RNA–Protein interactions for RNA: ENST00000590574.5

SMARCA4-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 5,282 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-215ENST00000590574 NHLRC4P0CG21 123 aaPredicted RBP11.73□□□□□ -0.53
SMARCA4-215ENST00000590574 C14orf177Q52M58 125 aa11.73□□□□□ -0.53
SMARCA4-215ENST00000590574 C6orf48Q9UBA6 75 aa11.73□□□□□ -0.53
SMARCA4-215ENST00000590574 C2orf48Q96LS8 159 aa11.73□□□□□ -0.53
SMARCA4-215ENST00000590574 PPDPFQ9H3Y8 114 aa11.72□□□□□ -0.53
SMARCA4-215ENST00000590574 FAM30AQ9NZY2 134 aa11.72□□□□□ -0.53
SMARCA4-215ENST00000590574 BRK1Q8WUW1 75 aa11.72□□□□□ -0.53
SMARCA4-215ENST00000590574 FAM104AQ969W3 186 aa11.71□□□□□ -0.53
SMARCA4-215ENST00000590574 ACANP16112 2415 aa11.71□□□□□ -0.53
SMARCA4-215ENST00000590574 CRYGAP11844 174 aa11.71□□□□□ -0.54
SMARCA4-215ENST00000590574 JMJD1CQ15652 2540 aa11.7□□□□□ -0.54
SMARCA4-215ENST00000590574 ATP5EP56381 51 aaPredicted RBP11.7□□□□□ -0.54
SMARCA4-215ENST00000590574 C1orf137Q5JT78 98 aa11.69□□□□□ -0.54
SMARCA4-215ENST00000590574 SPATA3Q8NHX4 192 aa11.69□□□□□ -0.54
SMARCA4-215ENST00000590574 C19orf73Q9NVV2 129 aa11.67□□□□□ -0.54
SMARCA4-215ENST00000590574 WFDC13Q8IUB5 93 aa11.67□□□□□ -0.54
SMARCA4-215ENST00000590574 Q6ZQT0 140 aa11.66□□□□□ -0.54
SMARCA4-215ENST00000590574 CXCL6P80162 114 aa11.66□□□□□ -0.54
SMARCA4-215ENST00000590574 HRCT1Q6UXD1 115 aa11.66□□□□□ -0.54
SMARCA4-215ENST00000590574 SERP1Q9Y6X1 66 aa11.65□□□□□ -0.54
SMARCA4-215ENST00000590574 Q8NAQ8 132 aa11.65□□□□□ -0.54
SMARCA4-215ENST00000590574 F8WDY8 70 aa11.64□□□□□ -0.55
SMARCA4-215ENST00000590574 Q8N9L7 120 aa11.63□□□□□ -0.55
SMARCA4-215ENST00000590574 ESRGQ1W209 222 aa11.63□□□□□ -0.55
SMARCA4-215ENST00000590574 BOD1L1Q8NFC6 3051 aa11.63□□□□□ -0.55
SMARCA4-215ENST00000590574 REG3GQ6UW15 175 aa11.63□□□□□ -0.55
SMARCA4-215ENST00000590574 ELOF1P60002 83 aaKnown RBP11.62□□□□□ -0.55
SMARCA4-215ENST00000590574 LOC110117498A0A087WWA1 95 aa11.61□□□□□ -0.55
SMARCA4-215ENST00000590574 PRR4Q16378 134 aa11.6□□□□□ -0.55
SMARCA4-215ENST00000590574 MRPL55Q7Z7F7 128 aaKnown RBP11.6□□□□□ -0.55
SMARCA4-215ENST00000590574 PRYO14603 147 aa11.59□□□□□ -0.55
SMARCA4-215ENST00000590574 SMIM26A0A096LP01 95 aa11.59□□□□□ -0.55
