RNA–Protein interactions for RNA: ENST00000592060.5

MBD1-227, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best)

Gene MBD1, Length 1,952 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-227ENST00000592060 DNAL4O96015 105 aa10.52□□□□□ -0.72
MBD1-227ENST00000592060 TM2D3Q9BRN9 247 aa10.52□□□□□ -0.73
MBD1-227ENST00000592060 PRB2P02812 416 aaPredicted RBP10.51□□□□□ -0.73
MBD1-227ENST00000592060 C15orf56Q8N910 161 aa10.5□□□□□ -0.73
MBD1-227ENST00000592060 K7EIL1 84 aa10.5□□□□□ -0.73
MBD1-227ENST00000592060 LINC00167Q96N53 147 aa10.5□□□□□ -0.73
MBD1-227ENST00000592060 HIGD2BQ4VC39 106 aa10.49□□□□□ -0.73
MBD1-227ENST00000592060 C15orf53Q8NAA6 179 aa10.48□□□□□ -0.73
MBD1-227ENST00000592060 TRAV10A0A0B4J240 114 aa10.48□□□□□ -0.73
MBD1-227ENST00000592060 A0A1B0GX51 115 aa10.48□□□□□ -0.73
MBD1-227ENST00000592060 ZNF561-AS1K7EIQ3 104 aa10.47□□□□□ -0.73
MBD1-227ENST00000592060 DNAH10OSP0CZ25 163 aa10.46□□□□□ -0.73
MBD1-227ENST00000592060 OBSCN-AS1Q96MR7 158 aa10.46□□□□□ -0.73
MBD1-227ENST00000592060 C1orf43Q9BWL3 253 aa10.46□□□□□ -0.73
MBD1-227ENST00000592060 IGLV6-57P01721 117 aa10.46□□□□□ -0.74
MBD1-227ENST00000592060 SLPIP03973 132 aa10.46□□□□□ -0.74
MBD1-227ENST00000592060 ACYP1P07311 99 aa10.46□□□□□ -0.74
MBD1-227ENST00000592060 INAFM2P0DMQ5 153 aa10.46□□□□□ -0.74
MBD1-227ENST00000592060 S100A7L2Q5SY68 101 aa10.46□□□□□ -0.74
MBD1-227ENST00000592060 C9orf129Q5T035 196 aaKnown RBP10.46□□□□□ -0.74
MBD1-227ENST00000592060 C2orf48Q96LS8 159 aa10.46□□□□□ -0.74
MBD1-227ENST00000592060 CAMK2N2Q96S95 79 aa10.46□□□□□ -0.74
MBD1-227ENST00000592060 SNCGO76070 127 aa10.45□□□□□ -0.74
MBD1-227ENST00000592060 C6orf99Q4VX62 202 aa10.45□□□□□ -0.74
MBD1-227ENST00000592060 Q6ZRU5 148 aa10.45□□□□□ -0.74
MBD1-227ENST00000592060 Q8N814 137 aa10.45□□□□□ -0.74
MBD1-227ENST00000592060 RPL18AQ02543 176 aaKnown RBP10.44□□□□□ -0.74
MBD1-227ENST00000592060 ORMDL1Q9P0S3 153 aa10.44□□□□□ -0.74
MBD1-227ENST00000592060 TTC32Q5I0X7 151 aa10.43□□□□□ -0.74
MBD1-227ENST00000592060 XAGE1AQ9HD64 81 aa10.43□□□□□ -0.74
MBD1-227ENST00000592060 HUWE1Q7Z6Z7 4374 aaKnown RBP10.43□□□□□ -0.74
MBD1-227ENST00000592060 IGKV2D-24A0A075B6R9 120 aa10.43□□□□□ -0.74
MBD1-227ENST00000592060 MRAPQ8TCY5 172 aa10.42□□□□□ -0.74
MBD1-227ENST00000592060 LINC00588Q9Y4M8 146 aa10.42□□□□□ -0.74
MBD1-227ENST00000592060 Q6Q795 121 aa10.41□□□□□ -0.74
MBD1-227ENST00000592060 F8WDY8 70 aa10.41□□□□□ -0.74
MBD1-227ENST00000592060 SDIM1Q6ZPB5 146 aa10.41□□□□□ -0.74
MBD1-227ENST00000592060 LINC00575Q6W349 94 aa10.4□□□□□ -0.74
MBD1-227ENST00000592060 SMCR5Q8TEV8 140 aa10.4□□□□□ -0.74
MBD1-227ENST00000592060 VPREB1P12018 145 aa10.39□□□□□ -0.75
MBD1-227ENST00000592060 NOTCH1P46531 2555 aa10.39□□□□□ -0.75
MBD1-227ENST00000592060 TRBV10-3A0A0K0K1G6 114 aa10.39□□□□□ -0.75
MBD1-227ENST00000592060 NDUFC2-KCTD14E9PQ53 114 aa10.39□□□□□ -0.75
MBD1-227ENST00000592060 GAGE2BQ13066 116 aa10.39□□□□□ -0.75
MBD1-227ENST00000592060 GAGE2EQ4V326 116 aa10.39□□□□□ -0.75
MBD1-227ENST00000592060 C14orf132Q9NPU4 83 aa10.39□□□□□ -0.75
MBD1-227ENST00000592060 GAGE2DQ9UEU5 116 aa10.39□□□□□ -0.75
MBD1-227ENST00000592060 GAGE2AQ6NT46 116 aa10.37□□□□□ -0.75
MBD1-227ENST00000592060 TRAV23DV6A0A075B6W5 121 aa10.36□□□□□ -0.75
MBD1-227ENST00000592060 TRBV7-7A0A0K0K1E9 115 aa10.35□□□□□ -0.75
MBD1-227ENST00000592060 A0A1B0GV72 72 aa10.35□□□□□ -0.75
MBD1-227ENST00000592060 SYCNQ0VAF6 134 aa10.35□□□□□ -0.75
MBD1-227ENST00000592060 TMEM256-PLSCR3K7ERE1 68 aa10.35□□□□□ -0.75
MBD1-227ENST00000592060 Q6ZRP5 223 aa10.35□□□□□ -0.75
MBD1-227ENST00000592060 DNAH1Q9P2D7 4330 aa10.34□□□□□ -0.75
MBD1-227ENST00000592060 hADV29S1A0JD25 119 aa10.34□□□□□ -0.75
MBD1-227ENST00000592060 LINC00643Q86TS7 51 aa10.34□□□□□ -0.75
MBD1-227ENST00000592060 DIRC1Q969H9 104 aa10.34□□□□□ -0.75
MBD1-227ENST00000592060 UPK3BQ9BT76 320 aa10.34□□□□□ -0.75
MBD1-227ENST00000592060 M0R378 163 aa10.33□□□□□ -0.76
MBD1-227ENST00000592060 JMJD7-PLA2G4BH0Y9G9 81 aa10.32□□□□□ -0.76
MBD1-227ENST00000592060 CASC10Q5T4H9 136 aa10.32□□□□□ -0.76
MBD1-227ENST00000592060 ZNF73O43830 326 aaPredicted RBP10.31□□□□□ -0.76
MBD1-227ENST00000592060 TRBV7-6A0A0J9YX20 115 aa10.3□□□□□ -0.76
MBD1-227ENST00000592060 USP17L23D6RBM5 183 aa10.3□□□□□ -0.76
MBD1-227ENST00000592060 NDUFV3P56181 108 aaKnown RBP10.3□□□□□ -0.76
MBD1-227ENST00000592060 TLX1NBP0CAT3 122 aa10.29□□□□□ -0.76
MBD1-227ENST00000592060 ELOF1P60002 83 aaKnown RBP10.29□□□□□ -0.76
MBD1-227ENST00000592060 CCKP06307 115 aa10.28□□□□□ -0.76
MBD1-227ENST00000592060 COX7BP24311 80 aa10.28□□□□□ -0.76
MBD1-227ENST00000592060 RMI2Q96E14 147 aa10.28□□□□□ -0.76
MBD1-227ENST00000592060 IMUPQ9GZP8 106 aa10.28□□□□□ -0.76
MBD1-227ENST00000592060 NHLRC4P0CG21 123 aaPredicted RBP10.28□□□□□ -0.76
MBD1-227ENST00000592060 ANAPC13Q9BS18 74 aa10.28□□□□□ -0.76
MBD1-227ENST00000592060 LINC00846Q9NV44 126 aa10.27□□□□□ -0.77
MBD1-227ENST00000592060 Q6ZQY7 126 aa10.26□□□□□ -0.77
MBD1-227ENST00000592060 SERTAD4-AS1Q5TG53 156 aa10.25□□□□□ -0.77
MBD1-227ENST00000592060 H3BQ85 93 aa10.24□□□□□ -0.77
MBD1-227ENST00000592060 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.24□□□□□ -0.77
MBD1-227ENST00000592060 PLA2G2DQ9UNK4 145 aa10.24□□□□□ -0.77
MBD1-227ENST00000592060 DNAH9Q9NYC9 4486 aa10.23□□□□□ -0.77
MBD1-227ENST00000592060 LINC00528Q8N1L1 170 aa10.23□□□□□ -0.77
MBD1-227ENST00000592060 Q6JHZ5 121 aa10.22□□□□□ -0.77
MBD1-227ENST00000592060 NKAPP1Q8N9T2 125 aa10.21□□□□□ -0.77
MBD1-227ENST00000592060 C7orf33Q8WU49 177 aa10.21□□□□□ -0.77
MBD1-227ENST00000592060 IGLV5-37A0A075B6J1 123 aa10.21□□□□□ -0.78
MBD1-227ENST00000592060 LOC110117498A0A087WWA1 95 aa10.21□□□□□ -0.78
MBD1-227ENST00000592060 KRTAP1-5Q9BYS1 174 aa10.21□□□□□ -0.78
MBD1-227ENST00000592060 KCNQ1DNQ9H478 68 aa10.21□□□□□ -0.78
MBD1-227ENST00000592060 MGAM2Q2M2H8 2515 aa10.2□□□□□ -0.78
MBD1-227ENST00000592060 RBM3P98179 157 aaKnown RBP10.2□□□□□ -0.78
MBD1-227ENST00000592060 Q6ZQT0 140 aa10.2□□□□□ -0.78
MBD1-227ENST00000592060 B9D2Q9BPU9 175 aa10.2□□□□□ -0.78
MBD1-227ENST00000592060 LAMTOR3Q9UHA4 124 aa10.2□□□□□ -0.78
MBD1-227ENST00000592060 APLNQ9ULZ1 77 aa10.19□□□□□ -0.78
MBD1-227ENST00000592060 DYNC2H1Q8NCM8 4307 aaKnown RBP10.18□□□□□ -0.78
MBD1-227ENST00000592060 FAM236AA0A1B0GUQ0 79 aa10.17□□□□□ -0.78
MBD1-227ENST00000592060 FAM236BA0A1B0GV22 79 aa10.17□□□□□ -0.78
MBD1-227ENST00000592060 KRTAP7-1Q8IUC3 87 aa10.17□□□□□ -0.78
MBD1-227ENST00000592060 FAM168BA1KXE4 195 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms