RNA–Protein interactions for RNA: ENST00000585855.2

TCF3-206, Transcript of transcription factor 3, humanhuman

TSL 3

Gene TCF3, Length 1,170 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-206ENST00000585855 Q6ZVH6 145 aa12.6□□□□□ -0.39
TCF3-206ENST00000585855 FAM19A5Q7Z5A7 132 aaPredicted RBP12.6□□□□□ -0.39
TCF3-206ENST00000585855 PLA2G2DQ9UNK4 145 aa12.6□□□□□ -0.39
TCF3-206ENST00000585855 LRP1BQ9NZR2 4599 aa12.6□□□□□ -0.39
TCF3-206ENST00000585855 EPPK1P58107 5090 aaKnown RBP12.6□□□□□ -0.39
TCF3-206ENST00000585855 LOC107984156A0A0G2JMH3 177 aa12.59□□□□□ -0.39
TCF3-206ENST00000585855 HAMPP81172 84 aa12.59□□□□□ -0.39
TCF3-206ENST00000585855 ARL17AQ8IVW1 177 aa12.59□□□□□ -0.39
TCF3-206ENST00000585855 COPS9Q8WXC6 57 aa12.59□□□□□ -0.39
TCF3-206ENST00000585855 XGP55808 180 aa12.58□□□□□ -0.4
TCF3-206ENST00000585855 NPC2P61916 151 aa12.58□□□□□ -0.4
TCF3-206ENST00000585855 RPL24P83731 157 aaKnown RBP12.58□□□□□ -0.4
TCF3-206ENST00000585855 LINC00308Q8TCZ7 52 aa12.58□□□□□ -0.4
TCF3-206ENST00000585855 C12orf57Q99622 126 aa12.58□□□□□ -0.4
TCF3-206ENST00000585855 SPANXB1Q9NS25 103 aaPredicted RBP12.58□□□□□ -0.4
TCF3-206ENST00000585855 EPM2AB3EWF7 344 aa12.57□□□□□ -0.4
TCF3-206ENST00000585855 SRSF9Q13242 221 aaKnown RBP eCLIP12.57□□□□□ -0.4
TCF3-206ENST00000585855 SERTAD4-AS1Q5TG53 156 aa12.57□□□□□ -0.4
TCF3-206ENST00000585855 HIGD1BQ9P298 99 aa12.57□□□□□ -0.4
TCF3-206ENST00000585855 UQCR10Q9UDW1 63 aa12.57□□□□□ -0.4
TCF3-206ENST00000585855 IFITM1P13164 125 aa12.56□□□□□ -0.4
TCF3-206ENST00000585855 DNAH8Q96JB1 4490 aa12.56□□□□□ -0.4
TCF3-206ENST00000585855 IGLV5-37A0A075B6J1 123 aa12.55□□□□□ -0.4
TCF3-206ENST00000585855 M0QXV9 152 aa12.55□□□□□ -0.4
TCF3-206ENST00000585855 SOSTDC1Q6X4U4 206 aa12.55□□□□□ -0.4
TCF3-206ENST00000585855 NKAPP1Q8N9T2 125 aa12.55□□□□□ -0.4
TCF3-206ENST00000585855 VPREB1P12018 145 aa12.54□□□□□ -0.4
TCF3-206ENST00000585855 C2orf91Q6ZV80 131 aa12.54□□□□□ -0.4
TCF3-206ENST00000585855 KRTAP7-1Q8IUC3 87 aa12.54□□□□□ -0.4
TCF3-206ENST00000585855 HIST1H4GQ99525 98 aa12.53□□□□□ -0.4
TCF3-206ENST00000585855 PPDPFQ9H3Y8 114 aa12.53□□□□□ -0.4
TCF3-206ENST00000585855 C22orf24Q9Y442 160 aa12.53□□□□□ -0.4
TCF3-206ENST00000585855 EIF4EBP3O60516 100 aaPredicted RBP12.52□□□□□ -0.41
TCF3-206ENST00000585855 LINC00518Q8N0U6 118 aa12.52□□□□□ -0.41
TCF3-206ENST00000585855 PRO1933Q9H354 126 aa12.52□□□□□ -0.41
TCF3-206ENST00000585855 NDUFC2O95298 119 aa12.51□□□□□ -0.41
TCF3-206ENST00000585855 LBHQ53QV2 105 aaPredicted RBP12.51□□□□□ -0.41
TCF3-206ENST00000585855 MUSTN1Q8IVN3 82 aa12.51□□□□□ -0.41
TCF3-206ENST00000585855 Q8NDZ9 215 aa12.51□□□□□ -0.41
TCF3-206ENST00000585855 PHF5AQ7RTV0 110 aaKnown RBP12.5□□□□□ -0.41
TCF3-206ENST00000585855 MRPL55Q7Z7F7 128 aaKnown RBP12.5□□□□□ -0.41
TCF3-206ENST00000585855 C7orf33Q8WU49 177 aa12.49□□□□□ -0.41
TCF3-206ENST00000585855 TSTD3H0UI37 97 aa12.48□□□□□ -0.41
TCF3-206ENST00000585855 TRBV10-2A0A0K0K1G8 114 aa12.47□□□□□ -0.41
TCF3-206ENST00000585855 M0R378 163 aa12.47□□□□□ -0.41
TCF3-206ENST00000585855 NCR3O14931 201 aa12.47□□□□□ -0.41
TCF3-206ENST00000585855 HNRNPA3P51991 378 aaKnown RBP12.47□□□□□ -0.41
TCF3-206ENST00000585855 PRR3P79522 188 aaKnown RBP12.47□□□□□ -0.41
TCF3-206ENST00000585855 TAL2Q16559 108 aa12.47□□□□□ -0.41
TCF3-206ENST00000585855 GAGE10A6NGK3 116 aa12.46□□□□□ -0.41
TCF3-206ENST00000585855 UBE2BP63146 152 aa12.46□□□□□ -0.41
TCF3-206ENST00000585855 APOBP04114 4563 aaKnown RBP12.45□□□□□ -0.42
TCF3-206ENST00000585855 LINC00167Q96N53 147 aa12.45□□□□□ -0.42
TCF3-206ENST00000585855 SMR3BP02814 79 aaPredicted RBP12.44□□□□□ -0.42
TCF3-206ENST00000585855 LINC00528Q8N1L1 170 aa12.44□□□□□ -0.42
TCF3-206ENST00000585855 HSD52Q0P140 79 aa12.43□□□□□ -0.42
TCF3-206ENST00000585855 BIRC6Q9NR09 4857 aa12.42□□□□□ -0.42
TCF3-206ENST00000585855 A4D1N5 150 aa12.41□□□□□ -0.42
TCF3-206ENST00000585855 RPL37AP8A6NKH3 93 aa12.41□□□□□ -0.42
TCF3-206ENST00000585855 IGKV2-28A0A075B6P5 120 aa12.4□□□□□ -0.42
TCF3-206ENST00000585855 IGKV2D-28P01615 120 aa12.4□□□□□ -0.42
TCF3-206ENST00000585855 S100A7L2Q5SY68 101 aa12.4□□□□□ -0.42
TCF3-206ENST00000585855 CEND1Q8N111 149 aa12.4□□□□□ -0.42
TCF3-206ENST00000585855 IGLV1-50A0A075B6I6 118 aa12.39□□□□□ -0.43
TCF3-206ENST00000585855 TRBV10-3A0A0K0K1G6 114 aa12.38□□□□□ -0.43
TCF3-206ENST00000585855 FAM229AH3BQW9 127 aa12.38□□□□□ -0.43
TCF3-206ENST00000585855 DDTP30046 118 aa12.38□□□□□ -0.43
TCF3-206ENST00000585855 TMEM238LA0A1B0GVL6 79 aa12.37□□□□□ -0.43
TCF3-206ENST00000585855 A6NJY4 79 aa12.37□□□□□ -0.43
TCF3-206ENST00000585855 KRTAP11-1Q8IUC1 163 aa12.37□□□□□ -0.43
TCF3-206ENST00000585855 LINC00337Q8N6G1 96 aa12.37□□□□□ -0.43
TCF3-206ENST00000585855 OR13C6PQ8NH95 151 aa12.37□□□□□ -0.43
TCF3-206ENST00000585855 IGLV6-57P01721 117 aa12.36□□□□□ -0.43
TCF3-206ENST00000585855 RPL37AP61513 92 aaKnown RBP12.36□□□□□ -0.43
TCF3-206ENST00000585855 TMEM126AQ9H061 195 aa12.36□□□□□ -0.43
TCF3-206ENST00000585855 PSORS1C2Q9UIG4 136 aa12.36□□□□□ -0.43
TCF3-206ENST00000585855 TRAV13-2A0A0B4J235 113 aa12.35□□□□□ -0.43
TCF3-206ENST00000585855 CBY1Q9Y3M2 126 aa12.35□□□□□ -0.43
TCF3-206ENST00000585855 A6NDN8 102 aa12.34□□□□□ -0.43
TCF3-206ENST00000585855 Q8N1X5 172 aa12.34□□□□□ -0.43
TCF3-206ENST00000585855 RYR1P21817 5038 aa12.33□□□□□ -0.43
TCF3-206ENST00000585855 KIAA1109Q2LD37 5005 aa12.33□□□□□ -0.43
TCF3-206ENST00000585855 PRYO14603 147 aa12.33□□□□□ -0.44
TCF3-206ENST00000585855 PLA2G1BP04054 148 aaKnown RBP12.33□□□□□ -0.44
TCF3-206ENST00000585855 FXYD2P54710 66 aa12.33□□□□□ -0.44
TCF3-206ENST00000585855 KCNQ1DNQ9H478 68 aa12.33□□□□□ -0.44
TCF3-206ENST00000585855 HSPG2P98160 4391 aa12.32□□□□□ -0.44
TCF3-206ENST00000585855 CTAG1AP78358 180 aa12.32□□□□□ -0.44
TCF3-206ENST00000585855 REG3GQ6UW15 175 aa12.32□□□□□ -0.44
TCF3-206ENST00000585855 C1orf137Q5JT78 98 aa12.31□□□□□ -0.44
TCF3-206ENST00000585855 Q5VSD8 79 aa12.31□□□□□ -0.44
TCF3-206ENST00000585855 TRAV23DV6A0A075B6W5 121 aa12.3□□□□□ -0.44
TCF3-206ENST00000585855 M0R143 59 aa12.3□□□□□ -0.44
TCF3-206ENST00000585855 A0A0B4J2C4 111 aa12.29□□□□□ -0.44
TCF3-206ENST00000585855 CFC1BP0CG36 223 aa12.29□□□□□ -0.44
TCF3-206ENST00000585855 CFC1P0CG37 223 aa12.29□□□□□ -0.44
TCF3-206ENST00000585855 RAB37Q96AX2 223 aa12.29□□□□□ -0.44
TCF3-206ENST00000585855 BCE1O60756 84 aa12.28□□□□□ -0.44
TCF3-206ENST00000585855 RPL13AP40429 203 aaKnown RBP12.27□□□□□ -0.45
TCF3-206ENST00000585855 BVES-AS1Q5T3Y7 98 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms