RNA–Protein interactions for RNA: ENST00000590260.5

DDX39A-212, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 988 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-212ENST00000590260 DIRC1Q969H9 104 aa10.98□□□□□ -0.65
DDX39A-212ENST00000590260 PMCHL2Q9BQD1 86 aa10.98□□□□□ -0.65
DDX39A-212ENST00000590260 HSPB8Q9UJY1 196 aa10.96□□□□□ -0.65
DDX39A-212ENST00000590260 A0A0U1RRA0 63 aa10.95□□□□□ -0.66
DDX39A-212ENST00000590260 ZNF861PO60384 105 aa10.95□□□□□ -0.66
DDX39A-212ENST00000590260 SFTA2Q6UW10 78 aa10.95□□□□□ -0.66
DDX39A-212ENST00000590260 PRR26Q8N8Z3 221 aa10.94□□□□□ -0.66
DDX39A-212ENST00000590260 BCE1O60756 84 aa10.93□□□□□ -0.66
DDX39A-212ENST00000590260 SMIM13P0DJ93 91 aa10.93□□□□□ -0.66
DDX39A-212ENST00000590260 KRTAP13-1Q8IUC0 172 aa10.93□□□□□ -0.66
DDX39A-212ENST00000590260 NKAPP1Q8N9T2 125 aa10.93□□□□□ -0.66
DDX39A-212ENST00000590260 DPM2O94777 84 aa10.92□□□□□ -0.66
DDX39A-212ENST00000590260 LINC00158P58513 81 aa10.92□□□□□ -0.66
DDX39A-212ENST00000590260 NDUFA12Q9UI09 145 aa10.92□□□□□ -0.66
DDX39A-212ENST00000590260 IGLV1-50A0A075B6I6 118 aa10.91□□□□□ -0.66
DDX39A-212ENST00000590260 IGKV2-28A0A075B6P5 120 aa10.91□□□□□ -0.66
DDX39A-212ENST00000590260 LEPROTO15243 131 aa10.91□□□□□ -0.66
DDX39A-212ENST00000590260 IGKV2D-28P01615 120 aa10.91□□□□□ -0.66
DDX39A-212ENST00000590260 PLNP26678 52 aa10.91□□□□□ -0.66
DDX39A-212ENST00000590260 IGKCP01834 107 aa10.9□□□□□ -0.66
DDX39A-212ENST00000590260 MIR7-3HGQ8N6C7 128 aa10.89□□□□□ -0.67
DDX39A-212ENST00000590260 MAP1LC3CQ9BXW4 147 aa10.89□□□□□ -0.67
DDX39A-212ENST00000590260 TMEM238C9JI98 176 aa10.88□□□□□ -0.67
DDX39A-212ENST00000590260 SYS1-DBNDD2H3BUS1 97 aa10.88□□□□□ -0.67
DDX39A-212ENST00000590260 HERV-K104P63124 156 aa10.88□□□□□ -0.67
DDX39A-212ENST00000590260 COA6Q5JTJ3 125 aaKnown RBP10.88□□□□□ -0.67
DDX39A-212ENST00000590260 RPL24P83731 157 aaKnown RBP10.87□□□□□ -0.67
DDX39A-212ENST00000590260 MEIG1Q5JSS6 88 aa10.87□□□□□ -0.67
DDX39A-212ENST00000590260 MYMXA0A1B0GTQ4 84 aa10.86□□□□□ -0.67
DDX39A-212ENST00000590260 J3QQQ9 107 aa10.86□□□□□ -0.67
DDX39A-212ENST00000590260 M0R378 163 aa10.86□□□□□ -0.67
DDX39A-212ENST00000590260 PLEKHB2Q96CS7 222 aa10.86□□□□□ -0.67
DDX39A-212ENST00000590260 TMEM126AQ9H061 195 aa10.85□□□□□ -0.67
DDX39A-212ENST00000590260 RPL28P46779 137 aaKnown RBP10.84□□□□□ -0.67
DDX39A-212ENST00000590260 LINC01545Q5VT33 79 aa10.84□□□□□ -0.67
DDX39A-212ENST00000590260 DAND5Q8N907 189 aa10.84□□□□□ -0.67
DDX39A-212ENST00000590260 C3orf79P0CE67 100 aa10.82□□□□□ -0.68
DDX39A-212ENST00000590260 PRLHP81277 87 aa10.82□□□□□ -0.68
DDX39A-212ENST00000590260 BOD1L2Q8IYS8 172 aa10.82□□□□□ -0.68
DDX39A-212ENST00000590260 UBR4Q5T4S7 5183 aa10.82□□□□□ -0.68
DDX39A-212ENST00000590260 A0A087X002 238 aa10.81□□□□□ -0.68
DDX39A-212ENST00000590260 LOC107984156A0A0G2JMH3 177 aa10.81□□□□□ -0.68
DDX39A-212ENST00000590260 E9PLD3 99 aa10.81□□□□□ -0.68
DDX39A-212ENST00000590260 HERVK_113P61574 105 aa10.81□□□□□ -0.68
DDX39A-212ENST00000590260 ARL17AQ8IVW1 177 aa10.81□□□□□ -0.68
DDX39A-212ENST00000590260 NCR3O14931 201 aa10.8□□□□□ -0.68
DDX39A-212ENST00000590260 EIF4EBP3O60516 100 aaPredicted RBP10.8□□□□□ -0.68
DDX39A-212ENST00000590260 NMUP48645 174 aa10.8□□□□□ -0.68
DDX39A-212ENST00000590260 PET117Q6UWS5 81 aa10.8□□□□□ -0.68
DDX39A-212ENST00000590260 ANAPC11Q9NYG5 84 aa10.8□□□□□ -0.68
DDX39A-212ENST00000590260 LGALS3P17931 250 aaKnown RBP10.79□□□□□ -0.68
DDX39A-212ENST00000590260 UBE2AP49459 152 aa10.79□□□□□ -0.68
DDX39A-212ENST00000590260 LRP2P98164 4655 aa10.78□□□□□ -0.68
DDX39A-212ENST00000590260 A0A0J9YXY3 114 aa10.78□□□□□ -0.68
DDX39A-212ENST00000590260 LINC00587B1AMM8 73 aa10.78□□□□□ -0.68
DDX39A-212ENST00000590260 ATP6V1G1O75348 118 aa10.78□□□□□ -0.68
DDX39A-212ENST00000590260 ADAMTSL4-AS1Q5T5F5 129 aa10.78□□□□□ -0.68
DDX39A-212ENST00000590260 SOSTDC1Q6X4U4 206 aa10.78□□□□□ -0.68
DDX39A-212ENST00000590260 FAM19A1Q7Z5A9 133 aa10.78□□□□□ -0.68
DDX39A-212ENST00000590260 IGKV2D-26A0A0A0MRZ7 120 aa10.77□□□□□ -0.69
DDX39A-212ENST00000590260 LITAFQ99732 161 aa10.76□□□□□ -0.69
DDX39A-212ENST00000590260 KRTAP4-16G5E9R7 235 aaPredicted RBP10.75□□□□□ -0.69
DDX39A-212ENST00000590260 SPRR1AP35321 89 aa10.75□□□□□ -0.69
DDX39A-212ENST00000590260 KRTAP13-2Q52LG2 175 aa10.75□□□□□ -0.69
DDX39A-212ENST00000590260 TTTY13Q9BZ97 58 aa10.75□□□□□ -0.69
DDX39A-212ENST00000590260 TRBV10-3A0A0K0K1G6 114 aa10.74□□□□□ -0.69
DDX39A-212ENST00000590260 S100A1P23297 94 aa10.73□□□□□ -0.69
DDX39A-212ENST00000590260 RPL13AP40429 203 aaKnown RBP10.73□□□□□ -0.69
DDX39A-212ENST00000590260 KRTDAPP60985 99 aa10.73□□□□□ -0.69
DDX39A-212ENST00000590260 KCNQ1DNQ9H478 68 aa10.73□□□□□ -0.69
DDX39A-212ENST00000590260 PRYO14603 147 aa10.72□□□□□ -0.69
DDX39A-212ENST00000590260 LPAP08519 4548 aa10.72□□□□□ -0.69
DDX39A-212ENST00000590260 NPC2P61916 151 aa10.71□□□□□ -0.69
DDX39A-212ENST00000590260 TRBV10-2A0A0K0K1G8 114 aa10.69□□□□□ -0.7
DDX39A-212ENST00000590260 CRYGAP11844 174 aa10.69□□□□□ -0.7
DDX39A-212ENST00000590260 ANKRD39Q53RE8 183 aa10.69□□□□□ -0.7
DDX39A-212ENST00000590260 LINC00337Q8N6G1 96 aa10.69□□□□□ -0.7
DDX39A-212ENST00000590260 NDUFC2O95298 119 aa10.68□□□□□ -0.7
DDX39A-212ENST00000590260 HIST3H2BBQ8N257 126 aa10.68□□□□□ -0.7
DDX39A-212ENST00000590260 HIGD2AQ9BW72 106 aa10.68□□□□□ -0.7
DDX39A-212ENST00000590260 FAM229BQ4G0N7 80 aa10.67□□□□□ -0.7
DDX39A-212ENST00000590260 ATOH7Q8N100 152 aa10.67□□□□□ -0.7
DDX39A-212ENST00000590260 ZNF815PA8K554 130 aa10.66□□□□□ -0.7
DDX39A-212ENST00000590260 IGLV6-57P01721 117 aa10.66□□□□□ -0.7
DDX39A-212ENST00000590260 DDTP30046 118 aa10.66□□□□□ -0.7
DDX39A-212ENST00000590260 SPANXB1Q9NS25 103 aaPredicted RBP10.66□□□□□ -0.7
DDX39A-212ENST00000590260 TIMM17BO60830 172 aa10.65□□□□□ -0.7
DDX39A-212ENST00000590260 TYMSOSQ8TAI1 123 aa10.65□□□□□ -0.7
DDX39A-212ENST00000590260 LINC00308Q8TCZ7 52 aa10.65□□□□□ -0.7
DDX39A-212ENST00000590260 SMCR5Q8TEV8 140 aa10.65□□□□□ -0.7
DDX39A-212ENST00000590260 SPRR4Q96PI1 79 aa10.65□□□□□ -0.7
DDX39A-212ENST00000590260 B5MCH6 92 aa10.64□□□□□ -0.71
DDX39A-212ENST00000590260 HIST1H2BLQ99880 126 aa10.64□□□□□ -0.71
DDX39A-212ENST00000590260 MIEN1Q9BRT3 115 aa10.64□□□□□ -0.71
DDX39A-212ENST00000590260 C3orf22Q8N5N4 141 aa10.63□□□□□ -0.71
DDX39A-212ENST00000590260 ERC2-IT1O76042 136 aa10.61□□□□□ -0.71
DDX39A-212ENST00000590260 Q9BRP9 147 aa10.61□□□□□ -0.71
DDX39A-212ENST00000590260 ETDCA0A1B0GVM5 59 aa10.6□□□□□ -0.71
DDX39A-212ENST00000590260 C20orf202A1L168 122 aa10.6□□□□□ -0.71
DDX39A-212ENST00000590260 TSPAN13O95857 204 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms