RNA–Protein interactions for RNA: ENST00000588780.5

CAPNS1-205, Transcript of calpain small subunit 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CAPNS1, Length 1,035 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-205ENST00000588780 Q8N377 158 aa12.02□□□□□ -0.49
CAPNS1-205ENST00000588780 ERG28Q9UKR5 140 aa12.02□□□□□ -0.49
CAPNS1-205ENST00000588780 IGLV8-61A0A075B6I0 122 aa12.01□□□□□ -0.49
CAPNS1-205ENST00000588780 IGLV9-49A0A0B4J1Y8 123 aa12□□□□□ -0.49
CAPNS1-205ENST00000588780 MOBPQ13875 183 aa12□□□□□ -0.49
CAPNS1-205ENST00000588780 MRPL18Q9H0U6 180 aaKnown RBP12□□□□□ -0.49
CAPNS1-205ENST00000588780 PCOTHQ58A44 107 aa11.99□□□□□ -0.49
CAPNS1-205ENST00000588780 Q8NDZ9 215 aa11.99□□□□□ -0.49
CAPNS1-205ENST00000588780 SMCR5Q8TEV8 140 aa11.99□□□□□ -0.49
CAPNS1-205ENST00000588780 ZNF625Q96I27 306 aaPredicted RBP11.99□□□□□ -0.49
CAPNS1-205ENST00000588780 ADCYAP1P18509 176 aa11.98□□□□□ -0.49
CAPNS1-205ENST00000588780 PEA15Q15121 130 aa11.98□□□□□ -0.49
CAPNS1-205ENST00000588780 GAGE2AQ6NT46 116 aa11.97□□□□□ -0.49
CAPNS1-205ENST00000588780 CST9LQ9H4G1 147 aa11.97□□□□□ -0.49
CAPNS1-205ENST00000588780 RPS29P62273 56 aaKnown RBP11.96□□□□□ -0.49
CAPNS1-205ENST00000588780 COX17Q14061 63 aa11.96□□□□□ -0.49
CAPNS1-205ENST00000588780 ETDCA0A1B0GVM5 59 aa11.93□□□□□ -0.5
CAPNS1-205ENST00000588780 KRTAP9-1A8MXZ3 250 aaPredicted RBP11.92□□□□□ -0.5
CAPNS1-205ENST00000588780 PMVKQ15126 192 aa11.92□□□□□ -0.5
CAPNS1-205ENST00000588780 SSBP3-AS1Q7Z2R9 100 aa11.92□□□□□ -0.5
CAPNS1-205ENST00000588780 PRYO14603 147 aa11.91□□□□□ -0.5
CAPNS1-205ENST00000588780 LINC00483Q53H64 154 aa11.9□□□□□ -0.5
CAPNS1-205ENST00000588780 LINC00158P58513 81 aa11.89□□□□□ -0.51
CAPNS1-205ENST00000588780 IGLV5-39A0A0G2JS06 123 aa11.88□□□□□ -0.51
CAPNS1-205ENST00000588780 COX6B2Q6YFQ2 88 aa11.88□□□□□ -0.51
CAPNS1-205ENST00000588780 LINC01549A6NIU2 74 aa11.87□□□□□ -0.51
CAPNS1-205ENST00000588780 NDUFA6P56556 154 aa11.87□□□□□ -0.51
CAPNS1-205ENST00000588780 A0A0U1RRA0 63 aa11.86□□□□□ -0.51
CAPNS1-205ENST00000588780 KIAA1644Q3SXP7 199 aa11.86□□□□□ -0.51
CAPNS1-205ENST00000588780 C9orf92A6NGG3 77 aa11.85□□□□□ -0.51
CAPNS1-205ENST00000588780 C9orf153Q5TBE3 101 aa11.85□□□□□ -0.51
CAPNS1-205ENST00000588780 NCR3O14931 201 aa11.84□□□□□ -0.51
CAPNS1-205ENST00000588780 ATP6V1G1O75348 118 aa11.83□□□□□ -0.52
CAPNS1-205ENST00000588780 MT-ND4LP03901 98 aa11.82□□□□□ -0.52
CAPNS1-205ENST00000588780 IGLC3P0DOY3 106 aa11.82□□□□□ -0.52
CAPNS1-205ENST00000588780 SFTA2Q6UW10 78 aa11.82□□□□□ -0.52
CAPNS1-205ENST00000588780 ZNF22P17026 224 aaPredicted RBP11.81□□□□□ -0.52
CAPNS1-205ENST00000588780 SPRR1AP35321 89 aa11.81□□□□□ -0.52
CAPNS1-205ENST00000588780 S100A12P80511 92 aa11.81□□□□□ -0.52
CAPNS1-205ENST00000588780 BOD1L2Q8IYS8 172 aa11.81□□□□□ -0.52
CAPNS1-205ENST00000588780 KCNQ1DNQ9H478 68 aa11.81□□□□□ -0.52
CAPNS1-205ENST00000588780 ANAPC16Q96DE5 110 aa11.8□□□□□ -0.52
CAPNS1-205ENST00000588780 ERC2-IT1O76042 136 aa11.78□□□□□ -0.52
CAPNS1-205ENST00000588780 KRTAP4-16G5E9R7 235 aaPredicted RBP11.77□□□□□ -0.53
CAPNS1-205ENST00000588780 SMCO4Q9NRQ5 59 aa11.77□□□□□ -0.53
CAPNS1-205ENST00000588780 hCG_2014768A0A024R1R8 64 aa11.76□□□□□ -0.53
CAPNS1-205ENST00000588780 TMEM170BQ5T4T1 132 aa11.76□□□□□ -0.53
CAPNS1-205ENST00000588780 FA2HQ7L5A8 372 aa11.76□□□□□ -0.53
CAPNS1-205ENST00000588780 TRBV10-3A0A0K0K1G6 114 aa11.75□□□□□ -0.53
CAPNS1-205ENST00000588780 TRAV9-1A0A075B6T8 112 aa11.74□□□□□ -0.53
CAPNS1-205ENST00000588780 B5MCH6 92 aa11.74□□□□□ -0.53
CAPNS1-205ENST00000588780 LINC01546A6NGU7 62 aa11.71□□□□□ -0.53
CAPNS1-205ENST00000588780 SMIM13P0DJ93 91 aa11.71□□□□□ -0.53
CAPNS1-205ENST00000588780 MEIG1Q5JSS6 88 aa11.71□□□□□ -0.53
CAPNS1-205ENST00000588780 HRCT1Q6UXD1 115 aa11.71□□□□□ -0.53
CAPNS1-205ENST00000588780 LIMD2Q9BT23 127 aa11.71□□□□□ -0.53
CAPNS1-205ENST00000588780 IGLV6-57P01721 117 aa11.69□□□□□ -0.54
CAPNS1-205ENST00000588780 C11orf86A6NJI1 115 aa11.68□□□□□ -0.54
CAPNS1-205ENST00000588780 MIR7-3HGQ8N6C7 128 aa11.68□□□□□ -0.54
CAPNS1-205ENST00000588780 Q9BRP9 147 aa11.68□□□□□ -0.54
CAPNS1-205ENST00000588780 Q6ZRX8 168 aa11.65□□□□□ -0.54
CAPNS1-205ENST00000588780 BAGE3Q86Y29 109 aa11.65□□□□□ -0.54
CAPNS1-205ENST00000588780 DDTP30046 118 aa11.64□□□□□ -0.55
CAPNS1-205ENST00000588780 JOSD1Q15040 202 aaPredicted RBP11.6□□□□□ -0.55
CAPNS1-205ENST00000588780 Q6Q795 121 aa11.59□□□□□ -0.55
CAPNS1-205ENST00000588780 FLGP20930 4061 aaPredicted RBP11.59□□□□□ -0.55
CAPNS1-205ENST00000588780 ST20-AS1Q8NBB2 130 aa11.58□□□□□ -0.56
CAPNS1-205ENST00000588780 LINC00587B1AMM8 73 aa11.57□□□□□ -0.56
CAPNS1-205ENST00000588780 MAP1LC3CQ9BXW4 147 aa11.57□□□□□ -0.56
CAPNS1-205ENST00000588780 CHTOPQ9Y3Y2 248 aaKnown RBP11.57□□□□□ -0.56
CAPNS1-205ENST00000588780 A0A096LNJ9 63 aa11.56□□□□□ -0.56
CAPNS1-205ENST00000588780 HBDP02042 147 aa11.56□□□□□ -0.56
CAPNS1-205ENST00000588780 HERV-K104P63124 156 aa11.56□□□□□ -0.56
CAPNS1-205ENST00000588780 FABP9Q0Z7S8 132 aa11.56□□□□□ -0.56
CAPNS1-205ENST00000588780 PMCHL1Q16048 86 aa11.56□□□□□ -0.56
CAPNS1-205ENST00000588780 S100A7L2Q5SY68 101 aa11.56□□□□□ -0.56
CAPNS1-205ENST00000588780 TMEM223A0PJW6 202 aa11.55□□□□□ -0.56
CAPNS1-205ENST00000588780 RPL37P61927 97 aaKnown RBP11.55□□□□□ -0.56
CAPNS1-205ENST00000588780 SSPOA2VEC9 5147 aa11.54□□□□□ -0.56
CAPNS1-205ENST00000588780 TRBV10-2A0A0K0K1G8 114 aa11.52□□□□□ -0.57
CAPNS1-205ENST00000588780 CFC1P0CG37 223 aa11.51□□□□□ -0.57
CAPNS1-205ENST00000588780 S100PP25815 95 aa11.51□□□□□ -0.57
CAPNS1-205ENST00000588780 SLC25A34Q6PIV7 304 aa11.51□□□□□ -0.57
CAPNS1-205ENST00000588780 USH2AO75445 5202 aa11.51□□□□□ -0.57
CAPNS1-205ENST00000588780 TRAV23DV6A0A075B6W5 121 aa11.5□□□□□ -0.57
CAPNS1-205ENST00000588780 MYMXA0A1B0GTQ4 84 aa11.49□□□□□ -0.57
CAPNS1-205ENST00000588780 H7C2G1 150 aa11.49□□□□□ -0.57
CAPNS1-205ENST00000588780 LINC00614P0C842 121 aa11.49□□□□□ -0.57
CAPNS1-205ENST00000588780 MIEN1Q9BRT3 115 aa11.49□□□□□ -0.57
CAPNS1-205ENST00000588780 SPANXB1Q9NS25 103 aaPredicted RBP11.49□□□□□ -0.57
CAPNS1-205ENST00000588780 LAMTOR3Q9UHA4 124 aa11.48□□□□□ -0.57
CAPNS1-205ENST00000588780 COX19Q49B96 90 aa11.47□□□□□ -0.57
CAPNS1-205ENST00000588780 SEC11CQ9BY50 192 aa11.47□□□□□ -0.57
CAPNS1-205ENST00000588780 ZNF73O43830 326 aaPredicted RBP11.46□□□□□ -0.57
CAPNS1-205ENST00000588780 HINT1P49773 126 aaPredicted RBP11.46□□□□□ -0.57
CAPNS1-205ENST00000588780 C5orf52A6NGY3 159 aa11.45□□□□□ -0.58
CAPNS1-205ENST00000588780 URB1-AS1Q96HZ7 61 aa11.44□□□□□ -0.58
CAPNS1-205ENST00000588780 COMMD7Q86VX2 200 aa11.43□□□□□ -0.58
CAPNS1-205ENST00000588780 C18orf32Q8TCD1 76 aa11.41□□□□□ -0.58
CAPNS1-205ENST00000588780 FCGBPQ9Y6R7 5405 aaPredicted RBP11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms