa5.4□□□□□ -1.54
COMMD3-215ENST00000602574 NDUFAF8A1L188 74 aa5.4□□□□□ -1.54
COMMD3-215ENST00000602574 Q5W150 140 aa5.4□□□□□ -1.54
COMMD3-215ENST00000602574 VPS13AQ96RL7 3174 aa5.4□□□□□ -1.55
COMMD3-215ENST00000602574 VCANP13611 3396 aa5.4□□□□□ -1.55
COMMD3-215ENST00000602574 MMP24-AS1A0A0U1RRL7 71 aa5.4□□□□□ -1.55
COMMD3-215ENST00000602574 ANGP03950 147 aaKnown RBP5.4□□□□□ -1.55
COMMD3-215ENST00000602574 NOP10Q9NPE3 64 aaKnown RBP5.4□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms