RNA–Protein interactions for RNA: ENST00000588516.5

NEDD4L-223, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 5

Gene NEDD4L, Length 1,304 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-223ENST00000588516 A0A087WYN8 130 aa9.63□□□□□ -0.87
NEDD4L-223ENST00000588516 TMEM256-PLSCR3K7ERE1 68 aa9.63□□□□□ -0.87
NEDD4L-223ENST00000588516 WFDC9Q8NEX5 89 aa9.63□□□□□ -0.87
NEDD4L-223ENST00000588516 NHLRC4P0CG21 123 aaPredicted RBP9.62□□□□□ -0.87
NEDD4L-223ENST00000588516 SVIPQ8NHG7 77 aa9.62□□□□□ -0.87
NEDD4L-223ENST00000588516 C11orf68Q9H3H3 251 aaKnown RBP9.62□□□□□ -0.87
NEDD4L-223ENST00000588516 H3BNG1 76 aa9.61□□□□□ -0.87
NEDD4L-223ENST00000588516 Q8NAQ8 132 aa9.61□□□□□ -0.87
NEDD4L-223ENST00000588516 C22orf24Q9Y442 160 aa9.61□□□□□ -0.87
NEDD4L-223ENST00000588516 A0A096LPF7 62 aa9.6□□□□□ -0.87
NEDD4L-223ENST00000588516 GVQW2A0A096LPI5 108 aaPredicted RBP9.59□□□□□ -0.87
NEDD4L-223ENST00000588516 A0A0J9YWU9 116 aa9.59□□□□□ -0.87
NEDD4L-223ENST00000588516 IGHV4-30-4P0DP06 118 aa9.59□□□□□ -0.87
NEDD4L-223ENST00000588516 CLPSL2Q6UWE3 100 aa9.59□□□□□ -0.87
NEDD4L-223ENST00000588516 Q8N814 137 aa9.59□□□□□ -0.87
NEDD4L-223ENST00000588516 LCE2BO14633 110 aa9.58□□□□□ -0.88
NEDD4L-223ENST00000588516 SPAG11BQ08648 103 aa9.58□□□□□ -0.88
NEDD4L-223ENST00000588516 Q6JHZ5 121 aa9.58□□□□□ -0.88
NEDD4L-223ENST00000588516 PRR34Q9NV39 138 aa9.58□□□□□ -0.88
NEDD4L-223ENST00000588516 F8WDY8 70 aa9.57□□□□□ -0.88
NEDD4L-223ENST00000588516 ATP5EP2Q5VTU8 51 aa9.57□□□□□ -0.88
NEDD4L-223ENST00000588516 K7EIL1 84 aa9.56□□□□□ -0.88
NEDD4L-223ENST00000588516 CCKP06307 115 aa9.56□□□□□ -0.88
NEDD4L-223ENST00000588516 FAM236AA0A1B0GUQ0 79 aa9.56□□□□□ -0.88
NEDD4L-223ENST00000588516 FAM236BA0A1B0GV22 79 aa9.56□□□□□ -0.88
NEDD4L-223ENST00000588516 B5MCH6 92 aa9.56□□□□□ -0.88
NEDD4L-223ENST00000588516 ATOX1O00244 68 aa9.56□□□□□ -0.88
NEDD4L-223ENST00000588516 RYR2Q92736 4967 aa9.55□□□□□ -0.88
NEDD4L-223ENST00000588516 PDE6GP18545 87 aa9.55□□□□□ -0.88
NEDD4L-223ENST00000588516 SMCR5Q8TEV8 140 aa9.55□□□□□ -0.88
NEDD4L-223ENST00000588516 C14orf132Q9NPU4 83 aa9.55□□□□□ -0.88
NEDD4L-223ENST00000588516 IGLV10-54A0A075B6I4 117 aa9.54□□□□□ -0.88
NEDD4L-223ENST00000588516 C3orf84H3BNL1 204 aa9.54□□□□□ -0.88
NEDD4L-223ENST00000588516 HTN3P15516 51 aa9.54□□□□□ -0.88
NEDD4L-223ENST00000588516 COL7A1Q02388 2944 aa9.53□□□□□ -0.88
NEDD4L-223ENST00000588516 UQCRQO14949 82 aa9.53□□□□□ -0.88
NEDD4L-223ENST00000588516 DEFB4AO15263 64 aa9.53□□□□□ -0.88
NEDD4L-223ENST00000588516 NANOS2P60321 138 aaKnown RBP9.53□□□□□ -0.88
NEDD4L-223ENST00000588516 CELA1Q9UNI1 258 aa9.53□□□□□ -0.88
NEDD4L-223ENST00000588516 TENM2Q9NT68 2774 aa9.52□□□□□ -0.88
NEDD4L-223ENST00000588516 TRBV7-6A0A0J9YX20 115 aa9.52□□□□□ -0.89
NEDD4L-223ENST00000588516 CCDC179H3BU77 68 aa9.52□□□□□ -0.89
NEDD4L-223ENST00000588516 LYPD5Q6UWN5 251 aa9.52□□□□□ -0.89
NEDD4L-223ENST00000588516 LINC00575Q6W349 94 aa9.52□□□□□ -0.89
NEDD4L-223ENST00000588516 KLK12Q9UKR0 248 aa9.52□□□□□ -0.89
NEDD4L-223ENST00000588516 DNAH9Q9NYC9 4486 aa9.52□□□□□ -0.89
NEDD4L-223ENST00000588516 hADV29S1A0JD25 119 aa9.51□□□□□ -0.89
NEDD4L-223ENST00000588516 NCR3O14931 201 aa9.51□□□□□ -0.89
NEDD4L-223ENST00000588516 ZNF561-AS1K7EIQ3 104 aa9.5□□□□□ -0.89
NEDD4L-223ENST00000588516 IGLV6-57P01721 117 aa9.5□□□□□ -0.89
NEDD4L-223ENST00000588516 C6orf99Q4VX62 202 aa9.5□□□□□ -0.89
NEDD4L-223ENST00000588516 UNQ6190/PRO20217Q6UXQ8 127 aa9.5□□□□□ -0.89
NEDD4L-223ENST00000588516 C3orf22Q8N5N4 141 aa9.5□□□□□ -0.89
NEDD4L-223ENST00000588516 B9D2Q9BPU9 175 aa9.5□□□□□ -0.89
NEDD4L-223ENST00000588516 DNAH3Q8TD57 4116 aa9.49□□□□□ -0.89
NEDD4L-223ENST00000588516 SLPIP03973 132 aa9.49□□□□□ -0.89
NEDD4L-223ENST00000588516 TRBV10-3A0A0K0K1G6 114 aa9.48□□□□□ -0.89
NEDD4L-223ENST00000588516 ENHOQ6UWT2 76 aa9.48□□□□□ -0.89
NEDD4L-223ENST00000588516 C2orf48Q96LS8 159 aa9.48□□□□□ -0.89
NEDD4L-223ENST00000588516 UBL5Q9BZL1 73 aa9.48□□□□□ -0.89
NEDD4L-223ENST00000588516 LOC110117498A0A087WWA1 95 aa9.47□□□□□ -0.89
NEDD4L-223ENST00000588516 HIST1H4AP62805 103 aaKnown RBP9.47□□□□□ -0.89
NEDD4L-223ENST00000588516 RBM3P98179 157 aaKnown RBP9.47□□□□□ -0.89
NEDD4L-223ENST00000588516 EGFEM1PQ0D2K5 195 aa9.47□□□□□ -0.89
NEDD4L-223ENST00000588516 DIRC1Q969H9 104 aa9.47□□□□□ -0.89
NEDD4L-223ENST00000588516 LINC00526Q96FQ7 95 aa9.47□□□□□ -0.89
NEDD4L-223ENST00000588516 LINC00846Q9NV44 126 aa9.47□□□□□ -0.89
NEDD4L-223ENST00000588516 COX7CP15954 63 aa9.46□□□□□ -0.9
NEDD4L-223ENST00000588516 PRR3P79522 188 aaKnown RBP9.46□□□□□ -0.9
NEDD4L-223ENST00000588516 RPL18AQ02543 176 aaKnown RBP9.46□□□□□ -0.9
NEDD4L-223ENST00000588516 C9orf116Q5BN46 136 aaPredicted RBP9.46□□□□□ -0.9
NEDD4L-223ENST00000588516 DYNC2H1Q8NCM8 4307 aaKnown RBP9.46□□□□□ -0.9
NEDD4L-223ENST00000588516 SACSQ9NZJ4 4579 aa9.45□□□□□ -0.9
NEDD4L-223ENST00000588516 CASC10Q5T4H9 136 aa9.45□□□□□ -0.9
NEDD4L-223ENST00000588516 C9orf153Q5TBE3 101 aa9.45□□□□□ -0.9
NEDD4L-223ENST00000588516 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.45□□□□□ -0.9
NEDD4L-223ENST00000588516 SS18L2Q9UHA2 77 aa9.45□□□□□ -0.9
NEDD4L-223ENST00000588516 TRAV23DV6A0A075B6W5 121 aa9.44□□□□□ -0.9
NEDD4L-223ENST00000588516 KRTAP10-11P60412 298 aa9.44□□□□□ -0.9
NEDD4L-223ENST00000588516 C6orf223Q8N319 242 aa9.44□□□□□ -0.9
NEDD4L-223ENST00000588516 CAMK2N2Q96S95 79 aa9.44□□□□□ -0.9
NEDD4L-223ENST00000588516 LCE6AA0A183 80 aa9.43□□□□□ -0.9
NEDD4L-223ENST00000588516 M0R378 163 aa9.43□□□□□ -0.9
NEDD4L-223ENST00000588516 C10orf25Q5T742 122 aa9.43□□□□□ -0.9
NEDD4L-223ENST00000588516 DSCR8Q96T75 97 aa9.43□□□□□ -0.9
NEDD4L-223ENST00000588516 LAMTOR3Q9UHA4 124 aa9.43□□□□□ -0.9
NEDD4L-223ENST00000588516 BCE1O60756 84 aa9.42□□□□□ -0.9
NEDD4L-223ENST00000588516 COX7BP24311 80 aa9.42□□□□□ -0.9
NEDD4L-223ENST00000588516 C9orf129Q5T035 196 aaKnown RBP9.42□□□□□ -0.9
NEDD4L-223ENST00000588516 Q8N3U1 123 aa9.42□□□□□ -0.9
NEDD4L-223ENST00000588516 C6orf48Q9UBA6 75 aa9.42□□□□□ -0.9
NEDD4L-223ENST00000588516 IGKV3D-7A0A0C4DH55 119 aa9.4□□□□□ -0.9
NEDD4L-223ENST00000588516 C1orf43Q9BWL3 253 aa9.4□□□□□ -0.9
NEDD4L-223ENST00000588516 ZNF73O43830 326 aaPredicted RBP9.39□□□□□ -0.91
NEDD4L-223ENST00000588516 CRYGAP11844 174 aa9.39□□□□□ -0.91
NEDD4L-223ENST00000588516 LINC01556Q5JQF7 62 aa9.39□□□□□ -0.91
NEDD4L-223ENST00000588516 SERP2Q8N6R1 65 aa9.39□□□□□ -0.91
NEDD4L-223ENST00000588516 NDUFC2-KCTD14E9PQ53 114 aa9.38□□□□□ -0.91
NEDD4L-223ENST00000588516 Q6ZQT0 140 aa9.38□□□□□ -0.91
NEDD4L-223ENST00000588516 SMIM20Q8N5G0 67 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms