RNA–Protein interactions for RNA: ENST00000596482.5

HOMER3-209, Transcript of homer scaffold protein 3, humanhuman

TSL 5

Gene HOMER3, Length 866 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-209ENST00000596482 HERV-K104P63124 156 aa11.62□□□□□ -0.55
HOMER3-209ENST00000596482 HIST2H2BEQ16778 126 aa11.62□□□□□ -0.55
HOMER3-209ENST00000596482 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.62□□□□□ -0.55
HOMER3-209ENST00000596482 HIST1H2BHQ93079 126 aa11.62□□□□□ -0.55
HOMER3-209ENST00000596482 HIST1H2BNQ99877 126 aa11.62□□□□□ -0.55
HOMER3-209ENST00000596482 HIST1H2BMQ99879 126 aa11.62□□□□□ -0.55
HOMER3-209ENST00000596482 MAP1LC3CQ9BXW4 147 aa11.62□□□□□ -0.55
HOMER3-209ENST00000596482 ATP6V1G1O75348 118 aa11.61□□□□□ -0.55
HOMER3-209ENST00000596482 VPREB1P12018 145 aa11.61□□□□□ -0.55
HOMER3-209ENST00000596482 KRTAP10-8P60410 259 aa11.61□□□□□ -0.55
HOMER3-209ENST00000596482 NDUFA12Q9UI09 145 aa11.61□□□□□ -0.55
HOMER3-209ENST00000596482 A0A0U1RRA0 63 aa11.6□□□□□ -0.55
HOMER3-209ENST00000596482 RPL28P46779 137 aaKnown RBP11.6□□□□□ -0.55
HOMER3-209ENST00000596482 TNXBP22105 4242 aa11.6□□□□□ -0.55
HOMER3-209ENST00000596482 IGKV2-28A0A075B6P5 120 aa11.59□□□□□ -0.55
HOMER3-209ENST00000596482 MYMXA0A1B0GTQ4 84 aa11.59□□□□□ -0.55
HOMER3-209ENST00000596482 LINC00587B1AMM8 73 aa11.59□□□□□ -0.55
HOMER3-209ENST00000596482 IGKV2D-28P01615 120 aa11.59□□□□□ -0.55
HOMER3-209ENST00000596482 IGKCP01834 107 aa11.59□□□□□ -0.55
HOMER3-209ENST00000596482 PLEKHB2Q96CS7 222 aa11.59□□□□□ -0.55
HOMER3-209ENST00000596482 PMCHL2Q9BQD1 86 aa11.59□□□□□ -0.55
HOMER3-209ENST00000596482 LEPROTO15243 131 aa11.58□□□□□ -0.56
HOMER3-209ENST00000596482 SMIM13P0DJ93 91 aa11.58□□□□□ -0.56
HOMER3-209ENST00000596482 HMCN2Q8NDA2 5059 aa11.56□□□□□ -0.56
HOMER3-209ENST00000596482 IGLV1-50A0A075B6I6 118 aa11.56□□□□□ -0.56
HOMER3-209ENST00000596482 UBE2AP49459 152 aa11.56□□□□□ -0.56
HOMER3-209ENST00000596482 TSPEAR-AS2P59090 65 aa11.56□□□□□ -0.56
HOMER3-209ENST00000596482 PRR26Q8N8Z3 221 aa11.56□□□□□ -0.56
HOMER3-209ENST00000596482 LGALS3P17931 250 aaKnown RBP11.55□□□□□ -0.56
HOMER3-209ENST00000596482 MIR7-3HGQ8N6C7 128 aa11.55□□□□□ -0.56
HOMER3-209ENST00000596482 J3QQQ9 107 aa11.54□□□□□ -0.56
HOMER3-209ENST00000596482 KRTAP1-4P0C5Y4 121 aa11.54□□□□□ -0.56
HOMER3-209ENST00000596482 Q8NDZ9 215 aa11.54□□□□□ -0.56
HOMER3-209ENST00000596482 NMUP48645 174 aa11.53□□□□□ -0.56
HOMER3-209ENST00000596482 SYS1-DBNDD2H3BUS1 97 aa11.52□□□□□ -0.57
HOMER3-209ENST00000596482 RPL13AP40429 203 aaKnown RBP11.52□□□□□ -0.57
HOMER3-209ENST00000596482 BOD1L2Q8IYS8 172 aa11.52□□□□□ -0.57
HOMER3-209ENST00000596482 TMEM126AQ9H061 195 aa11.51□□□□□ -0.57
HOMER3-209ENST00000596482 TMEM238C9JI98 176 aa11.5□□□□□ -0.57
HOMER3-209ENST00000596482 M0R378 163 aa11.5□□□□□ -0.57
HOMER3-209ENST00000596482 FAM19A1Q7Z5A9 133 aa11.5□□□□□ -0.57
HOMER3-209ENST00000596482 NCR3O14931 201 aa11.48□□□□□ -0.57
HOMER3-209ENST00000596482 KRTAP13-1Q8IUC0 172 aa11.48□□□□□ -0.57
HOMER3-209ENST00000596482 E9PLD3 99 aa11.47□□□□□ -0.57
HOMER3-209ENST00000596482 PRLHP81277 87 aa11.47□□□□□ -0.57
HOMER3-209ENST00000596482 PET117Q6UWS5 81 aa11.47□□□□□ -0.57
HOMER3-209ENST00000596482 IGKV2D-26A0A0A0MRZ7 120 aa11.46□□□□□ -0.57
HOMER3-209ENST00000596482 COA6Q5JTJ3 125 aaKnown RBP11.46□□□□□ -0.57
HOMER3-209ENST00000596482 LINC01545Q5VT33 79 aa11.46□□□□□ -0.57
HOMER3-209ENST00000596482 DAND5Q8N907 189 aa11.46□□□□□ -0.57
HOMER3-209ENST00000596482 MIEN1Q9BRT3 115 aa11.46□□□□□ -0.57
HOMER3-209ENST00000596482 PRYO14603 147 aa11.43□□□□□ -0.58
HOMER3-209ENST00000596482 KRTDAPP60985 99 aa11.43□□□□□ -0.58
HOMER3-209ENST00000596482 C3orf79P0CE67 100 aa11.42□□□□□ -0.58
HOMER3-209ENST00000596482 S100A12P80511 92 aa11.42□□□□□ -0.58
HOMER3-209ENST00000596482 C20orf202A1L168 122 aa11.41□□□□□ -0.58
HOMER3-209ENST00000596482 CRYGAP11844 174 aa11.41□□□□□ -0.58
HOMER3-209ENST00000596482 S100A1P23297 94 aa11.41□□□□□ -0.58
HOMER3-209ENST00000596482 A0A0J9YXY3 114 aa11.4□□□□□ -0.58
HOMER3-209ENST00000596482 LOC107984156A0A0G2JMH3 177 aa11.39□□□□□ -0.59
HOMER3-209ENST00000596482 ARL17AQ8IVW1 177 aa11.39□□□□□ -0.59
HOMER3-209ENST00000596482 HIGD2AQ9BW72 106 aa11.39□□□□□ -0.59
HOMER3-209ENST00000596482 SPANXB1Q9NS25 103 aaPredicted RBP11.39□□□□□ -0.59
HOMER3-209ENST00000596482 A0A087X002 238 aa11.38□□□□□ -0.59
HOMER3-209ENST00000596482 TRBV10-3A0A0K0K1G6 114 aa11.38□□□□□ -0.59
HOMER3-209ENST00000596482 TRBV10-2A0A0K0K1G8 114 aa11.38□□□□□ -0.59
HOMER3-209ENST00000596482 FAM229BQ4G0N7 80 aa11.37□□□□□ -0.59
HOMER3-209ENST00000596482 TYMSOSQ8TAI1 123 aa11.37□□□□□ -0.59
HOMER3-209ENST00000596482 KCNQ1DNQ9H478 68 aa11.37□□□□□ -0.59
HOMER3-209ENST00000596482 ETDCA0A1B0GVM5 59 aa11.36□□□□□ -0.59
HOMER3-209ENST00000596482 ANAPC11Q9NYG5 84 aa11.36□□□□□ -0.59
HOMER3-209ENST00000596482 ZNF815PA8K554 130 aa11.35□□□□□ -0.59
HOMER3-209ENST00000596482 NDUFC2O95298 119 aa11.35□□□□□ -0.59
HOMER3-209ENST00000596482 DDTP30046 118 aa11.35□□□□□ -0.59
HOMER3-209ENST00000596482 NPC2P61916 151 aa11.35□□□□□ -0.59
HOMER3-209ENST00000596482 LINC00337Q8N6G1 96 aa11.35□□□□□ -0.59
HOMER3-209ENST00000596482 SPRR1AP35321 89 aa11.34□□□□□ -0.59
HOMER3-209ENST00000596482 S100A7L2Q5SY68 101 aa11.34□□□□□ -0.59
HOMER3-209ENST00000596482 AKR1D1P51857 326 aa11.33□□□□□ -0.6
HOMER3-209ENST00000596482 ADAMTSL4-AS1Q5T5F5 129 aa11.33□□□□□ -0.6
HOMER3-209ENST00000596482 TIMM17BO60830 172 aa11.32□□□□□ -0.6
HOMER3-209ENST00000596482 SOSTDC1Q6X4U4 206 aa11.32□□□□□ -0.6
HOMER3-209ENST00000596482 ZNF706Q9Y5V0 76 aaPredicted RBP11.32□□□□□ -0.6
HOMER3-209ENST00000596482 KRTAP4-16G5E9R7 235 aaPredicted RBP11.29□□□□□ -0.6
HOMER3-209ENST00000596482 S100A2P29034 98 aa11.29□□□□□ -0.6
HOMER3-209ENST00000596482 KRTAP13-2Q52LG2 175 aa11.29□□□□□ -0.6
HOMER3-209ENST00000596482 LITAFQ99732 161 aa11.29□□□□□ -0.6
HOMER3-209ENST00000596482 TTTY13Q9BZ97 58 aa11.29□□□□□ -0.6
HOMER3-209ENST00000596482 SCGB1D4Q6XE38 83 aa11.28□□□□□ -0.6
HOMER3-209ENST00000596482 ATOH7Q8N100 152 aa11.28□□□□□ -0.6
HOMER3-209ENST00000596482 SPRR4Q96PI1 79 aa11.28□□□□□ -0.6
HOMER3-209ENST00000596482 SPANXCQ9NY87 97 aa11.28□□□□□ -0.6
HOMER3-209ENST00000596482 TRAV23DV6A0A075B6W5 121 aa11.27□□□□□ -0.61
HOMER3-209ENST00000596482 EIF4EBP3O60516 100 aaPredicted RBP11.27□□□□□ -0.61
HOMER3-209ENST00000596482 IGLV6-57P01721 117 aa11.27□□□□□ -0.61
HOMER3-209ENST00000596482 LINC00308Q8TCZ7 52 aa11.27□□□□□ -0.61
HOMER3-209ENST00000596482 TSPAN13O95857 204 aa11.26□□□□□ -0.61
HOMER3-209ENST00000596482 S100A6P06703 90 aa11.26□□□□□ -0.61
HOMER3-209ENST00000596482 HIST3H2BBQ8N257 126 aa11.26□□□□□ -0.61
HOMER3-209ENST00000596482 CBY1Q9Y3M2 126 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 301.4 ms