RNA–Protein interactions for RNA: ENST00000592960.1

PKN1-215, Transcript of protein kinase N1, humanhuman

TSL 3

Gene PKN1, Length 677 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKN1-215ENST00000592960 SYCNQ0VAF6 134 aa9.7□□□□□ -0.86
PKN1-215ENST00000592960 SRSF9Q13242 221 aaKnown RBP eCLIP9.7□□□□□ -0.86
PKN1-215ENST00000592960 C10orf25Q5T742 122 aa9.7□□□□□ -0.86
PKN1-215ENST00000592960 SPANXB1Q9NS25 103 aaPredicted RBP9.7□□□□□ -0.86
PKN1-215ENST00000592960 ERG28Q9UKR5 140 aa9.7□□□□□ -0.86
PKN1-215ENST00000592960 TRBV30A0A0K0K1B3 111 aa9.69□□□□□ -0.86
PKN1-215ENST00000592960 A0A0U1RRA0 63 aa9.69□□□□□ -0.86
PKN1-215ENST00000592960 LINC00158P58513 81 aa9.69□□□□□ -0.86
PKN1-215ENST00000592960 HSD52Q0P140 79 aa9.69□□□□□ -0.86
PKN1-215ENST00000592960 Q6ZRU5 148 aa9.69□□□□□ -0.86
PKN1-215ENST00000592960 HIST1H4GQ99525 98 aa9.69□□□□□ -0.86
PKN1-215ENST00000592960 PFN2P35080 140 aa9.68□□□□□ -0.86
PKN1-215ENST00000592960 TAL2Q16559 108 aa9.68□□□□□ -0.86
PKN1-215ENST00000592960 CARD19Q96LW7 228 aa9.68□□□□□ -0.86
PKN1-215ENST00000592960 LITAFQ99732 161 aa9.68□□□□□ -0.86
PKN1-215ENST00000592960 C6orf48Q9UBA6 75 aa9.68□□□□□ -0.86
PKN1-215ENST00000592960 COX17Q14061 63 aa9.67□□□□□ -0.86
PKN1-215ENST00000592960 C9orf116Q5BN46 136 aaPredicted RBP9.67□□□□□ -0.86
PKN1-215ENST00000592960 SPANXDQ9BXN6 97 aa9.67□□□□□ -0.86
PKN1-215ENST00000592960 SPANXCQ9NY87 97 aa9.67□□□□□ -0.86
PKN1-215ENST00000592960 RNF213Q63HN8 5207 aa9.67□□□□□ -0.86
PKN1-215ENST00000592960 ADAMTSL4-AS1Q5T5F5 129 aa9.66□□□□□ -0.86
PKN1-215ENST00000592960 Q6ZVH6 145 aa9.66□□□□□ -0.86
PKN1-215ENST00000592960 CIRBP-AS1Q8TBR5 109 aa9.66□□□□□ -0.86
PKN1-215ENST00000592960 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.65□□□□□ -0.86
PKN1-215ENST00000592960 LINC01620Q4KN68 170 aa9.65□□□□□ -0.86
PKN1-215ENST00000592960 MIR7-3HGQ8N6C7 128 aa9.65□□□□□ -0.86
PKN1-215ENST00000592960 DAND5Q8N907 189 aa9.65□□□□□ -0.86
PKN1-215ENST00000592960 TNXBP22105 4242 aa9.65□□□□□ -0.86
PKN1-215ENST00000592960 LRP2P98164 4655 aa9.64□□□□□ -0.87
PKN1-215ENST00000592960 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.64□□□□□ -0.87
PKN1-215ENST00000592960 M0R143 59 aa9.64□□□□□ -0.87
PKN1-215ENST00000592960 SLPIP03973 132 aa9.64□□□□□ -0.87
PKN1-215ENST00000592960 HINT1P49773 126 aaPredicted RBP9.64□□□□□ -0.87
PKN1-215ENST00000592960 RNF151Q2KHN1 245 aa9.64□□□□□ -0.87
PKN1-215ENST00000592960 CEND1Q8N111 149 aa9.64□□□□□ -0.87
PKN1-215ENST00000592960 COPS9Q8WXC6 57 aa9.64□□□□□ -0.87
PKN1-215ENST00000592960 IFITM1P13164 125 aa9.63□□□□□ -0.87
PKN1-215ENST00000592960 NPC2P61916 151 aa9.63□□□□□ -0.87
PKN1-215ENST00000592960 CNBPP62633 177 aaKnown RBP9.63□□□□□ -0.87
PKN1-215ENST00000592960 MUSTN1Q8IVN3 82 aa9.62□□□□□ -0.87
PKN1-215ENST00000592960 PTTG1IPP53801 180 aa9.61□□□□□ -0.87
PKN1-215ENST00000592960 BVES-AS1Q5T3Y7 98 aa9.61□□□□□ -0.87
PKN1-215ENST00000592960 LINC00308Q8TCZ7 52 aa9.61□□□□□ -0.87
PKN1-215ENST00000592960 NDUFC2-KCTD14E9PQ53 114 aa9.6□□□□□ -0.87
PKN1-215ENST00000592960 RPL24P83731 157 aaKnown RBP9.6□□□□□ -0.87
PKN1-215ENST00000592960 BATFQ16520 125 aa9.6□□□□□ -0.87
PKN1-215ENST00000592960 TMEM238LA0A1B0GVL6 79 aa9.59□□□□□ -0.87
PKN1-215ENST00000592960 A6NJY4 79 aa9.59□□□□□ -0.87
PKN1-215ENST00000592960 FXYD2P54710 66 aa9.59□□□□□ -0.87
PKN1-215ENST00000592960 RPL18AQ02543 176 aaKnown RBP9.59□□□□□ -0.87
PKN1-215ENST00000592960 LOC107984640A0A0U1RRK4 108 aa9.58□□□□□ -0.88
PKN1-215ENST00000592960 TLX1NBP0CAT3 122 aa9.58□□□□□ -0.88
PKN1-215ENST00000592960 SOSTDC1Q6X4U4 206 aa9.58□□□□□ -0.88
PKN1-215ENST00000592960 SND1-IT1Q9HBX3 110 aa9.58□□□□□ -0.88
PKN1-215ENST00000592960 GAGE2EQ4V326 116 aa9.57□□□□□ -0.88
PKN1-215ENST00000592960 PPDPFQ9H3Y8 114 aa9.57□□□□□ -0.88
PKN1-215ENST00000592960 GAGE2DQ9UEU5 116 aa9.57□□□□□ -0.88
PKN1-215ENST00000592960 A4D1N5 150 aa9.56□□□□□ -0.88
PKN1-215ENST00000592960 MT1HL1P0DM35 61 aa9.56□□□□□ -0.88
PKN1-215ENST00000592960 Q6ZRP5 223 aa9.56□□□□□ -0.88
PKN1-215ENST00000592960 SNHG12Q9BXW3 62 aa9.56□□□□□ -0.88
PKN1-215ENST00000592960 PKIGQ9Y2B9 76 aa9.56□□□□□ -0.88
PKN1-215ENST00000592960 A6NDN8 102 aa9.55□□□□□ -0.88
PKN1-215ENST00000592960 EIF4EBP3O60516 100 aaPredicted RBP9.55□□□□□ -0.88
PKN1-215ENST00000592960 RPL37AP61513 92 aaKnown RBP9.55□□□□□ -0.88
PKN1-215ENST00000592960 C9orf163Q8N9P6 203 aa9.55□□□□□ -0.88
PKN1-215ENST00000592960 XAGE1AQ9HD64 81 aa9.55□□□□□ -0.88
PKN1-215ENST00000592960 LOC107984156A0A0G2JMH3 177 aa9.54□□□□□ -0.88
PKN1-215ENST00000592960 GAGE2BQ13066 116 aa9.54□□□□□ -0.88
PKN1-215ENST00000592960 ARL17AQ8IVW1 177 aa9.54□□□□□ -0.88
PKN1-215ENST00000592960 NHP2Q9NX24 153 aaKnown RBP9.54□□□□□ -0.88
PKN1-215ENST00000592960 RAB37Q96AX2 223 aa9.51□□□□□ -0.89
PKN1-215ENST00000592960 NDUFC2O95298 119 aa9.5□□□□□ -0.89
PKN1-215ENST00000592960 CFC1BP0CG36 223 aa9.5□□□□□ -0.89
PKN1-215ENST00000592960 CFC1P0CG37 223 aa9.5□□□□□ -0.89
PKN1-215ENST00000592960 C9orf129Q5T035 196 aaKnown RBP9.5□□□□□ -0.89
PKN1-215ENST00000592960 A0A096LNI7 61 aa9.49□□□□□ -0.89
PKN1-215ENST00000592960 A0A0B4J2C4 111 aa9.49□□□□□ -0.89
PKN1-215ENST00000592960 IGKV2-24A0A0C4DH68 120 aa9.49□□□□□ -0.89
PKN1-215ENST00000592960 A0A1B0GWB2 263 aa9.49□□□□□ -0.89
PKN1-215ENST00000592960 K7ERJ3 54 aa9.49□□□□□ -0.89
PKN1-215ENST00000592960 COL5A1-AS1Q5SY13 56 aa9.48□□□□□ -0.89
PKN1-215ENST00000592960 SDIM1Q6ZPB5 146 aa9.47□□□□□ -0.89
PKN1-215ENST00000592960 TRAV13-2A0A0B4J235 113 aa9.46□□□□□ -0.9
PKN1-215ENST00000592960 NCR3O14931 201 aa9.46□□□□□ -0.9
PKN1-215ENST00000592960 PRO1854Q9UHT4 67 aa9.46□□□□□ -0.9
PKN1-215ENST00000592960 IGKV2-28A0A075B6P5 120 aa9.45□□□□□ -0.9
PKN1-215ENST00000592960 IGKV2D-28P01615 120 aa9.45□□□□□ -0.9
PKN1-215ENST00000592960 VPREB1P12018 145 aa9.45□□□□□ -0.9
PKN1-215ENST00000592960 PRR3P79522 188 aaKnown RBP9.45□□□□□ -0.9
PKN1-215ENST00000592960 Q8NDZ9 215 aa9.45□□□□□ -0.9
PKN1-215ENST00000592960 LINC00474Q9P2X8 69 aa9.45□□□□□ -0.9
PKN1-215ENST00000592960 CHTF8P0CG12 524 aa9.44□□□□□ -0.9
PKN1-215ENST00000592960 RPL13AP40429 203 aaKnown RBP9.44□□□□□ -0.9
PKN1-215ENST00000592960 LBHQ53QV2 105 aaPredicted RBP9.44□□□□□ -0.9
PKN1-215ENST00000592960 LINC00337Q8N6G1 96 aa9.44□□□□□ -0.9
PKN1-215ENST00000592960 NKAPP1Q8N9T2 125 aa9.44□□□□□ -0.9
PKN1-215ENST00000592960 OR13C6PQ8NH95 151 aa9.44□□□□□ -0.9
PKN1-215ENST00000592960 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 120.4 ms