RNA–Protein interactions for RNA: ENST00000597995.1

TRIM28-212, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 702 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-212ENST00000597995 KRTAP13-1Q8IUC0 172 aa7.33□□□□□ -1.24
TRIM28-212ENST00000597995 FAM19A2Q8N3H0 131 aa7.33□□□□□ -1.24
TRIM28-212ENST00000597995 TMEM223A0PJW6 202 aa7.32□□□□□ -1.24
TRIM28-212ENST00000597995 H0Y8G0 127 aa7.32□□□□□ -1.24
TRIM28-212ENST00000597995 TRGC2P03986 189 aa7.32□□□□□ -1.24
TRIM28-212ENST00000597995 COX17Q14061 63 aa7.32□□□□□ -1.24
TRIM28-212ENST00000597995 NKAPP1Q8N9T2 125 aa7.31□□□□□ -1.24
TRIM28-212ENST00000597995 FAT4Q6V0I7 4981 aa7.3□□□□□ -1.24
TRIM28-212ENST00000597995 IGKV2-28A0A075B6P5 120 aa7.3□□□□□ -1.24
TRIM28-212ENST00000597995 IGKV2D-28P01615 120 aa7.3□□□□□ -1.24
TRIM28-212ENST00000597995 CTAG1AP78358 180 aa7.29□□□□□ -1.24
TRIM28-212ENST00000597995 FAM229BQ4G0N7 80 aa7.29□□□□□ -1.24
TRIM28-212ENST00000597995 ANAPC11Q9NYG5 84 aa7.29□□□□□ -1.24
TRIM28-212ENST00000597995 COLCA2A8K830 154 aa7.28□□□□□ -1.24
TRIM28-212ENST00000597995 TMEM238C9JI98 176 aa7.28□□□□□ -1.24
TRIM28-212ENST00000597995 KRTAP13-2Q52LG2 175 aa7.28□□□□□ -1.24
TRIM28-212ENST00000597995 A0A0U1RRA0 63 aa7.27□□□□□ -1.25
TRIM28-212ENST00000597995 SERF1AO75920 110 aa7.27□□□□□ -1.25
TRIM28-212ENST00000597995 LINC00158P58513 81 aa7.27□□□□□ -1.25
TRIM28-212ENST00000597995 TPRXLQ17RH7 258 aa7.27□□□□□ -1.25
TRIM28-212ENST00000597995 LINC00304Q8N9R0 145 aa7.27□□□□□ -1.25
TRIM28-212ENST00000597995 M0R378 163 aa7.26□□□□□ -1.25
TRIM28-212ENST00000597995 ATP6V1G1O75348 118 aa7.26□□□□□ -1.25
TRIM28-212ENST00000597995 LEPROTL1O95214 131 aa7.26□□□□□ -1.25
TRIM28-212ENST00000597995 SMIM13P0DJ93 91 aa7.26□□□□□ -1.25
TRIM28-212ENST00000597995 UBE2AP49459 152 aa7.26□□□□□ -1.25
TRIM28-212ENST00000597995 PRLHP81277 87 aa7.26□□□□□ -1.25
TRIM28-212ENST00000597995 RPL24P83731 157 aaKnown RBP7.26□□□□□ -1.25
TRIM28-212ENST00000597995 TMEM126AQ9H061 195 aa7.26□□□□□ -1.25
TRIM28-212ENST00000597995 TSPEAR-AS2P59090 65 aa7.25□□□□□ -1.25
TRIM28-212ENST00000597995 RETNLBQ9BQ08 111 aa7.25□□□□□ -1.25
TRIM28-212ENST00000597995 CDIP1Q9H305 208 aa7.25□□□□□ -1.25
TRIM28-212ENST00000597995 HSPB8Q9UJY1 196 aa7.25□□□□□ -1.25
TRIM28-212ENST00000597995 IGLV7-46A0A075B6I9 117 aa7.24□□□□□ -1.25
TRIM28-212ENST00000597995 KRTAP9-6A0A140TA67 174 aa7.24□□□□□ -1.25
TRIM28-212ENST00000597995 FABP4P15090 132 aa7.24□□□□□ -1.25
TRIM28-212ENST00000597995 IGKV2D-26A0A0A0MRZ7 120 aa7.23□□□□□ -1.25
TRIM28-212ENST00000597995 FAM19A1Q7Z5A9 133 aa7.23□□□□□ -1.25
TRIM28-212ENST00000597995 MEIG1Q5JSS6 88 aa7.22□□□□□ -1.25
TRIM28-212ENST00000597995 MIR7-3HGQ8N6C7 128 aa7.22□□□□□ -1.25
TRIM28-212ENST00000597995 NDUFA12Q9UI09 145 aa7.22□□□□□ -1.25
TRIM28-212ENST00000597995 MUC17Q685J3 4493 aa7.22□□□□□ -1.25
TRIM28-212ENST00000597995 HERVK_113P61574 105 aa7.21□□□□□ -1.26
TRIM28-212ENST00000597995 HERV-K104P63124 156 aa7.21□□□□□ -1.26
TRIM28-212ENST00000597995 PMCHL2Q9BQD1 86 aa7.21□□□□□ -1.26
TRIM28-212ENST00000597995 LINC00587B1AMM8 73 aa7.2□□□□□ -1.26
TRIM28-212ENST00000597995 LEPROTO15243 131 aa7.2□□□□□ -1.26
TRIM28-212ENST00000597995 PLNP26678 52 aa7.2□□□□□ -1.26
TRIM28-212ENST00000597995 BOD1L2Q8IYS8 172 aa7.2□□□□□ -1.26
TRIM28-212ENST00000597995 PLEKHB2Q96CS7 222 aa7.2□□□□□ -1.26
TRIM28-212ENST00000597995 MAP1LC3CQ9BXW4 147 aa7.2□□□□□ -1.26
TRIM28-212ENST00000597995 MYMXA0A1B0GTQ4 84 aa7.19□□□□□ -1.26
TRIM28-212ENST00000597995 NCR3O14931 201 aa7.18□□□□□ -1.26
TRIM28-212ENST00000597995 DPM2O94777 84 aa7.18□□□□□ -1.26
TRIM28-212ENST00000597995 DAND5Q8N907 189 aa7.18□□□□□ -1.26
TRIM28-212ENST00000597995 PPDPFQ9H3Y8 114 aa7.18□□□□□ -1.26
TRIM28-212ENST00000597995 KRTAP4-16G5E9R7 235 aaPredicted RBP7.17□□□□□ -1.26
TRIM28-212ENST00000597995 J3QQQ9 107 aa7.17□□□□□ -1.26
TRIM28-212ENST00000597995 SPRR1AP35321 89 aa7.17□□□□□ -1.26
TRIM28-212ENST00000597995 SPAG11AQ6PDA7 123 aa7.17□□□□□ -1.26
TRIM28-212ENST00000597995 LOC107984156A0A0G2JMH3 177 aa7.16□□□□□ -1.26
TRIM28-212ENST00000597995 HIST1H2BKO60814 126 aa7.16□□□□□ -1.26
TRIM28-212ENST00000597995 IGKCP01834 107 aa7.16□□□□□ -1.26
TRIM28-212ENST00000597995 HIST1H2BJP06899 126 aa7.16□□□□□ -1.26
TRIM28-212ENST00000597995 LGALS3P17931 250 aaKnown RBP7.16□□□□□ -1.26
TRIM28-212ENST00000597995 HIST1H2BOP23527 126 aa7.16□□□□□ -1.26
TRIM28-212ENST00000597995 HIST1H2BBP33778 126 aa7.16□□□□□ -1.26
TRIM28-212ENST00000597995 HIST1H2BDP58876 126 aa7.16□□□□□ -1.26
TRIM28-212ENST00000597995 HIST1H2BCP62807 126 aa7.16□□□□□ -1.26
TRIM28-212ENST00000597995 HIST2H2BEQ16778 126 aa7.16□□□□□ -1.26
TRIM28-212ENST00000597995 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.16□□□□□ -1.26
TRIM28-212ENST00000597995 ARL17AQ8IVW1 177 aa7.16□□□□□ -1.26
TRIM28-212ENST00000597995 HIST1H2BHQ93079 126 aa7.16□□□□□ -1.26
TRIM28-212ENST00000597995 HIST1H2BNQ99877 126 aa7.16□□□□□ -1.26
TRIM28-212ENST00000597995 HIST1H2BMQ99879 126 aa7.16□□□□□ -1.26
TRIM28-212ENST00000597995 HIGD2AQ9BW72 106 aa7.16□□□□□ -1.26
TRIM28-212ENST00000597995 KCNQ1DNQ9H478 68 aa7.16□□□□□ -1.26
TRIM28-212ENST00000597995 TRBV10-3A0A0K0K1G6 114 aa7.15□□□□□ -1.26
TRIM28-212ENST00000597995 PRYO14603 147 aa7.15□□□□□ -1.26
TRIM28-212ENST00000597995 FP248Q71RG6 208 aaPredicted RBP7.15□□□□□ -1.26
TRIM28-212ENST00000597995 C3orf22Q8N5N4 141 aa7.15□□□□□ -1.26
TRIM28-212ENST00000597995 EIF4EBP3O60516 100 aaPredicted RBP7.14□□□□□ -1.27
TRIM28-212ENST00000597995 LINC00337Q8N6G1 96 aa7.14□□□□□ -1.27
TRIM28-212ENST00000597995 SPRR4Q96PI1 79 aa7.14□□□□□ -1.27
TRIM28-212ENST00000597995 MIEN1Q9BRT3 115 aa7.14□□□□□ -1.27
TRIM28-212ENST00000597995 NMUP48645 174 aa7.13□□□□□ -1.27
TRIM28-212ENST00000597995 SOSTDC1Q6X4U4 206 aa7.13□□□□□ -1.27
TRIM28-212ENST00000597995 E9PLD3 99 aa7.12□□□□□ -1.27
TRIM28-212ENST00000597995 SYS1-DBNDD2H3BUS1 97 aa7.12□□□□□ -1.27
TRIM28-212ENST00000597995 S100A12P80511 92 aa7.12□□□□□ -1.27
TRIM28-212ENST00000597995 ADAMTSL4-AS1Q5T5F5 129 aa7.12□□□□□ -1.27
TRIM28-212ENST00000597995 SMCR5Q8TEV8 140 aa7.12□□□□□ -1.27
TRIM28-212ENST00000597995 A0A0J9YXY3 114 aa7.11□□□□□ -1.27
TRIM28-212ENST00000597995 C4orf48Q5BLP8 95 aa7.11□□□□□ -1.27
TRIM28-212ENST00000597995 TRBV10-2A0A0K0K1G8 114 aa7.1□□□□□ -1.27
TRIM28-212ENST00000597995 ZNF706Q9Y5V0 76 aaPredicted RBP7.1□□□□□ -1.27
TRIM28-212ENST00000597995 ETDCA0A1B0GVM5 59 aa7.09□□□□□ -1.27
TRIM28-212ENST00000597995 B5MCH6 92 aa7.09□□□□□ -1.27
TRIM28-212ENST00000597995 ERC2-IT1O76042 136 aa7.09□□□□□ -1.27
TRIM28-212ENST00000597995 DDTP30046 118 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 220.3 ms