RNA–Protein interactions for RNA: ENST00000589797.5

RETREG3-208, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 4,149 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-208ENST00000589797 COX7BP24311 80 aa10.1□□□□□ -0.79
RETREG3-208ENST00000589797 TRAV10A0A0B4J240 114 aa10.1□□□□□ -0.79
RETREG3-208ENST00000589797 TMEM256-PLSCR3K7ERE1 68 aa10.09□□□□□ -0.79
RETREG3-208ENST00000589797 C10orf25Q5T742 122 aa10.09□□□□□ -0.79
RETREG3-208ENST00000589797 A0A1B0GUV1 79 aa10.08□□□□□ -0.8
RETREG3-208ENST00000589797 CITED1Q99966 193 aa10.08□□□□□ -0.8
RETREG3-208ENST00000589797 PLAC8L1A1L4L8 177 aa10.08□□□□□ -0.8
RETREG3-208ENST00000589797 TRBV10-3A0A0K0K1G6 114 aa10.06□□□□□ -0.8
RETREG3-208ENST00000589797 SBSPONQ8IVN8 264 aa10.06□□□□□ -0.8
RETREG3-208ENST00000589797 ESRGQ1W209 222 aa10.06□□□□□ -0.8
RETREG3-208ENST00000589797 ACYP1P07311 99 aa10.05□□□□□ -0.8
RETREG3-208ENST00000589797 Q8NAQ8 132 aa10.05□□□□□ -0.8
RETREG3-208ENST00000589797 A0A1B0GX51 115 aa10.05□□□□□ -0.8
RETREG3-208ENST00000589797 JMJD7-PLA2G4BH0Y9G9 81 aa10.05□□□□□ -0.8
RETREG3-208ENST00000589797 TRAV23DV6A0A075B6W5 121 aa10.04□□□□□ -0.8
RETREG3-208ENST00000589797 WFDC9Q8NEX5 89 aa10.04□□□□□ -0.8
RETREG3-208ENST00000589797 LITAFQ99732 161 aa10.03□□□□□ -0.8
RETREG3-208ENST00000589797 PRO0461Q9UI25 63 aa10.02□□□□□ -0.8
RETREG3-208ENST00000589797 IGLV5-45A0A087WSX0 123 aa10.02□□□□□ -0.81
RETREG3-208ENST00000589797 Q6ZRU5 148 aa10.02□□□□□ -0.81
RETREG3-208ENST00000589797 FAM218AQ96MZ4 157 aa10.02□□□□□ -0.81
RETREG3-208ENST00000589797 RPL28P46779 137 aaKnown RBP10.01□□□□□ -0.81
RETREG3-208ENST00000589797 LINC00643Q86TS7 51 aa10.01□□□□□ -0.81
RETREG3-208ENST00000589797 NREPQ16612 68 aa10□□□□□ -0.81
RETREG3-208ENST00000589797 PPDPFQ9H3Y8 114 aa10□□□□□ -0.81
RETREG3-208ENST00000589797 C3orf84H3BNL1 204 aa10□□□□□ -0.81
RETREG3-208ENST00000589797 ZNF73O43830 326 aaPredicted RBP10□□□□□ -0.81
RETREG3-208ENST00000589797 NDUFV3P56181 108 aaKnown RBP9.99□□□□□ -0.81
RETREG3-208ENST00000589797 TENM4Q6N022 2769 aa9.99□□□□□ -0.81
RETREG3-208ENST00000589797 USP17L23D6RBM5 183 aa9.99□□□□□ -0.81
RETREG3-208ENST00000589797 KRTAP10-11P60412 298 aa9.98□□□□□ -0.81
RETREG3-208ENST00000589797 ENHOQ6UWT2 76 aa9.98□□□□□ -0.81
RETREG3-208ENST00000589797 UBE2AP49459 152 aa9.98□□□□□ -0.81
RETREG3-208ENST00000589797 KLK5Q9Y337 293 aaPredicted RBP9.98□□□□□ -0.81
RETREG3-208ENST00000589797 FAM19A1Q7Z5A9 133 aa9.98□□□□□ -0.81
RETREG3-208ENST00000589797 FUSP35637 526 aaKnown RBP eCLIP9.97□□□□□ -0.81
RETREG3-208ENST00000589797 STAB2Q8WWQ8 2551 aa9.97□□□□□ -0.81
RETREG3-208ENST00000589797 COX17Q14061 63 aa9.97□□□□□ -0.81
RETREG3-208ENST00000589797 A0A087WVE0 104 aa9.96□□□□□ -0.82
RETREG3-208ENST00000589797 CCKP06307 115 aa9.96□□□□□ -0.82
RETREG3-208ENST00000589797 Q8N814 137 aa9.96□□□□□ -0.82
RETREG3-208ENST00000589797 ZFHX3Q15911 3703 aa9.96□□□□□ -0.82
RETREG3-208ENST00000589797 CDIP1Q9H305 208 aa9.95□□□□□ -0.82
RETREG3-208ENST00000589797 NBPF19A0A087WUL8 3843 aa9.94□□□□□ -0.82
RETREG3-208ENST00000589797 M0R378 163 aa9.94□□□□□ -0.82
RETREG3-208ENST00000589797 FBN1P35555 2871 aaKnown RBP9.94□□□□□ -0.82
RETREG3-208ENST00000589797 IL17DQ8TAD2 202 aa9.93□□□□□ -0.82
RETREG3-208ENST00000589797 BSNQ9UPA5 3926 aa9.93□□□□□ -0.82
RETREG3-208ENST00000589797 EGFEM1PQ0D2K5 195 aa9.93□□□□□ -0.82
RETREG3-208ENST00000589797 C6orf48Q9UBA6 75 aa9.93□□□□□ -0.82
RETREG3-208ENST00000589797 FAM104AQ969W3 186 aa9.92□□□□□ -0.82
RETREG3-208ENST00000589797 TENM1Q9UKZ4 2725 aa9.92□□□□□ -0.82
RETREG3-208ENST00000589797 NDUFC2-KCTD14E9PQ53 114 aa9.91□□□□□ -0.82
RETREG3-208ENST00000589797 UPK3BQ9BT76 320 aa9.91□□□□□ -0.82
RETREG3-208ENST00000589797 OTOGQ6ZRI0 2925 aa9.91□□□□□ -0.82
RETREG3-208ENST00000589797 VWFP04275 2813 aa9.89□□□□□ -0.83
RETREG3-208ENST00000589797 LY6G6CO95867 125 aa9.88□□□□□ -0.83
RETREG3-208ENST00000589797 LRCOL1A6NCL2 159 aa9.88□□□□□ -0.83
RETREG3-208ENST00000589797 CCDC179H3BU77 68 aa9.88□□□□□ -0.83
RETREG3-208ENST00000589797 LINC00846Q9NV44 126 aa9.88□□□□□ -0.83
RETREG3-208ENST00000589797 CDK2AP2O75956 126 aa9.87□□□□□ -0.83
RETREG3-208ENST00000589797 ATOX1O00244 68 aa9.86□□□□□ -0.83
RETREG3-208ENST00000589797 C20orf197Q8N268 126 aa9.86□□□□□ -0.83
RETREG3-208ENST00000589797 BPY2O14599 106 aa9.86□□□□□ -0.83
RETREG3-208ENST00000589797 C3orf22Q8N5N4 141 aa9.84□□□□□ -0.83
RETREG3-208ENST00000589797 LINC00588Q9Y4M8 146 aa9.84□□□□□ -0.83
RETREG3-208ENST00000589797 LINC00575Q6W349 94 aa9.83□□□□□ -0.84
RETREG3-208ENST00000589797 M0QXV9 152 aa9.83□□□□□ -0.84
RETREG3-208ENST00000589797 NDUFC2O95298 119 aa9.83□□□□□ -0.84
RETREG3-208ENST00000589797 LOC107984640A0A0U1RRK4 108 aa9.82□□□□□ -0.84
RETREG3-208ENST00000589797 LINC01556Q5JQF7 62 aa9.82□□□□□ -0.84
RETREG3-208ENST00000589797 HRCT1Q6UXD1 115 aa9.82□□□□□ -0.84
RETREG3-208ENST00000589797 NDUFS5O43920 106 aa9.81□□□□□ -0.84
RETREG3-208ENST00000589797 PRLHP81277 87 aa9.81□□□□□ -0.84
RETREG3-208ENST00000589797 PDZD2O15018 2839 aa9.81□□□□□ -0.84
RETREG3-208ENST00000589797 KIAA0087Q14695 138 aa9.81□□□□□ -0.84
RETREG3-208ENST00000589797 K7EIL1 84 aa9.8□□□□□ -0.84
RETREG3-208ENST00000589797 C14orf177Q52M58 125 aa9.8□□□□□ -0.84
RETREG3-208ENST00000589797 PDE6GP18545 87 aa9.79□□□□□ -0.84
RETREG3-208ENST00000589797 DEFB116Q30KQ4 102 aa9.79□□□□□ -0.84
RETREG3-208ENST00000589797 H0Y9J4 135 aa9.78□□□□□ -0.84
RETREG3-208ENST00000589797 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.78□□□□□ -0.84
RETREG3-208ENST00000589797 LINC00612Q8N6U2 182 aa9.78□□□□□ -0.84
RETREG3-208ENST00000589797 Q6ZRP5 223 aa9.78□□□□□ -0.84
RETREG3-208ENST00000589797 C7orf33Q8WU49 177 aa9.78□□□□□ -0.84
RETREG3-208ENST00000589797 Q8N9L7 120 aa9.77□□□□□ -0.85
RETREG3-208ENST00000589797 C22orf24Q9Y442 160 aa9.77□□□□□ -0.85
RETREG3-208ENST00000589797 FAM168BA1KXE4 195 aa9.77□□□□□ -0.85
RETREG3-208ENST00000589797 FAM240AA0A1B0GVK7 77 aa9.76□□□□□ -0.85
RETREG3-208ENST00000589797 C2orf48Q96LS8 159 aa9.76□□□□□ -0.85
RETREG3-208ENST00000589797 SNURFQ9Y675 71 aa9.76□□□□□ -0.85
RETREG3-208ENST00000589797 IGLV9-49A0A0B4J1Y8 123 aa9.75□□□□□ -0.85
RETREG3-208ENST00000589797 MRPL55Q7Z7F7 128 aaKnown RBP9.75□□□□□ -0.85
RETREG3-208ENST00000589797 LINC01561Q8N1V8 128 aa9.75□□□□□ -0.85
RETREG3-208ENST00000589797 C9orf129Q5T035 196 aaKnown RBP9.75□□□□□ -0.85
RETREG3-208ENST00000589797 B9D2Q9BPU9 175 aa9.75□□□□□ -0.85
RETREG3-208ENST00000589797 CHTF8P0CG12 524 aa9.75□□□□□ -0.85
RETREG3-208ENST00000589797 CASC10Q5T4H9 136 aa9.74□□□□□ -0.85
RETREG3-208ENST00000589797 LINC00167Q96N53 147 aa9.74□□□□□ -0.85
RETREG3-208ENST00000589797 MDFIQ99750 246 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 302.6 ms