SMARCA4-215ENST00000590574 C9orf129Q5T035 196 aaKnown RBP11.59□□□□□ -0.55
SMARCA4-215ENST00000590574 KIAA0087Q14695 138 aa11.59□□□□□ -0.55
SMARCA4-215ENST00000590574 C7orf33Q8WU49 177 aa11.59□□□□□ -0.55
SMARCA4-215ENST00000590574 KRTAP1-3Q8IUG1 177 aa11.58□□□□□ -0.56
SMARCA4-215ENST00000590574 LINC01556Q5JQF7 62 aa11.58□□□□□ -0.56
SMARCA4-215ENST00000590574 IGLV6-57P01721 117 aa11.57□□□□□ -0.56
SMARCA4-215ENST00000590574 TMEM254Q8TBM7 123 aa11.57□□□□□ -0.56
SMARCA4-215ENST00000590574 LINC01600Q96MT4 127 aa11.57□□□□□ -0.56
SMARCA4-215ENST00000590574 TRBV7-6A0A0J9YX20 115 aa11.56□□□□□ -0.56
SMARCA4-215ENST00000590574 KRTAP10-3P60369 221 aa11.55□□□□□ -0.56
SMARCA4-215ENST00000590574 LINC00612Q8N6U2 182 aa11.55□□□□□ -0.56
SMARCA4-215ENST00000590574 GVQW2A0A096LPI5 108 aaPredicted RBP11.54□□□□□ -0.56
SMARCA4-215ENST00000590574 C22orf24Q9Y442 160 aa11.54□□□□□ -0.56
SMARCA4-215ENST00000590574 H3BNG1 76 aa11.53□□□□□ -0.56
SMARCA4-215ENST00000590574 EPG5Q9HCE0 2579 aa11.53□□□□□ -0.56
SMARCA4-215ENST00000590574 A0A0U1RQV1 116 aa11.52□□□□□ -0.57
SMARCA4-215ENST00000590574 IGKV4-1P06312 121 aa11.52□□□□□ -0.57
SMARCA4-215ENST00000590574 DEFB116Q30KQ4 102 aa11.51□□□□□ -0.57
SMARCA4-215ENST00000590574 M0R2N4 97 aa11.51□□□□□ -0.57
SMARCA4-215ENST00000590574 ADGRG4Q8IZF6 3080 aa11.51□□□□□ -0.57
SMARCA4-215ENST00000590574 VPREB1P12018 145 aa11.5□□□□□ -0.57
SMARCA4-215ENST00000590574 LRCOL1A6NCL2 159 aa11.5□□□□□ -0.57
SMARCA4-215ENST00000590574 BCE1O60756 84 aa11.5□□□□□ -0.57
SMARCA4-215ENST00000590574 RPS28P62857 69 aaKnown RBP11.49□□□□□ -0.57
SMARCA4-215ENST00000590574 SVIPQ8NHG7 77 aa11.49□□□□□ -0.57
SMARCA4-215ENST00000590574 LINC00167Q96N53 147 aa11.49□□□□□ -0.57
SMARCA4-215ENST00000590574 IGLV9-49A0A0B4J1Y8 123 aa11.49□□□□□ -0.57
SMARCA4-215ENST00000590574 PRLHP81277 87 aa11.49□□□□□ -0.57
SMARCA4-215ENST00000590574 A0A087WSZ3 146 aa11.48□□□□□ -0.57
SMARCA4-215ENST00000590574 Q6ZRP5 223 aa11.48□□□□□ -0.57
SMARCA4-215ENST00000590574 Q9BRP9 147 aa11.48□□□□□ -0.57
SMARCA4-215ENST00000590574 TNRC18O15417 2968 aaPredicted RBP11.47□□□□□ -0.57
SMARCA4-215ENST00000590574 SMIM29Q86T20 159 aa11.47□□□□□ -0.57
SMARCA4-215ENST00000590574 PRR34Q9NV39 138 aa11.46□□□□□ -0.57
