RNA–Protein interactions for RNA: ENST00000598594.1

PAF1-208, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene PAF1, Length 280 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-208ENST00000598594 C10orf99Q6UWK7 81 aa2.59□□□□□ -1.99
PAF1-208ENST00000598594 Q6ZRX8 168 aa2.59□□□□□ -1.99
PAF1-208ENST00000598594 SMIM11BQ8TCY0 68 aa2.59□□□□□ -1.99
PAF1-208ENST00000598594 G3V318 75 aa2.58□□□□□ -2
PAF1-208ENST00000598594 PLAC4Q8WY50 150 aa2.58□□□□□ -2
PAF1-208ENST00000598594 LRRC37AA6NMS7 1700 aa2.58□□□□□ -2
PAF1-208ENST00000598594 NDUFA4O00483 81 aa2.57□□□□□ -2
PAF1-208ENST00000598594 NCR3O14931 201 aa2.57□□□□□ -2
PAF1-208ENST00000598594 GVQW2A0A096LPI5 108 aaPredicted RBP2.56□□□□□ -2
PAF1-208ENST00000598594 COX7BP24311 80 aa2.56□□□□□ -2
PAF1-208ENST00000598594 KRTAP5-1Q6L8H4 278 aa2.56□□□□□ -2
PAF1-208ENST00000598594 TNCP24821 2201 aa2.54□□□□□ -2
PAF1-208ENST00000598594 A0A096LNT2 108 aa2.54□□□□□ -2
PAF1-208ENST00000598594 SSBP3-AS1Q7Z2R9 100 aa2.54□□□□□ -2
PAF1-208ENST00000598594 NFAT5O94916 1531 aa2.53□□□□□ -2
PAF1-208ENST00000598594 UNQ6190/PRO20217Q6UXQ8 127 aa2.53□□□□□ -2
PAF1-208ENST00000598594 ABRACLQ9P1F3 81 aa2.53□□□□□ -2
PAF1-208ENST00000598594 IQGAP1P46940 1657 aa2.52□□□□□ -2.01
PAF1-208ENST00000598594 TECTAO75443 2155 aa2.51□□□□□ -2.01
PAF1-208ENST00000598594 M0R1W7 72 aa2.51□□□□□ -2.01
PAF1-208ENST00000598594 LY6G6CO95867 125 aa2.51□□□□□ -2.01
PAF1-208ENST00000598594 KRTAP12-2P59991 146 aa2.51□□□□□ -2.01
PAF1-208ENST00000598594 ASCC3Q8N3C0 2202 aaKnown RBP2.51□□□□□ -2.01
PAF1-208ENST00000598594 DEPDC5O75140 1603 aa2.5□□□□□ -2.01
PAF1-208ENST00000598594 ARL14EPLP0DKL9 152 aa2.5□□□□□ -2.01
PAF1-208ENST00000598594 KRTAP13-4Q3LI77 160 aa2.5□□□□□ -2.01
PAF1-208ENST00000598594 KRTAP5-4Q6L8H1 288 aa2.5□□□□□ -2.01
PAF1-208ENST00000598594 C4AP0C0L4 1744 aa2.5□□□□□ -2.01
PAF1-208ENST00000598594 TULP4Q9NRJ4 1543 aa2.49□□□□□ -2.01
PAF1-208ENST00000598594 PIN1P1O15428 100 aa2.49□□□□□ -2.01
PAF1-208ENST00000598594 KRTAP5-9P26371 169 aa2.49□□□□□ -2.01
PAF1-208ENST00000598594 PLNP26678 52 aa2.49□□□□□ -2.01
PAF1-208ENST00000598594 SERF2P84101 59 aa2.49□□□□□ -2.01
PAF1-208ENST00000598594 SPINK13Q1W4C9 94 aa2.49□□□□□ -2.01
PAF1-208ENST00000598594 LINC00575Q6W349 94 aa2.49□□□□□ -2.01
PAF1-208ENST00000598594 URB1O60287 2271 aaKnown RBP2.48□□□□□ -2.01
PAF1-208ENST00000598594 RPL38P63173 70 aaKnown RBP2.48□□□□□ -2.01
PAF1-208ENST00000598594 DEFB103AP81534 67 aa2.48□□□□□ -2.01
PAF1-208ENST00000598594 KIF21BO75037 1637 aa2.48□□□□□ -2.01
PAF1-208ENST00000598594 SMIM27A0A1W2PRY6 76 aa2.47□□□□□ -2.01
PAF1-208ENST00000598594 PRB2P02812 416 aaPredicted RBP2.47□□□□□ -2.01
PAF1-208ENST00000598594 BRD3OSQ6XYD6 125 aa2.47□□□□□ -2.01
PAF1-208ENST00000598594 C4BP0C0L5 1744 aa2.47□□□□□ -2.01
PAF1-208ENST00000598594 I3L3M4 83 aa2.46□□□□□ -2.02
PAF1-208ENST00000598594 DEFB114Q30KQ6 69 aa2.46□□□□□ -2.02
PAF1-208ENST00000598594 KRTAP4-4Q9BYR3 166 aa2.46□□□□□ -2.02
PAF1-208ENST00000598594 ASXL3Q9C0F0 2248 aa2.45□□□□□ -2.02
PAF1-208ENST00000598594 IGIPA6NJ69 53 aa2.45□□□□□ -2.02
PAF1-208ENST00000598594 CPSF4LA6NMK7 179 aaKnown RBP2.45□□□□□ -2.02
PAF1-208ENST00000598594 KRTAP10-1P60331 282 aa2.45□□□□□ -2.02
PAF1-208ENST00000598594 RPL37P61927 97 aaKnown RBP2.45□□□□□ -2.02
PAF1-208ENST00000598594 LCE3CQ5T5A8 94 aa2.45□□□□□ -2.02
PAF1-208ENST00000598594 KCNQ1DNQ9H478 68 aa2.45□□□□□ -2.02
PAF1-208ENST00000598594 TNRC6CQ9HCJ0 1690 aaKnown RBP2.44□□□□□ -2.02
PAF1-208ENST00000598594 CACNA1GO43497 2377 aa2.44□□□□□ -2.02
PAF1-208ENST00000598594 SPRR5A0A1B0GTR4 108 aa2.44□□□□□ -2.02
PAF1-208ENST00000598594 MROH2BQ7Z745 1585 aa2.44□□□□□ -2.02
PAF1-208ENST00000598594 ATP7AQ04656 1500 aa2.43□□□□□ -2.02
PAF1-208ENST00000598594 ETDCA0A1B0GVM5 59 aa2.43□□□□□ -2.02
PAF1-208ENST00000598594 KRTAP10-3P60369 221 aa2.43□□□□□ -2.02
PAF1-208ENST00000598594 KRTAP10-5P60370 271 aa2.43□□□□□ -2.02
PAF1-208ENST00000598594 KNTC1P50748 2209 aa2.43□□□□□ -2.02
PAF1-208ENST00000598594 SPTY2D1-AS1A0A0U1RR47 76 aa2.42□□□□□ -2.02
PAF1-208ENST00000598594 PRB1P04280 392 aa2.42□□□□□ -2.02
PAF1-208ENST00000598594 COX6B1P14854 86 aa2.42□□□□□ -2.02
PAF1-208ENST00000598594 KRTAP10-12P60413 245 aa2.42□□□□□ -2.02
PAF1-208ENST00000598594 UBE2DNLQ8IWF7 75 aa2.41□□□□□ -2.02
PAF1-208ENST00000598594 TIMM8BQ9Y5J9 83 aaPredicted RBP2.41□□□□□ -2.02
PAF1-208ENST00000598594 ANKRD17O75179 2603 aaKnown RBP2.4□□□□□ -2.02
PAF1-208ENST00000598594 BAHCC1Q9P281 2608 aa2.4□□□□□ -2.03
PAF1-208ENST00000598594 AHCTF1Q8WYP5 2266 aa2.39□□□□□ -2.03
PAF1-208ENST00000598594 CACNA1BQ00975 2339 aa2.39□□□□□ -2.03
PAF1-208ENST00000598594 ANGP03950 147 aaKnown RBP2.38□□□□□ -2.03
PAF1-208ENST00000598594 PCOTHQ58A44 107 aa2.38□□□□□ -2.03
PAF1-208ENST00000598594 LINC01546A6NGU7 62 aa2.37□□□□□ -2.03
PAF1-208ENST00000598594 SPINK4O60575 86 aa2.37□□□□□ -2.03
PAF1-208ENST00000598594 ZDBF2Q9HCK1 2354 aa2.37□□□□□ -2.03
PAF1-208ENST00000598594 MRPL33O75394 65 aaKnown RBP2.36□□□□□ -2.03
PAF1-208ENST00000598594 SAMD9LQ8IVG5 1584 aa2.35□□□□□ -2.03
PAF1-208ENST00000598594 DEFB131BA0A096LNP1 70 aa2.34□□□□□ -2.03
PAF1-208ENST00000598594 A0A1B0GVY2 172 aa2.34□□□□□ -2.03
PAF1-208ENST00000598594 KRTAP9-6A8MVA2 160 aa2.34□□□□□ -2.03
PAF1-208ENST00000598594 LMO7Q8WWI1 1683 aa2.34□□□□□ -2.04
PAF1-208ENST00000598594 H0YGX0 51 aa2.33□□□□□ -2.04
PAF1-208ENST00000598594 CRIPTQ9P021 101 aa2.33□□□□□ -2.04
PAF1-208ENST00000598594 CRIP1P50238 77 aa2.32□□□□□ -2.04
PAF1-208ENST00000598594 NOTCH3Q9UM47 2321 aa2.31□□□□□ -2.04
PAF1-208ENST00000598594 NDUFA3O95167 84 aa2.31□□□□□ -2.04
PAF1-208ENST00000598594 GCC2Q8IWJ2 1684 aa2.31□□□□□ -2.04
PAF1-208ENST00000598594 GOLGA4Q13439 2230 aaKnown RBP2.3□□□□□ -2.04
PAF1-208ENST00000598594 NAV3Q8IVL0 2385 aa2.3□□□□□ -2.04
PAF1-208ENST00000598594 OBSCNQ5VST9 7968 aa2.3□□□□□ -2.04
PAF1-208ENST00000598594 KRTAP12-1P59990 96 aa2.3□□□□□ -2.04
PAF1-208ENST00000598594 BPTFQ12830 3046 aa2.29□□□□□ -2.04
PAF1-208ENST00000598594 DUOX1Q9NRD9 1551 aa2.29□□□□□ -2.04
PAF1-208ENST00000598594 TP53AIP1Q9HCN2 124 aa2.29□□□□□ -2.04
PAF1-208ENST00000598594 FLG2Q5D862 2391 aaPredicted RBP2.29□□□□□ -2.04
PAF1-208ENST00000598594 CNOT1A5YKK6 2376 aaKnown RBP2.28□□□□□ -2.05
PAF1-208ENST00000598594 K7EIL1 84 aa2.27□□□□□ -2.05
PAF1-208ENST00000598594 SNRPGP62308 76 aaKnown RBP2.27□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 226.5 ms