RNA–Protein interactions for RNA: ENST00000588860.5

SMAD4-206, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-206ENST00000588860 DYNC2H1Q8NCM8 4307 aaKnown RBP5.85□□□□□ -1.47
SMAD4-206ENST00000588860 TRAV13-2A0A0B4J235 113 aa5.85□□□□□ -1.47
SMAD4-206ENST00000588860 NHLRC4P0CG21 123 aaPredicted RBP5.85□□□□□ -1.47
SMAD4-206ENST00000588860 COX17Q14061 63 aa5.85□□□□□ -1.47
SMAD4-206ENST00000588860 C9orf116Q5BN46 136 aaPredicted RBP5.85□□□□□ -1.47
SMAD4-206ENST00000588860 C10orf25Q5T742 122 aa5.85□□□□□ -1.47
SMAD4-206ENST00000588860 MTURNQ8N3F0 131 aa5.85□□□□□ -1.47
SMAD4-206ENST00000588860 NTN5Q8WTR8 489 aaPredicted RBP5.85□□□□□ -1.47
SMAD4-206ENST00000588860 DNAH9Q9NYC9 4486 aa5.85□□□□□ -1.47
SMAD4-206ENST00000588860 IGKV2-28A0A075B6P5 120 aa5.84□□□□□ -1.47
SMAD4-206ENST00000588860 ZNF561-AS1K7EIQ3 104 aa5.84□□□□□ -1.47
SMAD4-206ENST00000588860 IGKV2D-28P01615 120 aa5.84□□□□□ -1.47
SMAD4-206ENST00000588860 COX6CP09669 75 aa5.84□□□□□ -1.47
SMAD4-206ENST00000588860 ATXN8Q156A1 80 aa5.84□□□□□ -1.47
SMAD4-206ENST00000588860 C15orf56Q8N910 161 aa5.84□□□□□ -1.47
SMAD4-206ENST00000588860 UPK3BQ9BT76 320 aa5.84□□□□□ -1.47
SMAD4-206ENST00000588860 PRO0461Q9UI25 63 aa5.84□□□□□ -1.47
SMAD4-206ENST00000588860 PCLOQ9Y6V0 5065 aa5.84□□□□□ -1.47
SMAD4-206ENST00000588860 GVQW2A0A096LPI5 108 aaPredicted RBP5.83□□□□□ -1.48
SMAD4-206ENST00000588860 F8W1H4 67 aa5.83□□□□□ -1.48
SMAD4-206ENST00000588860 WFDC2Q14508 124 aa5.83□□□□□ -1.48
SMAD4-206ENST00000588860 UBE2DNLQ8IWF7 75 aa5.83□□□□□ -1.48
SMAD4-206ENST00000588860 LINC00337Q8N6G1 96 aa5.83□□□□□ -1.48
SMAD4-206ENST00000588860 CAMK2N2Q96S95 79 aa5.83□□□□□ -1.48
SMAD4-206ENST00000588860 CLEC2BQ92478 149 aa5.82□□□□□ -1.48
SMAD4-206ENST00000588860 RMI2Q96E14 147 aa5.82□□□□□ -1.48
SMAD4-206ENST00000588860 C6orf48Q9UBA6 75 aa5.82□□□□□ -1.48
SMAD4-206ENST00000588860 APLNQ9ULZ1 77 aa5.82□□□□□ -1.48
SMAD4-206ENST00000588860 SACSQ9NZJ4 4579 aa5.82□□□□□ -1.48
SMAD4-206ENST00000588860 DNAH1Q9P2D7 4330 aa5.81□□□□□ -1.48
SMAD4-206ENST00000588860 KRTAP9-7A8MTY7 169 aa5.81□□□□□ -1.48
SMAD4-206ENST00000588860 KRTAP19-4Q3LI73 84 aa5.81□□□□□ -1.48
SMAD4-206ENST00000588860 OR13C6PQ8NH95 151 aa5.81□□□□□ -1.48
SMAD4-206ENST00000588860 MUC7Q8TAX7 377 aa5.81□□□□□ -1.48
SMAD4-206ENST00000588860 C2orf48Q96LS8 159 aa5.81□□□□□ -1.48
SMAD4-206ENST00000588860 RYR1P21817 5038 aa5.81□□□□□ -1.48
SMAD4-206ENST00000588860 STAB2Q8WWQ8 2551 aa5.8□□□□□ -1.48
SMAD4-206ENST00000588860 NUPR2A6NF83 97 aa5.8□□□□□ -1.48
SMAD4-206ENST00000588860 C9JAW5 83 aa5.8□□□□□ -1.48
SMAD4-206ENST00000588860 C3orf84H3BNL1 204 aa5.8□□□□□ -1.48
SMAD4-206ENST00000588860 LINC01620Q4KN68 170 aa5.8□□□□□ -1.48
SMAD4-206ENST00000588860 OCIAD2Q56VL3 154 aa5.8□□□□□ -1.48
SMAD4-206ENST00000588860 LCE5AQ5TCM9 118 aa5.8□□□□□ -1.48
SMAD4-206ENST00000588860 Q6ZRU5 148 aa5.8□□□□□ -1.48
SMAD4-206ENST00000588860 F8WDY8 70 aa5.79□□□□□ -1.48
SMAD4-206ENST00000588860 LST1O00453 97 aa5.79□□□□□ -1.48
SMAD4-206ENST00000588860 NCR3O14931 201 aa5.79□□□□□ -1.48
SMAD4-206ENST00000588860 NDUFC2O95298 119 aa5.79□□□□□ -1.48
SMAD4-206ENST00000588860 RPL28P46779 137 aaKnown RBP5.79□□□□□ -1.48
SMAD4-206ENST00000588860 PRR3P79522 188 aaKnown RBP5.79□□□□□ -1.48
SMAD4-206ENST00000588860 CASC10Q5T4H9 136 aa5.79□□□□□ -1.48
SMAD4-206ENST00000588860 SMIM11BQ8TCY0 68 aa5.79□□□□□ -1.48
SMAD4-206ENST00000588860 USP17L23D6RBM5 183 aa5.78□□□□□ -1.48
SMAD4-206ENST00000588860 K7ERU9 68 aa5.78□□□□□ -1.48
SMAD4-206ENST00000588860 SLC25A20O43772 301 aa5.78□□□□□ -1.48
SMAD4-206ENST00000588860 SYCNQ0VAF6 134 aa5.78□□□□□ -1.48
SMAD4-206ENST00000588860 ETDBQ3ZM63 59 aa5.78□□□□□ -1.48
SMAD4-206ENST00000588860 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.78□□□□□ -1.48
SMAD4-206ENST00000588860 HERC2O95714 4834 aa5.78□□□□□ -1.48
SMAD4-206ENST00000588860 TRBV10-2A0A0K0K1G8 114 aa5.77□□□□□ -1.49
SMAD4-206ENST00000588860 LCE6AA0A183 80 aa5.77□□□□□ -1.49
SMAD4-206ENST00000588860 RNF151Q2KHN1 245 aa5.77□□□□□ -1.49
SMAD4-206ENST00000588860 Q8NDZ9 215 aa5.77□□□□□ -1.49
SMAD4-206ENST00000588860 CARD19Q96LW7 228 aa5.77□□□□□ -1.49
SMAD4-206ENST00000588860 NDUFC2-KCTD14E9PQ53 114 aa5.76□□□□□ -1.49
SMAD4-206ENST00000588860 H3BS24 57 aa5.76□□□□□ -1.49
SMAD4-206ENST00000588860 M0QXV9 152 aa5.76□□□□□ -1.49
SMAD4-206ENST00000588860 ANKRD29Q8N6D5 301 aa5.76□□□□□ -1.49
SMAD4-206ENST00000588860 KRTAP1-5Q9BYS1 174 aa5.76□□□□□ -1.49
SMAD4-206ENST00000588860 XAGE1AQ9HD64 81 aa5.76□□□□□ -1.49
SMAD4-206ENST00000588860 LECT2O14960 151 aa5.75□□□□□ -1.49
SMAD4-206ENST00000588860 GAGE2EQ4V326 116 aa5.75□□□□□ -1.49
SMAD4-206ENST00000588860 S100A7L2Q5SY68 101 aa5.75□□□□□ -1.49
SMAD4-206ENST00000588860 FAM218AQ96MZ4 157 aa5.75□□□□□ -1.49
SMAD4-206ENST00000588860 GAGE2DQ9UEU5 116 aa5.75□□□□□ -1.49
SMAD4-206ENST00000588860 H3BT86 120 aa5.74□□□□□ -1.49
SMAD4-206ENST00000588860 TRACP01848 142 aa5.74□□□□□ -1.49
SMAD4-206ENST00000588860 RPL18AQ02543 176 aaKnown RBP5.74□□□□□ -1.49
SMAD4-206ENST00000588860 TEN1Q86WV5 123 aa5.74□□□□□ -1.49
SMAD4-206ENST00000588860 TMEM126AQ9H061 195 aa5.74□□□□□ -1.49
SMAD4-206ENST00000588860 H0YGX0 51 aa5.73□□□□□ -1.49
SMAD4-206ENST00000588860 PSCAO43653 123 aa5.73□□□□□ -1.49
SMAD4-206ENST00000588860 PPDPFLQ8WWR9 84 aa5.73□□□□□ -1.49
SMAD4-206ENST00000588860 A0A087WYN8 130 aa5.72□□□□□ -1.49
SMAD4-206ENST00000588860 J3QR89 54 aa5.72□□□□□ -1.49
SMAD4-206ENST00000588860 SLPIP03973 132 aa5.72□□□□□ -1.49
SMAD4-206ENST00000588860 VPREB1P12018 145 aa5.72□□□□□ -1.49
SMAD4-206ENST00000588860 TTC32Q5I0X7 151 aa5.72□□□□□ -1.49
SMAD4-206ENST00000588860 Q6ZRP5 223 aa5.72□□□□□ -1.49
SMAD4-206ENST00000588860 LINC01600Q96MT4 127 aa5.72□□□□□ -1.49
SMAD4-206ENST00000588860 CSMD3Q7Z407 3707 aa5.72□□□□□ -1.49
SMAD4-206ENST00000588860 DNAH7Q8WXX0 4024 aa5.71□□□□□ -1.49
SMAD4-206ENST00000588860 NBDYA0A0U1RRE5 68 aa5.71□□□□□ -1.5
SMAD4-206ENST00000588860 DNAL4O96015 105 aa5.71□□□□□ -1.5
SMAD4-206ENST00000588860 IGLV6-57P01721 117 aa5.71□□□□□ -1.5
SMAD4-206ENST00000588860 LYSTQ99698 3801 aa5.71□□□□□ -1.5
SMAD4-206ENST00000588860 VPS25Q9BRG1 176 aa5.71□□□□□ -1.5
SMAD4-206ENST00000588860 TRAV23DV6A0A075B6W5 121 aa5.7□□□□□ -1.5
SMAD4-206ENST00000588860 TRBV10-3A0A0K0K1G6 114 aa5.7□□□□□ -1.5
SMAD4-206ENST00000588860 M0R378 163 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 323 ms