RNA–Protein interactions for RNA: ENST00000594067.5

LIG1-206, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 2,697 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-206ENST00000594067 WFDC9Q8NEX5 89 aa11.21□□□□□ -0.61
LIG1-206ENST00000594067 J3QKU1 62 aa11.21□□□□□ -0.62
LIG1-206ENST00000594067 C6orf99Q4VX62 202 aa11.21□□□□□ -0.62
LIG1-206ENST00000594067 APOC4P55056 127 aa11.2□□□□□ -0.62
LIG1-206ENST00000594067 UNQ6190/PRO20217Q6UXQ8 127 aa11.2□□□□□ -0.62
LIG1-206ENST00000594067 DPH3Q96FX2 82 aa11.2□□□□□ -0.62
LIG1-206ENST00000594067 HELZ2Q9BYK8 2649 aaKnown RBP11.19□□□□□ -0.62
LIG1-206ENST00000594067 SPAG11BQ08648 103 aa11.19□□□□□ -0.62
LIG1-206ENST00000594067 ATP5EP2Q5VTU8 51 aa11.19□□□□□ -0.62
LIG1-206ENST00000594067 FAM19A1Q7Z5A9 133 aa11.19□□□□□ -0.62
LIG1-206ENST00000594067 Q8NAQ8 132 aa11.19□□□□□ -0.62
LIG1-206ENST00000594067 ENHOQ6UWT2 76 aa11.17□□□□□ -0.62
LIG1-206ENST00000594067 KLK12Q9UKR0 248 aa11.17□□□□□ -0.62
LIG1-206ENST00000594067 TRAV23DV6A0A075B6W5 121 aa11.16□□□□□ -0.62
LIG1-206ENST00000594067 GHRHP01286 108 aa11.16□□□□□ -0.62
LIG1-206ENST00000594067 CYSRT1A8MQ03 144 aa11.15□□□□□ -0.62
LIG1-206ENST00000594067 INAFM1C9JVW0 142 aa11.15□□□□□ -0.62
LIG1-206ENST00000594067 LELP1Q5T871 98 aa11.15□□□□□ -0.62
LIG1-206ENST00000594067 LINC00575Q6W349 94 aa11.15□□□□□ -0.62
LIG1-206ENST00000594067 SPART-AS1P0CW21 52 aa11.14□□□□□ -0.63
LIG1-206ENST00000594067 MIFP14174 115 aa11.14□□□□□ -0.63
LIG1-206ENST00000594067 DSCR8Q96T75 97 aa11.14□□□□□ -0.63
LIG1-206ENST00000594067 UBL5Q9BZL1 73 aa11.14□□□□□ -0.63
LIG1-206ENST00000594067 TRBV10-3A0A0K0K1G6 114 aa11.13□□□□□ -0.63
LIG1-206ENST00000594067 OXTP01178 125 aa11.13□□□□□ -0.63
LIG1-206ENST00000594067 TENM1Q9UKZ4 2725 aa11.13□□□□□ -0.63
LIG1-206ENST00000594067 Q6ZQT0 140 aa11.12□□□□□ -0.63
LIG1-206ENST00000594067 NOTCH2Q04721 2471 aa11.11□□□□□ -0.63
LIG1-206ENST00000594067 RBM3P98179 157 aaKnown RBP11.11□□□□□ -0.63
LIG1-206ENST00000594067 A0A0J9YWU9 116 aa11.11□□□□□ -0.63
LIG1-206ENST00000594067 IGHV4-30-4P0DP06 118 aa11.11□□□□□ -0.63
LIG1-206ENST00000594067 PRR34Q9NV39 138 aa11.11□□□□□ -0.63
LIG1-206ENST00000594067 TRRAPQ9Y4A5 3859 aa11.09□□□□□ -0.63
LIG1-206ENST00000594067 M0R2N4 97 aa11.09□□□□□ -0.63
LIG1-206ENST00000594067 C5orf47Q569G3 176 aa11.09□□□□□ -0.63
LIG1-206ENST00000594067 ZNF561-AS1K7EIQ3 104 aa11.08□□□□□ -0.64
LIG1-206ENST00000594067 XAGE1AQ9HD64 81 aa11.08□□□□□ -0.64
LIG1-206ENST00000594067 LOC110117498A0A087WWA1 95 aa11.08□□□□□ -0.64
LIG1-206ENST00000594067 IGLV6-57P01721 117 aa11.07□□□□□ -0.64
LIG1-206ENST00000594067 C6orf48Q9UBA6 75 aa11.07□□□□□ -0.64
LIG1-206ENST00000594067 HECTD1Q9ULT8 2610 aa11.07□□□□□ -0.64
LIG1-206ENST00000594067 OTOGQ6ZRI0 2925 aa11.07□□□□□ -0.64
LIG1-206ENST00000594067 LAMTOR3Q9UHA4 124 aa11.07□□□□□ -0.64
LIG1-206ENST00000594067 MUC7Q8TAX7 377 aa11.06□□□□□ -0.64
LIG1-206ENST00000594067 C20orf197Q8N268 126 aa11.05□□□□□ -0.64
LIG1-206ENST00000594067 NDUFC2-KCTD14E9PQ53 114 aa11.05□□□□□ -0.64
LIG1-206ENST00000594067 LINC01547P58512 204 aaPredicted RBP11.04□□□□□ -0.64
LIG1-206ENST00000594067 Q6ZQY7 126 aa11.04□□□□□ -0.64
LIG1-206ENST00000594067 HIGD2BQ4VC39 106 aa11.03□□□□□ -0.64
LIG1-206ENST00000594067 ATRQ13535 2644 aa11.03□□□□□ -0.64
LIG1-206ENST00000594067 GVQW2A0A096LPI5 108 aaPredicted RBP11.03□□□□□ -0.64
LIG1-206ENST00000594067 Q6ZVQ6 151 aa11.02□□□□□ -0.64
LIG1-206ENST00000594067 WFDC10BQ8IUB3 73 aa11.02□□□□□ -0.64
LIG1-206ENST00000594067 HIVEP1P15822 2718 aa11.02□□□□□ -0.64
LIG1-206ENST00000594067 NSD1Q96L73 2696 aaPredicted RBP11.02□□□□□ -0.65
LIG1-206ENST00000594067 HAMPP81172 84 aa11.01□□□□□ -0.65
LIG1-206ENST00000594067 BCE1O60756 84 aa11.01□□□□□ -0.65
LIG1-206ENST00000594067 RETNQ9HD89 108 aa11.01□□□□□ -0.65
LIG1-206ENST00000594067 Q5XG85 94 aa11□□□□□ -0.65
LIG1-206ENST00000594067 DIRC1Q969H9 104 aa11□□□□□ -0.65
LIG1-206ENST00000594067 TRAV7A0A075B6U4 112 aa10.99□□□□□ -0.65
LIG1-206ENST00000594067 C4orf26Q17RF5 130 aa10.99□□□□□ -0.65
LIG1-206ENST00000594067 CAMK2N2Q96S95 79 aa10.99□□□□□ -0.65
LIG1-206ENST00000594067 TRAV10A0A0B4J240 114 aa10.98□□□□□ -0.65
LIG1-206ENST00000594067 KPRPQ5T749 579 aaPredicted RBP10.98□□□□□ -0.65
LIG1-206ENST00000594067 PDE6GP18545 87 aa10.98□□□□□ -0.65
LIG1-206ENST00000594067 TEP1Q99973 2627 aaKnown RBP10.98□□□□□ -0.65
LIG1-206ENST00000594067 H7BZZ5 65 aa10.97□□□□□ -0.65
LIG1-206ENST00000594067 ZNF73O43830 326 aaPredicted RBP10.97□□□□□ -0.65
LIG1-206ENST00000594067 KMT2BQ9UMN6 2715 aaPredicted RBP10.96□□□□□ -0.65
LIG1-206ENST00000594067 COX7BP24311 80 aa10.95□□□□□ -0.66
LIG1-206ENST00000594067 CXCL6P80162 114 aa10.95□□□□□ -0.66
LIG1-206ENST00000594067 Q6ZRU5 148 aa10.95□□□□□ -0.66
LIG1-206ENST00000594067 FAM236DA0A1B0GTK5 79 aa10.95□□□□□ -0.66
LIG1-206ENST00000594067 H3BQ85 93 aa10.95□□□□□ -0.66
LIG1-206ENST00000594067 FAM236CP0DP71 79 aa10.95□□□□□ -0.66
LIG1-206ENST00000594067 VPREB1P12018 145 aa10.94□□□□□ -0.66
LIG1-206ENST00000594067 KRTAP26-1Q6PEX3 210 aa10.94□□□□□ -0.66
LIG1-206ENST00000594067 Q6ZTC4 211 aa10.94□□□□□ -0.66
LIG1-206ENST00000594067 TRBV7-4A0A0J9YYF1 115 aa10.94□□□□□ -0.66
LIG1-206ENST00000594067 OXLD1Q5BKU9 147 aa10.94□□□□□ -0.66
LIG1-206ENST00000594067 KLKP1Q107X0 134 aa10.93□□□□□ -0.66
LIG1-206ENST00000594067 WIPF1O43516 503 aa10.93□□□□□ -0.66
LIG1-206ENST00000594067 ELOF1P60002 83 aaKnown RBP10.92□□□□□ -0.66
LIG1-206ENST00000594067 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.92□□□□□ -0.66
LIG1-206ENST00000594067 C15orf56Q8N910 161 aa10.92□□□□□ -0.66
LIG1-206ENST00000594067 HRCT1Q6UXD1 115 aa10.92□□□□□ -0.66
LIG1-206ENST00000594067 EPM2AB3EWF7 344 aa10.91□□□□□ -0.66
LIG1-206ENST00000594067 EGFEM1PQ0D2K5 195 aa10.91□□□□□ -0.66
LIG1-206ENST00000594067 ESRGQ1W209 222 aa10.91□□□□□ -0.66
LIG1-206ENST00000594067 SNURFQ9Y675 71 aa10.9□□□□□ -0.66
LIG1-206ENST00000594067 KRTAP10-11P60412 298 aa10.9□□□□□ -0.67
LIG1-206ENST00000594067 M0R378 163 aa10.89□□□□□ -0.67
LIG1-206ENST00000594067 SCXQ7RTU7 201 aa10.89□□□□□ -0.67
LIG1-206ENST00000594067 H3BNG1 76 aa10.89□□□□□ -0.67
LIG1-206ENST00000594067 RMI2Q96E14 147 aa10.89□□□□□ -0.67
LIG1-206ENST00000594067 SERP1Q9Y6X1 66 aa10.88□□□□□ -0.67
LIG1-206ENST00000594067 PKD1L1Q8TDX9 2849 aa10.88□□□□□ -0.67
LIG1-206ENST00000594067 TRBV7-6A0A0J9YX20 115 aa10.87□□□□□ -0.67
LIG1-206ENST00000594067 C1orf43Q9BWL3 253 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 88 ms