RNA–Protein interactions for RNA: ENST00000601809.5

IRF3-230, Transcript of interferon regulatory factor 3, humanhuman

TSL 2

Gene IRF3, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-230ENST00000601809 ZNF861PO60384 105 aa10.52□□□□□ -0.73
IRF3-230ENST00000601809 KRTAP13-1Q8IUC0 172 aa10.51□□□□□ -0.73
IRF3-230ENST00000601809 HSPB8Q9UJY1 196 aa10.51□□□□□ -0.73
IRF3-230ENST00000601809 GAGE10A6NGK3 116 aa10.5□□□□□ -0.73
IRF3-230ENST00000601809 RPL37AP8A6NKH3 93 aa10.5□□□□□ -0.73
IRF3-230ENST00000601809 H0Y8G0 127 aa10.5□□□□□ -0.73
IRF3-230ENST00000601809 BCE1O60756 84 aa10.5□□□□□ -0.73
IRF3-230ENST00000601809 FABP4P15090 132 aa10.5□□□□□ -0.73
IRF3-230ENST00000601809 TSPEAR-AS2P59090 65 aa10.5□□□□□ -0.73
IRF3-230ENST00000601809 PRR26Q8N8Z3 221 aa10.48□□□□□ -0.73
IRF3-230ENST00000601809 NKAPP1Q8N9T2 125 aa10.48□□□□□ -0.73
IRF3-230ENST00000601809 UBR4Q5T4S7 5183 aa10.47□□□□□ -0.73
IRF3-230ENST00000601809 IGLV1-50A0A075B6I6 118 aa10.47□□□□□ -0.73
IRF3-230ENST00000601809 PLNP26678 52 aa10.47□□□□□ -0.73
IRF3-230ENST00000601809 DPM2O94777 84 aa10.46□□□□□ -0.73
IRF3-230ENST00000601809 HERV-K104P63124 156 aa10.46□□□□□ -0.73
IRF3-230ENST00000601809 PMCHL2Q9BQD1 86 aa10.46□□□□□ -0.73
IRF3-230ENST00000601809 NDUFA12Q9UI09 145 aa10.46□□□□□ -0.73
IRF3-230ENST00000601809 LRP2P98164 4655 aa10.46□□□□□ -0.74
IRF3-230ENST00000601809 LEPROTO15243 131 aa10.45□□□□□ -0.74
IRF3-230ENST00000601809 SMIM13P0DJ93 91 aa10.45□□□□□ -0.74
IRF3-230ENST00000601809 LINC00158P58513 81 aa10.45□□□□□ -0.74
IRF3-230ENST00000601809 IGKV2-28A0A075B6P5 120 aa10.44□□□□□ -0.74
IRF3-230ENST00000601809 A0A0U1RRA0 63 aa10.44□□□□□ -0.74
IRF3-230ENST00000601809 IGKV2D-28P01615 120 aa10.44□□□□□ -0.74
IRF3-230ENST00000601809 IGKCP01834 107 aa10.44□□□□□ -0.74
IRF3-230ENST00000601809 RPL24P83731 157 aaKnown RBP10.44□□□□□ -0.74
IRF3-230ENST00000601809 RPL28P46779 137 aaKnown RBP10.43□□□□□ -0.74
IRF3-230ENST00000601809 COA6Q5JTJ3 125 aaKnown RBP10.43□□□□□ -0.74
IRF3-230ENST00000601809 MIR7-3HGQ8N6C7 128 aa10.42□□□□□ -0.74
IRF3-230ENST00000601809 PLEKHB2Q96CS7 222 aa10.42□□□□□ -0.74
IRF3-230ENST00000601809 MAP1LC3CQ9BXW4 147 aa10.42□□□□□ -0.74
IRF3-230ENST00000601809 MYMXA0A1B0GTQ4 84 aa10.41□□□□□ -0.74
IRF3-230ENST00000601809 SYS1-DBNDD2H3BUS1 97 aa10.41□□□□□ -0.74
IRF3-230ENST00000601809 J3QQQ9 107 aa10.41□□□□□ -0.74
IRF3-230ENST00000601809 M0R378 163 aa10.41□□□□□ -0.74
IRF3-230ENST00000601809 LOC107984156A0A0G2JMH3 177 aa10.4□□□□□ -0.74
IRF3-230ENST00000601809 TMEM238C9JI98 176 aa10.4□□□□□ -0.74
IRF3-230ENST00000601809 MEIG1Q5JSS6 88 aa10.4□□□□□ -0.74
IRF3-230ENST00000601809 ARL17AQ8IVW1 177 aa10.4□□□□□ -0.74
IRF3-230ENST00000601809 TMEM126AQ9H061 195 aa10.4□□□□□ -0.74
IRF3-230ENST00000601809 LINC01545Q5VT33 79 aa10.39□□□□□ -0.75
IRF3-230ENST00000601809 LINC00587B1AMM8 73 aa10.38□□□□□ -0.75
IRF3-230ENST00000601809 E9PLD3 99 aa10.37□□□□□ -0.75
IRF3-230ENST00000601809 NMUP48645 174 aa10.37□□□□□ -0.75
IRF3-230ENST00000601809 HERVK_113P61574 105 aa10.37□□□□□ -0.75
IRF3-230ENST00000601809 A0A087X002 238 aa10.36□□□□□ -0.75
IRF3-230ENST00000601809 BOD1L2Q8IYS8 172 aa10.36□□□□□ -0.75
IRF3-230ENST00000601809 RPL13AP40429 203 aaKnown RBP10.35□□□□□ -0.75
IRF3-230ENST00000601809 UBE2AP49459 152 aa10.35□□□□□ -0.75
IRF3-230ENST00000601809 PRLHP81277 87 aa10.35□□□□□ -0.75
IRF3-230ENST00000601809 PET117Q6UWS5 81 aa10.35□□□□□ -0.75
IRF3-230ENST00000601809 C3orf79P0CE67 100 aa10.34□□□□□ -0.75
IRF3-230ENST00000601809 DAND5Q8N907 189 aa10.34□□□□□ -0.75
IRF3-230ENST00000601809 IGKV2D-26A0A0A0MRZ7 120 aa10.33□□□□□ -0.76
IRF3-230ENST00000601809 KRTAP4-16G5E9R7 235 aaPredicted RBP10.33□□□□□ -0.76
IRF3-230ENST00000601809 LGALS3P17931 250 aaKnown RBP10.33□□□□□ -0.76
IRF3-230ENST00000601809 SPRR1AP35321 89 aa10.33□□□□□ -0.76
IRF3-230ENST00000601809 LPAP08519 4548 aa10.32□□□□□ -0.76
IRF3-230ENST00000601809 ATP6V1G1O75348 118 aa10.32□□□□□ -0.76
IRF3-230ENST00000601809 FAM19A1Q7Z5A9 133 aa10.32□□□□□ -0.76
IRF3-230ENST00000601809 ANAPC11Q9NYG5 84 aa10.32□□□□□ -0.76
IRF3-230ENST00000601809 A0A0J9YXY3 114 aa10.31□□□□□ -0.76
IRF3-230ENST00000601809 NCR3O14931 201 aa10.31□□□□□ -0.76
IRF3-230ENST00000601809 EIF4EBP3O60516 100 aaPredicted RBP10.31□□□□□ -0.76
IRF3-230ENST00000601809 KRTAP13-2Q52LG2 175 aa10.31□□□□□ -0.76
IRF3-230ENST00000601809 ADAMTSL4-AS1Q5T5F5 129 aa10.31□□□□□ -0.76
IRF3-230ENST00000601809 SOSTDC1Q6X4U4 206 aa10.31□□□□□ -0.76
IRF3-230ENST00000601809 KCNQ1DNQ9H478 68 aa10.31□□□□□ -0.76
IRF3-230ENST00000601809 PRYO14603 147 aa10.3□□□□□ -0.76
IRF3-230ENST00000601809 LITAFQ99732 161 aa10.3□□□□□ -0.76
IRF3-230ENST00000601809 TRBV10-3A0A0K0K1G6 114 aa10.29□□□□□ -0.76
IRF3-230ENST00000601809 TRBV10-2A0A0K0K1G8 114 aa10.28□□□□□ -0.76
IRF3-230ENST00000601809 FAM229BQ4G0N7 80 aa10.28□□□□□ -0.76
IRF3-230ENST00000601809 LINC00337Q8N6G1 96 aa10.28□□□□□ -0.76
IRF3-230ENST00000601809 NDUFC2O95298 119 aa10.27□□□□□ -0.77
IRF3-230ENST00000601809 CRYGAP11844 174 aa10.27□□□□□ -0.77
IRF3-230ENST00000601809 S100A1P23297 94 aa10.26□□□□□ -0.77
IRF3-230ENST00000601809 KRTDAPP60985 99 aa10.25□□□□□ -0.77
IRF3-230ENST00000601809 TTTY13Q9BZ97 58 aa10.25□□□□□ -0.77
IRF3-230ENST00000601809 TIMM17BO60830 172 aa10.24□□□□□ -0.77
IRF3-230ENST00000601809 SPANXB1Q9NS25 103 aaPredicted RBP10.24□□□□□ -0.77
IRF3-230ENST00000601809 IGLV6-57P01721 117 aa10.23□□□□□ -0.77
IRF3-230ENST00000601809 TYMSOSQ8TAI1 123 aa10.23□□□□□ -0.77
IRF3-230ENST00000601809 DDTP30046 118 aa10.22□□□□□ -0.77
IRF3-230ENST00000601809 SMCR5Q8TEV8 140 aa10.22□□□□□ -0.77
IRF3-230ENST00000601809 SPRR4Q96PI1 79 aa10.22□□□□□ -0.77
IRF3-230ENST00000601809 HIGD2AQ9BW72 106 aa10.22□□□□□ -0.77
IRF3-230ENST00000601809 ZNF815PA8K554 130 aa10.2□□□□□ -0.78
IRF3-230ENST00000601809 B5MCH6 92 aa10.2□□□□□ -0.78
IRF3-230ENST00000601809 NPC2P61916 151 aa10.2□□□□□ -0.78
IRF3-230ENST00000601809 ANKRD39Q53RE8 183 aa10.2□□□□□ -0.78
IRF3-230ENST00000601809 HIST3H2BBQ8N257 126 aa10.2□□□□□ -0.78
IRF3-230ENST00000601809 LINC00308Q8TCZ7 52 aa10.2□□□□□ -0.78
IRF3-230ENST00000601809 MIEN1Q9BRT3 115 aa10.2□□□□□ -0.78
IRF3-230ENST00000601809 RNF213Q63HN8 5207 aa10.19□□□□□ -0.78
IRF3-230ENST00000601809 ETDCA0A1B0GVM5 59 aa10.17□□□□□ -0.78
IRF3-230ENST00000601809 C3orf22Q8N5N4 141 aa10.17□□□□□ -0.78
IRF3-230ENST00000601809 HIST1H2BLQ99880 126 aa10.17□□□□□ -0.78
IRF3-230ENST00000601809 Q9BRP9 147 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms