RNA–Protein interactions for RNA: ENST00000590347.5

CIRBP-228, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 3,117 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-228ENST00000590347 HIGD2AQ9BW72 106 aa10.47□□□□□ -0.73
CIRBP-228ENST00000590347 TRBV7-4A0A0J9YYF1 115 aa10.47□□□□□ -0.73
CIRBP-228ENST00000590347 TMEM89A2RUT3 159 aa10.47□□□□□ -0.73
CIRBP-228ENST00000590347 A8MU10 97 aa10.46□□□□□ -0.73
CIRBP-228ENST00000590347 BPY2O14599 106 aa10.46□□□□□ -0.73
CIRBP-228ENST00000590347 INSP01308 110 aa10.46□□□□□ -0.73
CIRBP-228ENST00000590347 H3BUA1 57 aa10.46□□□□□ -0.74
CIRBP-228ENST00000590347 IGHV4-31P0DP07 118 aa10.45□□□□□ -0.74
CIRBP-228ENST00000590347 CELA1Q9UNI1 258 aa10.45□□□□□ -0.74
CIRBP-228ENST00000590347 UNC79Q9P2D8 2635 aa10.45□□□□□ -0.74
CIRBP-228ENST00000590347 TRBV10-3A0A0K0K1G6 114 aa10.45□□□□□ -0.74
CIRBP-228ENST00000590347 MAP6D1Q9H9H5 199 aa10.45□□□□□ -0.74
CIRBP-228ENST00000590347 F8P00451 2351 aa10.45□□□□□ -0.74
CIRBP-228ENST00000590347 LINC00269Q8N2A0 174 aa10.44□□□□□ -0.74
CIRBP-228ENST00000590347 LINC01006Q8NI28 216 aa10.44□□□□□ -0.74
CIRBP-228ENST00000590347 LY6G6DO95868 133 aa10.44□□□□□ -0.74
CIRBP-228ENST00000590347 DEFB113Q30KQ7 82 aa10.44□□□□□ -0.74
CIRBP-228ENST00000590347 C1orf158Q8N1D5 194 aa10.44□□□□□ -0.74
CIRBP-228ENST00000590347 FAM19A3Q7Z5A8 133 aa10.43□□□□□ -0.74
CIRBP-228ENST00000590347 FUSP35637 526 aaKnown RBP eCLIP10.42□□□□□ -0.74
CIRBP-228ENST00000590347 DSCR9P59020 149 aa10.42□□□□□ -0.74
CIRBP-228ENST00000590347 RETNQ9HD89 108 aa10.42□□□□□ -0.74
CIRBP-228ENST00000590347 ESRGQ1W209 222 aa10.41□□□□□ -0.74
CIRBP-228ENST00000590347 DYNLRB2Q8TF09 96 aa10.41□□□□□ -0.74
CIRBP-228ENST00000590347 LINC00167Q96N53 147 aa10.41□□□□□ -0.74
CIRBP-228ENST00000590347 WFDC10AQ9H1F0 79 aa10.41□□□□□ -0.74
CIRBP-228ENST00000590347 TRGV4A0A0C4DH28 118 aa10.4□□□□□ -0.74
CIRBP-228ENST00000590347 LINC00959A0A1B0GUT2 108 aa10.4□□□□□ -0.75
CIRBP-228ENST00000590347 PMAIP1Q13794 54 aa10.4□□□□□ -0.75
CIRBP-228ENST00000590347 LINC00575Q6W349 94 aa10.4□□□□□ -0.75
CIRBP-228ENST00000590347 A0A1W2PRX2 142 aa10.38□□□□□ -0.75
CIRBP-228ENST00000590347 PRYO14603 147 aa10.38□□□□□ -0.75
CIRBP-228ENST00000590347 ZNF561-AS1K7EIQ3 104 aa10.38□□□□□ -0.75
CIRBP-228ENST00000590347 MUC7Q8TAX7 377 aa10.38□□□□□ -0.75
CIRBP-228ENST00000590347 FAM30AQ9NZY2 134 aa10.38□□□□□ -0.75
CIRBP-228ENST00000590347 C3orf84H3BNL1 204 aa10.37□□□□□ -0.75
CIRBP-228ENST00000590347 C10orf25Q5T742 122 aa10.37□□□□□ -0.75
CIRBP-228ENST00000590347 STHQ8IWL8 128 aa10.37□□□□□ -0.75
CIRBP-228ENST00000590347 IGHV4-28A0A0C4DH34 117 aa10.36□□□□□ -0.75
CIRBP-228ENST00000590347 CD164L2Q6UWJ8 174 aa10.36□□□□□ -0.75
CIRBP-228ENST00000590347 C6orf223Q8N319 242 aa10.36□□□□□ -0.75
CIRBP-228ENST00000590347 HIVEP2P31629 2446 aa10.36□□□□□ -0.75
CIRBP-228ENST00000590347 ZNF702PQ9H963 129 aa10.36□□□□□ -0.75
CIRBP-228ENST00000590347 PDZD2O15018 2839 aa10.35□□□□□ -0.75
CIRBP-228ENST00000590347 DEFB130BP0DP73 79 aa10.35□□□□□ -0.75
CIRBP-228ENST00000590347 DEFB130AP0DP74 79 aa10.35□□□□□ -0.75
CIRBP-228ENST00000590347 Q6YL49 198 aa10.35□□□□□ -0.75
CIRBP-228ENST00000590347 TRBV6-8A0A0A6YYG3 113 aa10.35□□□□□ -0.75
CIRBP-228ENST00000590347 ODF3L2Q3SX64 289 aa10.34□□□□□ -0.75
CIRBP-228ENST00000590347 ESM1Q9NQ30 184 aa10.34□□□□□ -0.75
CIRBP-228ENST00000590347 NDUFC1O43677 76 aa10.33□□□□□ -0.76
CIRBP-228ENST00000590347 XAGE1AQ9HD64 81 aa10.33□□□□□ -0.76
CIRBP-228ENST00000590347 Q6ZTC4 211 aa10.33□□□□□ -0.76
CIRBP-228ENST00000590347 KRTAP1-3Q8IUG1 177 aa10.33□□□□□ -0.76
CIRBP-228ENST00000590347 KLK12Q9UKR0 248 aa10.33□□□□□ -0.76
CIRBP-228ENST00000590347 FLNBO75369 2602 aaKnown RBP10.32□□□□□ -0.76
CIRBP-228ENST00000590347 SMR3AQ99954 134 aa10.32□□□□□ -0.76
CIRBP-228ENST00000590347 LOC110117498A0A087WWA1 95 aa10.31□□□□□ -0.76
CIRBP-228ENST00000590347 CXCL6P80162 114 aa10.31□□□□□ -0.76
CIRBP-228ENST00000590347 Q6ZRP5 223 aa10.31□□□□□ -0.76
CIRBP-228ENST00000590347 UNQ6190/PRO20217Q6UXQ8 127 aa10.3□□□□□ -0.76
CIRBP-228ENST00000590347 OTOGQ6ZRI0 2925 aa10.29□□□□□ -0.76
CIRBP-228ENST00000590347 PLAC8L1A1L4L8 177 aa10.28□□□□□ -0.76
CIRBP-228ENST00000590347 LINC00612Q8N6U2 182 aa10.28□□□□□ -0.76
CIRBP-228ENST00000590347 BCE1O60756 84 aa10.27□□□□□ -0.77
CIRBP-228ENST00000590347 FSHBP01225 129 aa10.27□□□□□ -0.77
CIRBP-228ENST00000590347 ATP5EP56381 51 aaPredicted RBP10.27□□□□□ -0.77
CIRBP-228ENST00000590347 C1orf64Q8NEQ6 169 aa10.27□□□□□ -0.77
CIRBP-228ENST00000590347 IGKV4-1P06312 121 aa10.27□□□□□ -0.77
CIRBP-228ENST00000590347 DEFB114Q30KQ6 69 aa10.26□□□□□ -0.77
CIRBP-228ENST00000590347 SMIM29Q86T20 159 aa10.26□□□□□ -0.77
CIRBP-228ENST00000590347 DEFB105AQ8NG35 78 aa10.26□□□□□ -0.77
CIRBP-228ENST00000590347 OCR1Q9BZK8 76 aa10.26□□□□□ -0.77
CIRBP-228ENST00000590347 A8MUN3 132 aa10.25□□□□□ -0.77
CIRBP-228ENST00000590347 Q8IZM0 81 aa10.25□□□□□ -0.77
CIRBP-228ENST00000590347 KMT2BQ9UMN6 2715 aaPredicted RBP10.25□□□□□ -0.77
CIRBP-228ENST00000590347 DNAJC9-AS1A6NH13 148 aa10.24□□□□□ -0.77
CIRBP-228ENST00000590347 GYPEP15421 78 aa10.24□□□□□ -0.77
CIRBP-228ENST00000590347 KIAA0087Q14695 138 aa10.24□□□□□ -0.77
CIRBP-228ENST00000590347 J3QKU1 62 aa10.23□□□□□ -0.77
CIRBP-228ENST00000590347 ANGP03950 147 aaKnown RBP10.23□□□□□ -0.77
CIRBP-228ENST00000590347 hDV103S1A0JD37 113 aa10.22□□□□□ -0.77
CIRBP-228ENST00000590347 CHCHD10Q8WYQ3 142 aaPredicted RBP10.22□□□□□ -0.77
CIRBP-228ENST00000590347 VWFP04275 2813 aa10.22□□□□□ -0.77
CIRBP-228ENST00000590347 SPTSSBQ8NFR3 76 aa10.22□□□□□ -0.77
CIRBP-228ENST00000590347 TRAV22A0A0B4J277 110 aa10.21□□□□□ -0.77
CIRBP-228ENST00000590347 PRR15Q8IV56 129 aa10.21□□□□□ -0.77
CIRBP-228ENST00000590347 DEFB116Q30KQ4 102 aa10.2□□□□□ -0.78
CIRBP-228ENST00000590347 DEFB4AO15263 64 aa10.19□□□□□ -0.78
CIRBP-228ENST00000590347 GIG44P09565 113 aaPredicted RBP10.19□□□□□ -0.78
CIRBP-228ENST00000590347 C9orf66Q5T8R8 295 aa10.18□□□□□ -0.78
CIRBP-228ENST00000590347 ATRQ13535 2644 aa10.18□□□□□ -0.78
CIRBP-228ENST00000590347 DIRC1Q969H9 104 aa10.17□□□□□ -0.78
CIRBP-228ENST00000590347 TENM1Q9UKZ4 2725 aa10.17□□□□□ -0.78
CIRBP-228ENST00000590347 CYSRT1A8MQ03 144 aa10.16□□□□□ -0.78
CIRBP-228ENST00000590347 SPAG11BQ08648 103 aa10.16□□□□□ -0.78
CIRBP-228ENST00000590347 BAHCC1Q9P281 2608 aa10.15□□□□□ -0.78
CIRBP-228ENST00000590347 Q6ZRU5 148 aa10.15□□□□□ -0.78
CIRBP-228ENST00000590347 TEP1Q99973 2627 aaKnown RBP10.15□□□□□ -0.78
CIRBP-228ENST00000590347 ZNF73O43830 326 aaPredicted RBP10.15□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 130.4 ms