SMARCA4-215ENST00000590574 CHKB-CPT1BH3BT56 60 aa11.46□□□□□ -0.57
SMARCA4-215ENST00000590574 TM2D3Q9BRN9 247 aa11.45□□□□□ -0.58
SMARCA4-215ENST00000590574 LINC00208Q96KT6 92 aa11.44□□□□□ -0.58
SMARCA4-215ENST00000590574 LINC00474Q9P2X8 69 aa11.44□□□□□ -0.58
SMARCA4-215ENST00000590574 KRTAP1-1Q07627 177 aa11.43□□□□□ -0.58
SMARCA4-215ENST00000590574 Q6ZRX8 168 aa11.43□□□□□ -0.58
SMARCA4-215ENST00000590574 HCG22E2RYF7 251 aa11.43□□□□□ -0.58
SMARCA4-215ENST00000590574 C4orf26Q17RF5 130 aa11.42□□□□□ -0.58
SMARCA4-215ENST00000590574 ST20-AS1Q8NBB2 130 aa11.41□□□□□ -0.58
SMARCA4-215ENST00000590574 CENPEQ02224 2701 aa11.41□□□□□ -0.58
SMARCA4-215ENST00000590574 KALRNO60229 2985 aa11.41□□□□□ -0.58
SMARCA4-215ENST00000590574 OBSCN-AS1Q96MR7 158 aa11.4□□□□□ -0.58
SMARCA4-215ENST00000590574 FASNP49327 2511 aaKnown RBP11.4□□□□□ -0.58
SMARCA4-215ENST00000590574 LOC400499M0QZD8 3231 aa11.4□□□□□ -0.59
SMARCA4-215ENST00000590574 CASC2Q6XLA1 102 aa11.39□□□□□ -0.59
SMARCA4-215ENST00000590574 ZNF706Q9Y5V0 76 aaPredicted RBP11.39□□□□□ -0.59
SMARCA4-215ENST00000590574 SERTAD4-AS1Q5TG53 156 aa11.39□□□□□ -0.59
SMARCA4-215ENST00000590574 LRBAP50851 2863 aa11.38□□□□□ -0.59
SMARCA4-215ENST00000590574 WDFY3Q8IZQ1 3526 aa11.38□□□□□ -0.59
SMARCA4-215ENST00000590574 SPINK6Q6UWN8 80 aa11.38□□□□□ -0.59
SMARCA4-215ENST00000590574 V9GYY9 64 aa11.38□□□□□ -0.59
SMARCA4-215ENST00000590574 FLNAP21333 2647 aaKnown RBP11.38□□□□□ -0.59
SMARCA4-215ENST00000590574 LINC00528Q8N1L1 170 aa11.38□□□□□ -0.59
SMARCA4-215ENST00000590574 FAM168BA1KXE4 195 aa11.37□□□□□ -0.59
SMARCA4-215ENST00000590574 C15orf56Q8N910 161 aa11.37□□□□□ -0.59
SMARCA4-215ENST00000590574 LINC00588Q9Y4M8 146 aa11.37□□□□□ -0.59
SMARCA4-215ENST00000590574 SPTSSBQ8NFR3 76 aa11.36□□□□□ -0.59
SMARCA4-215ENST00000590574 Q8NBF4 154 aa11.36□□□□□ -0.59
SMARCA4-215ENST00000590574 KRTAP24-1Q3LI83 254 aa11.35□□□□□ -0.59
SMARCA4-215ENST00000590574 CR1P17927 2039 aa11.34□□□□□ -0.59
SMARCA4-215ENST00000590574 MAP1AP78559 2803 aaPredicted RBP11.34□□□□□ -0.59
SMARCA4-215ENST00000590574 A0A1B0GW54 56 aa11.33□□□□□ -0.6
SMARCA4-215ENST00000590574 KRTAP10-11P60412 298 aa11.33□□□□□ -0.6
SMARCA4-215ENST00000590574 LINC00476Q8WZB0 136 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms