RNA–Protein interactions for RNA: ENST00000585932.5

PTBP1-207, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 3

Gene PTBP1, Length 1,030 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-207ENST00000585932 TMEM238C9JI98 176 aa12.37□□□□□ -0.43
PTBP1-207ENST00000585932 LEPROTL1O95214 131 aa12.37□□□□□ -0.43
PTBP1-207ENST00000585932 RPL28P46779 137 aaKnown RBP12.37□□□□□ -0.43
PTBP1-207ENST00000585932 TSPEAR-AS2P59090 65 aa12.37□□□□□ -0.43
PTBP1-207ENST00000585932 SFTA2Q6UW10 78 aa12.37□□□□□ -0.43
PTBP1-207ENST00000585932 A0A087X002 238 aa12.36□□□□□ -0.43
PTBP1-207ENST00000585932 RNF213Q63HN8 5207 aa12.36□□□□□ -0.43
PTBP1-207ENST00000585932 SMIM13P0DJ93 91 aa12.35□□□□□ -0.43
PTBP1-207ENST00000585932 LINC00158P58513 81 aa12.35□□□□□ -0.43
PTBP1-207ENST00000585932 FABP4P15090 132 aa12.34□□□□□ -0.43
PTBP1-207ENST00000585932 ANAPC11Q9NYG5 84 aa12.34□□□□□ -0.43
PTBP1-207ENST00000585932 M0R378 163 aa12.33□□□□□ -0.44
PTBP1-207ENST00000585932 PMCHL2Q9BQD1 86 aa12.33□□□□□ -0.44
PTBP1-207ENST00000585932 TMEM126AQ9H061 195 aa12.33□□□□□ -0.44
PTBP1-207ENST00000585932 RPL24P83731 157 aaKnown RBP12.32□□□□□ -0.44
PTBP1-207ENST00000585932 RPL13AP40429 203 aaKnown RBP12.31□□□□□ -0.44
PTBP1-207ENST00000585932 UBE2AP49459 152 aa12.31□□□□□ -0.44
PTBP1-207ENST00000585932 PRLHP81277 87 aa12.31□□□□□ -0.44
PTBP1-207ENST00000585932 NDUFA12Q9UI09 145 aa12.31□□□□□ -0.44
PTBP1-207ENST00000585932 MIR7-3HGQ8N6C7 128 aa12.29□□□□□ -0.44
PTBP1-207ENST00000585932 HSPB8Q9UJY1 196 aa12.28□□□□□ -0.44
PTBP1-207ENST00000585932 LEPROTO15243 131 aa12.27□□□□□ -0.45
PTBP1-207ENST00000585932 KRTAP13-2Q52LG2 175 aa12.27□□□□□ -0.45
PTBP1-207ENST00000585932 MEIG1Q5JSS6 88 aa12.27□□□□□ -0.45
PTBP1-207ENST00000585932 HIST1H2BKO60814 126 aa12.26□□□□□ -0.45
PTBP1-207ENST00000585932 HIST1H2BJP06899 126 aa12.26□□□□□ -0.45
PTBP1-207ENST00000585932 HIST1H2BOP23527 126 aa12.26□□□□□ -0.45
PTBP1-207ENST00000585932 PLNP26678 52 aa12.26□□□□□ -0.45
PTBP1-207ENST00000585932 HIST1H2BBP33778 126 aa12.26□□□□□ -0.45
PTBP1-207ENST00000585932 HIST1H2BDP58876 126 aa12.26□□□□□ -0.45
PTBP1-207ENST00000585932 HIST1H2BCP62807 126 aa12.26□□□□□ -0.45
PTBP1-207ENST00000585932 HERV-K104P63124 156 aa12.26□□□□□ -0.45
PTBP1-207ENST00000585932 HIST2H2BEQ16778 126 aa12.26□□□□□ -0.45
PTBP1-207ENST00000585932 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.26□□□□□ -0.45
PTBP1-207ENST00000585932 FAM19A1Q7Z5A9 133 aa12.26□□□□□ -0.45
PTBP1-207ENST00000585932 HIST1H2BHQ93079 126 aa12.26□□□□□ -0.45
PTBP1-207ENST00000585932 HIST1H2BNQ99877 126 aa12.26□□□□□ -0.45
PTBP1-207ENST00000585932 HIST1H2BMQ99879 126 aa12.26□□□□□ -0.45
PTBP1-207ENST00000585932 DPM2O94777 84 aa12.25□□□□□ -0.45
PTBP1-207ENST00000585932 BOD1L2Q8IYS8 172 aa12.25□□□□□ -0.45
PTBP1-207ENST00000585932 MYMXA0A1B0GTQ4 84 aa12.24□□□□□ -0.45
PTBP1-207ENST00000585932 DAND5Q8N907 189 aa12.24□□□□□ -0.45
PTBP1-207ENST00000585932 J3QQQ9 107 aa12.23□□□□□ -0.45
PTBP1-207ENST00000585932 NCR3O14931 201 aa12.23□□□□□ -0.45
PTBP1-207ENST00000585932 IGKCP01834 107 aa12.23□□□□□ -0.45
PTBP1-207ENST00000585932 CRYGAP11844 174 aa12.23□□□□□ -0.45
PTBP1-207ENST00000585932 PLEKHB2Q96CS7 222 aa12.22□□□□□ -0.45
PTBP1-207ENST00000585932 ATP6V1G1O75348 118 aa12.2□□□□□ -0.46
PTBP1-207ENST00000585932 TYMSOSQ8TAI1 123 aa12.2□□□□□ -0.46
PTBP1-207ENST00000585932 TSPAN13O95857 204 aa12.19□□□□□ -0.46
PTBP1-207ENST00000585932 MAP1LC3CQ9BXW4 147 aa12.19□□□□□ -0.46
PTBP1-207ENST00000585932 LOC107984156A0A0G2JMH3 177 aa12.18□□□□□ -0.46
PTBP1-207ENST00000585932 FAM229BQ4G0N7 80 aa12.18□□□□□ -0.46
PTBP1-207ENST00000585932 ARL17AQ8IVW1 177 aa12.18□□□□□ -0.46
PTBP1-207ENST00000585932 TRBV10-3A0A0K0K1G6 114 aa12.17□□□□□ -0.46
PTBP1-207ENST00000585932 KRTAP4-16G5E9R7 235 aaPredicted RBP12.17□□□□□ -0.46
PTBP1-207ENST00000585932 SYS1-DBNDD2H3BUS1 97 aa12.17□□□□□ -0.46
PTBP1-207ENST00000585932 SPRR1AP35321 89 aa12.17□□□□□ -0.46
PTBP1-207ENST00000585932 KCNQ1DNQ9H478 68 aa12.17□□□□□ -0.46
PTBP1-207ENST00000585932 LINC00587B1AMM8 73 aa12.16□□□□□ -0.46
PTBP1-207ENST00000585932 EIF4EBP3O60516 100 aaPredicted RBP12.16□□□□□ -0.46
PTBP1-207ENST00000585932 HERVK_113P61574 105 aa12.16□□□□□ -0.46
PTBP1-207ENST00000585932 IGKV2D-26A0A0A0MRZ7 120 aa12.15□□□□□ -0.46
PTBP1-207ENST00000585932 PRYO14603 147 aa12.15□□□□□ -0.46
PTBP1-207ENST00000585932 HIGD2AQ9BW72 106 aa12.15□□□□□ -0.46
PTBP1-207ENST00000585932 LGALS3P17931 250 aaKnown RBP12.14□□□□□ -0.47
PTBP1-207ENST00000585932 NMUP48645 174 aa12.14□□□□□ -0.47
PTBP1-207ENST00000585932 ADAMTSL4-AS1Q5T5F5 129 aa12.14□□□□□ -0.47
PTBP1-207ENST00000585932 SOSTDC1Q6X4U4 206 aa12.14□□□□□ -0.47
PTBP1-207ENST00000585932 E9PLD3 99 aa12.13□□□□□ -0.47
PTBP1-207ENST00000585932 PRR4Q16378 134 aa12.12□□□□□ -0.47
PTBP1-207ENST00000585932 LINC01545Q5VT33 79 aa12.12□□□□□ -0.47
PTBP1-207ENST00000585932 C3orf22Q8N5N4 141 aa12.12□□□□□ -0.47
PTBP1-207ENST00000585932 A0A0J9YXY3 114 aa12.11□□□□□ -0.47
PTBP1-207ENST00000585932 LINC00337Q8N6G1 96 aa12.11□□□□□ -0.47
PTBP1-207ENST00000585932 SPRR4Q96PI1 79 aa12.11□□□□□ -0.47
PTBP1-207ENST00000585932 COA6Q5JTJ3 125 aaKnown RBP12.1□□□□□ -0.47
PTBP1-207ENST00000585932 SMCR5Q8TEV8 140 aa12.09□□□□□ -0.47
PTBP1-207ENST00000585932 C3orf79P0CE67 100 aa12.08□□□□□ -0.48
PTBP1-207ENST00000585932 NPC2P61916 151 aa12.08□□□□□ -0.48
PTBP1-207ENST00000585932 LITAFQ99732 161 aa12.08□□□□□ -0.48
PTBP1-207ENST00000585932 TRBV10-2A0A0K0K1G8 114 aa12.07□□□□□ -0.48
PTBP1-207ENST00000585932 LINC00304Q8N9R0 145 aa12.07□□□□□ -0.48
PTBP1-207ENST00000585932 DDTP30046 118 aa12.06□□□□□ -0.48
PTBP1-207ENST00000585932 PET117Q6UWS5 81 aa12.06□□□□□ -0.48
PTBP1-207ENST00000585932 TTTY13Q9BZ97 58 aa12.06□□□□□ -0.48
PTBP1-207ENST00000585932 SPANXB1Q9NS25 103 aaPredicted RBP12.06□□□□□ -0.48
PTBP1-207ENST00000585932 ETDCA0A1B0GVM5 59 aa12.05□□□□□ -0.48
PTBP1-207ENST00000585932 B5MCH6 92 aa12.05□□□□□ -0.48
PTBP1-207ENST00000585932 ERC2-IT1O76042 136 aa12.04□□□□□ -0.48
PTBP1-207ENST00000585932 NDUFC2O95298 119 aa12.04□□□□□ -0.48
PTBP1-207ENST00000585932 IGLV6-57P01721 117 aa12.04□□□□□ -0.48
PTBP1-207ENST00000585932 RETNLBQ9BQ08 111 aa12.04□□□□□ -0.48
PTBP1-207ENST00000585932 Q9BRP9 147 aa12.02□□□□□ -0.49
PTBP1-207ENST00000585932 PPDPFQ9H3Y8 114 aa12.02□□□□□ -0.49
PTBP1-207ENST00000585932 MIEN1Q9BRT3 115 aa12.01□□□□□ -0.49
PTBP1-207ENST00000585932 KRTDAPP60985 99 aa12□□□□□ -0.49
PTBP1-207ENST00000585932 ZNF706Q9Y5V0 76 aaPredicted RBP11.99□□□□□ -0.49
PTBP1-207ENST00000585932 MUC2Q02817 5179 aa11.99□□□□□ -0.49
PTBP1-207ENST00000585932 LINC00483Q53H64 154 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms