RNA–Protein interactions for RNA: ENST00000592604.5

SMARCA4-219, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 1 (best)

Gene SMARCA4, Length 2,940 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-219ENST00000592604 C4orf48Q5BLP8 95 aa10.13□□□□□ -0.79
SMARCA4-219ENST00000592604 LYRM9A8MSI8 78 aa10.12□□□□□ -0.79
SMARCA4-219ENST00000592604 MUC7Q8TAX7 377 aa10.12□□□□□ -0.79
SMARCA4-219ENST00000592604 ANGP03950 147 aaKnown RBP10.11□□□□□ -0.79
SMARCA4-219ENST00000592604 IGLV10-54A0A075B6I4 117 aa10.11□□□□□ -0.79
SMARCA4-219ENST00000592604 HILS1P60008 231 aa10.1□□□□□ -0.79
SMARCA4-219ENST00000592604 Q8N3U1 123 aa10.1□□□□□ -0.79
SMARCA4-219ENST00000592604 UBL5Q9BZL1 73 aa10.1□□□□□ -0.79
SMARCA4-219ENST00000592604 ANK3Q12955 4377 aaKnown RBP10.1□□□□□ -0.79
SMARCA4-219ENST00000592604 Q6ZQT0 140 aa10.09□□□□□ -0.79
SMARCA4-219ENST00000592604 LOC110117498A0A087WWA1 95 aa10.08□□□□□ -0.8
SMARCA4-219ENST00000592604 RBM3P98179 157 aaKnown RBP10.08□□□□□ -0.8
SMARCA4-219ENST00000592604 ENHOQ6UWT2 76 aa10.08□□□□□ -0.8
SMARCA4-219ENST00000592604 WFDC9Q8NEX5 89 aa10.08□□□□□ -0.8
SMARCA4-219ENST00000592604 A0A0J9YWU9 116 aa10.07□□□□□ -0.8
SMARCA4-219ENST00000592604 GHRHP01286 108 aa10.07□□□□□ -0.8
SMARCA4-219ENST00000592604 IGHV4-30-4P0DP06 118 aa10.07□□□□□ -0.8
SMARCA4-219ENST00000592604 C6orf223Q8N319 242 aa10.07□□□□□ -0.8
SMARCA4-219ENST00000592604 PMAIP1Q13794 54 aa10.07□□□□□ -0.8
SMARCA4-219ENST00000592604 C10orf25Q5T742 122 aa10.07□□□□□ -0.8
SMARCA4-219ENST00000592604 IGLV6-57P01721 117 aa10.06□□□□□ -0.8
SMARCA4-219ENST00000592604 UNQ6190/PRO20217Q6UXQ8 127 aa10.06□□□□□ -0.8
SMARCA4-219ENST00000592604 KRTAP10-3P60369 221 aa10.06□□□□□ -0.8
SMARCA4-219ENST00000592604 TRAV23DV6A0A075B6W5 121 aa10.05□□□□□ -0.8
SMARCA4-219ENST00000592604 SPAG11BQ08648 103 aa10.05□□□□□ -0.8
SMARCA4-219ENST00000592604 FP248Q71RG6 208 aaPredicted RBP10.05□□□□□ -0.8
SMARCA4-219ENST00000592604 MTORP42345 2549 aa10.04□□□□□ -0.8
SMARCA4-219ENST00000592604 ACANP16112 2415 aa10.04□□□□□ -0.8
SMARCA4-219ENST00000592604 GCN1Q92616 2671 aaKnown RBP10.04□□□□□ -0.8
SMARCA4-219ENST00000592604 H3BQ85 93 aa10.03□□□□□ -0.8
SMARCA4-219ENST00000592604 CYSRT1A8MQ03 144 aa10.03□□□□□ -0.8
SMARCA4-219ENST00000592604 SERP1Q9Y6X1 66 aa10.03□□□□□ -0.8
SMARCA4-219ENST00000592604 BCE1O60756 84 aa10.03□□□□□ -0.8
SMARCA4-219ENST00000592604 LAMTOR3Q9UHA4 124 aa10.03□□□□□ -0.8
SMARCA4-219ENST00000592604 NDUFC2-KCTD14E9PQ53 114 aa10.02□□□□□ -0.81
SMARCA4-219ENST00000592604 DEFB4AO15263 64 aa10.02□□□□□ -0.81
SMARCA4-219ENST00000592604 DAD1P61803 113 aa10.02□□□□□ -0.81
SMARCA4-219ENST00000592604 NBEAL2Q6ZNJ1 2754 aa10.02□□□□□ -0.81
SMARCA4-219ENST00000592604 GVQW2A0A096LPI5 108 aaPredicted RBP10.02□□□□□ -0.81
SMARCA4-219ENST00000592604 PRR34Q9NV39 138 aa10.02□□□□□ -0.81
SMARCA4-219ENST00000592604 DEFB135Q30KP9 77 aa10.01□□□□□ -0.81
SMARCA4-219ENST00000592604 LELP1Q5T871 98 aa10.01□□□□□ -0.81
SMARCA4-219ENST00000592604 PDE6GP18545 87 aa10.01□□□□□ -0.81
SMARCA4-219ENST00000592604 C9orf66Q5T8R8 295 aa10.01□□□□□ -0.81
SMARCA4-219ENST00000592604 EPM2AB3EWF7 344 aa10□□□□□ -0.81
SMARCA4-219ENST00000592604 M0R2N4 97 aa10□□□□□ -0.81
SMARCA4-219ENST00000592604 Q6ZQY7 126 aa10□□□□□ -0.81
SMARCA4-219ENST00000592604 SMIM26A0A096LP01 95 aa10□□□□□ -0.81
SMARCA4-219ENST00000592604 LINC01547P58512 204 aaPredicted RBP10□□□□□ -0.81
SMARCA4-219ENST00000592604 PDZD2O15018 2839 aa9.99□□□□□ -0.81
SMARCA4-219ENST00000592604 Q6ZVQ6 151 aa9.99□□□□□ -0.81
SMARCA4-219ENST00000592604 CD164Q04900 197 aa9.98□□□□□ -0.81
SMARCA4-219ENST00000592604 LINC00474Q9P2X8 69 aa9.98□□□□□ -0.81
SMARCA4-219ENST00000592604 CELA1Q9UNI1 258 aa9.98□□□□□ -0.81
SMARCA4-219ENST00000592604 APOC4P55056 127 aa9.97□□□□□ -0.81
SMARCA4-219ENST00000592604 Q8NAQ8 132 aa9.97□□□□□ -0.81
SMARCA4-219ENST00000592604 KLK12Q9UKR0 248 aa9.97□□□□□ -0.81
SMARCA4-219ENST00000592604 SPATA3Q8NHX4 192 aa9.96□□□□□ -0.81
SMARCA4-219ENST00000592604 DIRC1Q969H9 104 aa9.96□□□□□ -0.81
SMARCA4-219ENST00000592604 C6orf48Q9UBA6 75 aa9.96□□□□□ -0.81
SMARCA4-219ENST00000592604 TRAV7A0A075B6U4 112 aa9.96□□□□□ -0.81
SMARCA4-219ENST00000592604 MIFP14174 115 aa9.96□□□□□ -0.82
SMARCA4-219ENST00000592604 CXCL6P80162 114 aa9.96□□□□□ -0.82
SMARCA4-219ENST00000592604 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.96□□□□□ -0.82
SMARCA4-219ENST00000592604 C20orf197Q8N268 126 aa9.96□□□□□ -0.82
SMARCA4-219ENST00000592604 HAMPP81172 84 aa9.95□□□□□ -0.82
SMARCA4-219ENST00000592604 TRBV7-4A0A0J9YYF1 115 aa9.94□□□□□ -0.82
SMARCA4-219ENST00000592604 SPART-AS1P0CW21 52 aa9.94□□□□□ -0.82
SMARCA4-219ENST00000592604 TRBV7-6A0A0J9YX20 115 aa9.93□□□□□ -0.82
SMARCA4-219ENST00000592604 ZNF73O43830 326 aaPredicted RBP9.93□□□□□ -0.82
SMARCA4-219ENST00000592604 COX7BP24311 80 aa9.93□□□□□ -0.82
SMARCA4-219ENST00000592604 XAGE1AQ9HD64 81 aa9.93□□□□□ -0.82
SMARCA4-219ENST00000592604 ELOF1P60002 83 aaKnown RBP9.92□□□□□ -0.82
SMARCA4-219ENST00000592604 HTN3P15516 51 aa9.91□□□□□ -0.82
SMARCA4-219ENST00000592604 TRAV10A0A0B4J240 114 aa9.9□□□□□ -0.82
SMARCA4-219ENST00000592604 HIVEP2P31629 2446 aa9.9□□□□□ -0.82
SMARCA4-219ENST00000592604 H7BZZ5 65 aa9.89□□□□□ -0.83
SMARCA4-219ENST00000592604 KLKP1Q107X0 134 aa9.89□□□□□ -0.83
SMARCA4-219ENST00000592604 VPREB1P12018 145 aa9.89□□□□□ -0.83
SMARCA4-219ENST00000592604 VWFP04275 2813 aa9.88□□□□□ -0.83
SMARCA4-219ENST00000592604 MPLKIPQ8TAP9 179 aa9.87□□□□□ -0.83
SMARCA4-219ENST00000592604 SMR3AQ99954 134 aa9.87□□□□□ -0.83
SMARCA4-219ENST00000592604 M0R378 163 aa9.86□□□□□ -0.83
SMARCA4-219ENST00000592604 EGFEM1PQ0D2K5 195 aa9.86□□□□□ -0.83
SMARCA4-219ENST00000592604 C11orf45Q8TAV5 145 aa9.86□□□□□ -0.83
SMARCA4-219ENST00000592604 ITPR2Q14571 2701 aa9.86□□□□□ -0.83
SMARCA4-219ENST00000592604 KRTAP26-1Q6PEX3 210 aa9.85□□□□□ -0.83
SMARCA4-219ENST00000592604 MRPL55Q7Z7F7 128 aaKnown RBP9.85□□□□□ -0.83
SMARCA4-219ENST00000592604 CAMK2N2Q96S95 79 aa9.85□□□□□ -0.83
SMARCA4-219ENST00000592604 LINC00528Q8N1L1 170 aa9.85□□□□□ -0.83
SMARCA4-219ENST00000592604 TENM4Q6N022 2769 aa9.85□□□□□ -0.83
SMARCA4-219ENST00000592604 HIGD2BQ4VC39 106 aa9.83□□□□□ -0.84
SMARCA4-219ENST00000592604 Q6ZRU5 148 aa9.82□□□□□ -0.84
SMARCA4-219ENST00000592604 SCXQ7RTU7 201 aa9.81□□□□□ -0.84
SMARCA4-219ENST00000592604 WFDC10BQ8IUB3 73 aa9.81□□□□□ -0.84
SMARCA4-219ENST00000592604 H3BNG1 76 aa9.8□□□□□ -0.84
SMARCA4-219ENST00000592604 RMI2Q96E14 147 aa9.8□□□□□ -0.84
SMARCA4-219ENST00000592604 PRR15Q8IV56 129 aa9.8□□□□□ -0.84
SMARCA4-219ENST00000592604 C15orf56Q8N910 161 aa9.8□□□□□ -0.84
SMARCA4-219ENST00000592604 TM2D3Q9BRN9 247 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms