RNA–Protein interactions for RNA: ENST00000589076.5

SMAD4-207, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-207ENST00000589076 NAA60Q9H7X0 242 aa-0.05□□□□□ -2.42
SMAD4-207ENST00000589076 SCN3BQ9NY72 215 aa-0.05□□□□□ -2.42
SMAD4-207ENST00000589076 RGPD8O14715 1765 aaPredicted RBP-0.05□□□□□ -2.42
SMAD4-207ENST00000589076 RGPD5Q99666 1765 aa-0.05□□□□□ -2.42
SMAD4-207ENST00000589076 NAIPQ13075 1403 aa-0.05□□□□□ -2.42
SMAD4-207ENST00000589076 DNAH8Q96JB1 4490 aa-0.06□□□□□ -2.42
SMAD4-207ENST00000589076 HMGN1P05114 100 aa-0.06□□□□□ -2.42
SMAD4-207ENST00000589076 FAM107BQ9H098 131 aa-0.06□□□□□ -2.42
SMAD4-207ENST00000589076 NKTRP30414 1462 aaKnown RBP-0.06□□□□□ -2.42
SMAD4-207ENST00000589076 MBD5Q9P267 1494 aa-0.06□□□□□ -2.42
SMAD4-207ENST00000589076 QRICH2Q9H0J4 1663 aa-0.06□□□□□ -2.42
SMAD4-207ENST00000589076 A0A0G2JMZ2 1700 aa-0.07□□□□□ -2.42
SMAD4-207ENST00000589076 EPRSP07814 1512 aaKnown RBP-0.07□□□□□ -2.42
SMAD4-207ENST00000589076 M0R135 149 aa-0.07□□□□□ -2.42
SMAD4-207ENST00000589076 GNG7O60262 68 aa-0.07□□□□□ -2.42
SMAD4-207ENST00000589076 BTG2P78543 158 aa-0.07□□□□□ -2.42
SMAD4-207ENST00000589076 MEIG1Q5JSS6 88 aa-0.07□□□□□ -2.42
SMAD4-207ENST00000589076 TTC9CQ8N5M4 171 aa-0.07□□□□□ -2.42
SMAD4-207ENST00000589076 V9GYH0 126 aa-0.07□□□□□ -2.42
SMAD4-207ENST00000589076 NALCNQ8IZF0 1738 aa-0.07□□□□□ -2.42
SMAD4-207ENST00000589076 TRAV22A0A0B4J277 110 aa-0.08□□□□□ -2.42
SMAD4-207ENST00000589076 CTXND1A0A1B0GTU2 59 aa-0.08□□□□□ -2.42
SMAD4-207ENST00000589076 C10orf142B7Z368 130 aa-0.08□□□□□ -2.42
SMAD4-207ENST00000589076 M0R3E3 92 aa-0.08□□□□□ -2.42
SMAD4-207ENST00000589076 SPAG11BQ08648 103 aa-0.08□□□□□ -2.42
SMAD4-207ENST00000589076 SPAG11AQ6PDA7 123 aa-0.08□□□□□ -2.42
SMAD4-207ENST00000589076 SPCS1Q9Y6A9 102 aa-0.08□□□□□ -2.42
SMAD4-207ENST00000589076 TTC37Q6PGP7 1564 aa-0.09□□□□□ -2.42
SMAD4-207ENST00000589076 K7EP13 123 aa-0.09□□□□□ -2.42
SMAD4-207ENST00000589076 COX17Q14061 63 aa-0.09□□□□□ -2.42
SMAD4-207ENST00000589076 WFDC2Q14508 124 aa-0.09□□□□□ -2.42
SMAD4-207ENST00000589076 C1orf54Q8WWF1 131 aa-0.09□□□□□ -2.42
SMAD4-207ENST00000589076 MAP3K1Q13233 1512 aa-0.09□□□□□ -2.42
SMAD4-207ENST00000589076 TEX14Q8IWB6 1497 aa-0.1□□□□□ -2.42
SMAD4-207ENST00000589076 MYO7BQ6PIF6 2116 aa-0.1□□□□□ -2.42
SMAD4-207ENST00000589076 LY75O60449 1722 aa-0.1□□□□□ -2.42
SMAD4-207ENST00000589076 CPSF1Q10570 1443 aaKnown RBP-0.1□□□□□ -2.43
SMAD4-207ENST00000589076 MIF4GDA9UHW6 222 aaKnown RBP-0.1□□□□□ -2.43
SMAD4-207ENST00000589076 FGF7P21781 194 aa-0.1□□□□□ -2.43
SMAD4-207ENST00000589076 S100A3P33764 101 aa-0.1□□□□□ -2.43
SMAD4-207ENST00000589076 Q56UQ5 140 aa-0.1□□□□□ -2.43
SMAD4-207ENST00000589076 ZNF436-AS1Q8NC38 126 aaPredicted RBP-0.1□□□□□ -2.43
SMAD4-207ENST00000589076 PPP3R2Q96LZ3 170 aa-0.1□□□□□ -2.43
SMAD4-207ENST00000589076 POLR1AO95602 1720 aaPredicted RBP-0.1□□□□□ -2.43
SMAD4-207ENST00000589076 PKD1L3Q7Z443 1732 aa-0.1□□□□□ -2.43
SMAD4-207ENST00000589076 PLCH1Q4KWH8 1693 aa-0.11□□□□□ -2.43
SMAD4-207ENST00000589076 HAMPP81172 84 aa-0.11□□□□□ -2.43
SMAD4-207ENST00000589076 AMELXQ99217 191 aa-0.11□□□□□ -2.43
SMAD4-207ENST00000589076 TOPAZ1Q8N9V7 1692 aa-0.11□□□□□ -2.43
SMAD4-207ENST00000589076 USF3Q68DE3 2245 aa-0.11□□□□□ -2.43
SMAD4-207ENST00000589076 ABCA6Q8N139 1617 aa-0.12□□□□□ -2.43
SMAD4-207ENST00000589076 Q8IZM0 81 aa-0.12□□□□□ -2.43
SMAD4-207ENST00000589076 MGST2Q99735 147 aa-0.12□□□□□ -2.43
SMAD4-207ENST00000589076 NDUFA4L2Q9NRX3 87 aa-0.12□□□□□ -2.43
SMAD4-207ENST00000589076 RAPGEF2Q9Y4G8 1499 aa-0.12□□□□□ -2.43
SMAD4-207ENST00000589076 BTAF1O14981 1849 aa-0.13□□□□□ -2.43
SMAD4-207ENST00000589076 MAST1Q9Y2H9 1570 aa-0.13□□□□□ -2.43
SMAD4-207ENST00000589076 PLEKHH2Q8IVE3 1493 aa-0.13□□□□□ -2.43
SMAD4-207ENST00000589076 APOC2P02655 101 aa-0.13□□□□□ -2.43
SMAD4-207ENST00000589076 DEFB109BQ30KR1 87 aa-0.13□□□□□ -2.43
SMAD4-207ENST00000589076 DYNLRB1Q9NP97 96 aa-0.13□□□□□ -2.43
SMAD4-207ENST00000589076 FMN2Q9NZ56 1722 aa-0.13□□□□□ -2.43
SMAD4-207ENST00000589076 A2ML1A8K2U0 1454 aa-0.14□□□□□ -2.43
SMAD4-207ENST00000589076 TRBV7-3A0A075B6L6 115 aa-0.14□□□□□ -2.43
SMAD4-207ENST00000589076 UQCR11O14957 56 aa-0.14□□□□□ -2.43
SMAD4-207ENST00000589076 BCE1O60756 84 aa-0.14□□□□□ -2.43
SMAD4-207ENST00000589076 TPPP2P59282 170 aa-0.14□□□□□ -2.43
SMAD4-207ENST00000589076 CATR1Q13166 79 aa-0.14□□□□□ -2.43
SMAD4-207ENST00000589076 TMEM170BQ5T4T1 132 aa-0.14□□□□□ -2.43
SMAD4-207ENST00000589076 BAGE2Q86Y30 109 aa-0.14□□□□□ -2.43
SMAD4-207ENST00000589076 C8orf59Q8N0T1 100 aaPredicted RBP-0.14□□□□□ -2.43
SMAD4-207ENST00000589076 ITSN1Q15811 1721 aa-0.14□□□□□ -2.43
SMAD4-207ENST00000589076 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP-0.14□□□□□ -2.433e-12■□□□□ 9.1
SMAD4-207ENST00000589076 KTN1Q86UP2 1357 aaKnown RBP-0.15□□□□□ -2.43
SMAD4-207ENST00000589076 SSSCA1O60232 199 aa-0.15□□□□□ -2.43
SMAD4-207ENST00000589076 APOC3P02656 99 aa-0.15□□□□□ -2.43
SMAD4-207ENST00000589076 SPANXDQ9BXN6 97 aa-0.15□□□□□ -2.43
SMAD4-207ENST00000589076 KNDC1Q76NI1 1749 aa-0.16□□□□□ -2.43
SMAD4-207ENST00000589076 C3P01024 1663 aa-0.16□□□□□ -2.44
SMAD4-207ENST00000589076 LOC100130705A0A1B0GUX0 176 aa-0.16□□□□□ -2.44
SMAD4-207ENST00000589076 F8VRH5 84 aa-0.16□□□□□ -2.44
SMAD4-207ENST00000589076 IFNGP01579 166 aa-0.16□□□□□ -2.44
SMAD4-207ENST00000589076 COMMD6Q7Z4G1 85 aa-0.16□□□□□ -2.44
SMAD4-207ENST00000589076 C5orf38Q86SI9 138 aa-0.16□□□□□ -2.44
SMAD4-207ENST00000589076 TP53AIP1Q9HCN2 124 aa-0.16□□□□□ -2.44
SMAD4-207ENST00000589076 EIF4G3O43432 1585 aaKnown RBP-0.17□□□□□ -2.44
SMAD4-207ENST00000589076 AKAIN1P0CW23 69 aa-0.17□□□□□ -2.44
SMAD4-207ENST00000589076 DCDP81605 110 aaKnown RBP-0.17□□□□□ -2.44
SMAD4-207ENST00000589076 ARHGEF5Q12774 1597 aa-0.17□□□□□ -2.44
SMAD4-207ENST00000589076 Q6JHZ5 121 aa-0.17□□□□□ -2.44
SMAD4-207ENST00000589076 TSLPQ969D9 159 aa-0.17□□□□□ -2.44
SMAD4-207ENST00000589076 LINC00472Q9H8W2 130 aa-0.17□□□□□ -2.44
SMAD4-207ENST00000589076 SCN11AQ9UI33 1791 aa-0.17□□□□□ -2.44
SMAD4-207ENST00000589076 ARHGEF12Q9NZN5 1544 aa-0.18□□□□□ -2.44
SMAD4-207ENST00000589076 LOC285095A0A1B0GVY8 99 aa-0.18□□□□□ -2.44
SMAD4-207ENST00000589076 IGLC7A0M8Q6 106 aa-0.18□□□□□ -2.44
SMAD4-207ENST00000589076 I3L2K1 104 aa-0.18□□□□□ -2.44
SMAD4-207ENST00000589076 PP6455Q8WZ26 134 aa-0.18□□□□□ -2.44
SMAD4-207ENST00000589076 ROCK2O75116 1388 aaKnown RBP-0.19□□□□□ -2.44
SMAD4-207ENST00000589076 FXYD6-FXYD2A0A087WZ82 144 aa-0.19□□□□□ -2.44
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms