RNA–Protein interactions for RNA: ENST00000585163.5

CDK5RAP3-237, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,519 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-237ENST00000585163 Q8NAQ8 132 aa9.64□□□□□ -0.87
CDK5RAP3-237ENST00000585163 MUC7Q8TAX7 377 aa9.63□□□□□ -0.87
CDK5RAP3-237ENST00000585163 RPL18AQ02543 176 aaKnown RBP9.63□□□□□ -0.87
CDK5RAP3-237ENST00000585163 C10orf25Q5T742 122 aa9.63□□□□□ -0.87
CDK5RAP3-237ENST00000585163 DPH3Q96FX2 82 aa9.63□□□□□ -0.87
CDK5RAP3-237ENST00000585163 MIFP14174 115 aa9.62□□□□□ -0.87
CDK5RAP3-237ENST00000585163 S100A7L2Q5SY68 101 aa9.62□□□□□ -0.87
CDK5RAP3-237ENST00000585163 LELP1Q5T871 98 aa9.62□□□□□ -0.87
CDK5RAP3-237ENST00000585163 UNQ6190/PRO20217Q6UXQ8 127 aa9.62□□□□□ -0.87
CDK5RAP3-237ENST00000585163 C6orf223Q8N319 242 aa9.62□□□□□ -0.87
CDK5RAP3-237ENST00000585163 A0A0J9YWU9 116 aa9.62□□□□□ -0.87
CDK5RAP3-237ENST00000585163 IGHV4-30-4P0DP06 118 aa9.62□□□□□ -0.87
CDK5RAP3-237ENST00000585163 SPAG11BQ08648 103 aa9.62□□□□□ -0.87
CDK5RAP3-237ENST00000585163 J3QKU1 62 aa9.61□□□□□ -0.87
CDK5RAP3-237ENST00000585163 LINC00575Q6W349 94 aa9.61□□□□□ -0.87
CDK5RAP3-237ENST00000585163 ZNF561-AS1K7EIQ3 104 aa9.61□□□□□ -0.87
CDK5RAP3-237ENST00000585163 C1orf195Q5TG92 126 aa9.61□□□□□ -0.87
CDK5RAP3-237ENST00000585163 PRR34Q9NV39 138 aa9.61□□□□□ -0.87
CDK5RAP3-237ENST00000585163 A0A087WVE0 104 aa9.6□□□□□ -0.87
CDK5RAP3-237ENST00000585163 CYSRT1A8MQ03 144 aa9.6□□□□□ -0.87
CDK5RAP3-237ENST00000585163 SPART-AS1P0CW21 52 aa9.6□□□□□ -0.87
CDK5RAP3-237ENST00000585163 HELZ2Q9BYK8 2649 aaKnown RBP9.59□□□□□ -0.87
CDK5RAP3-237ENST00000585163 CRYGAP11844 174 aa9.59□□□□□ -0.87
CDK5RAP3-237ENST00000585163 LINC00336Q6ZUF6 198 aa9.59□□□□□ -0.87
CDK5RAP3-237ENST00000585163 FASNP49327 2511 aaKnown RBP9.59□□□□□ -0.87
CDK5RAP3-237ENST00000585163 OXTP01178 125 aa9.58□□□□□ -0.88
CDK5RAP3-237ENST00000585163 HTN3P15516 51 aa9.58□□□□□ -0.88
CDK5RAP3-237ENST00000585163 KLK12Q9UKR0 248 aa9.58□□□□□ -0.88
CDK5RAP3-237ENST00000585163 FAM236DA0A1B0GTK5 79 aa9.58□□□□□ -0.88
CDK5RAP3-237ENST00000585163 IGLV6-57P01721 117 aa9.58□□□□□ -0.88
CDK5RAP3-237ENST00000585163 FAM236CP0DP71 79 aa9.58□□□□□ -0.88
CDK5RAP3-237ENST00000585163 TMEM258P61165 79 aa9.58□□□□□ -0.88
CDK5RAP3-237ENST00000585163 hADV29S1A0JD25 119 aa9.57□□□□□ -0.88
CDK5RAP3-237ENST00000585163 ATP5EP2Q5VTU8 51 aa9.57□□□□□ -0.88
CDK5RAP3-237ENST00000585163 ENHOQ6UWT2 76 aa9.57□□□□□ -0.88
CDK5RAP3-237ENST00000585163 GVQW2A0A096LPI5 108 aaPredicted RBP9.56□□□□□ -0.88
CDK5RAP3-237ENST00000585163 LYPD5Q6UWN5 251 aa9.56□□□□□ -0.88
CDK5RAP3-237ENST00000585163 USP17L23D6RBM5 183 aa9.56□□□□□ -0.88
CDK5RAP3-237ENST00000585163 SERP2Q8N6R1 65 aa9.55□□□□□ -0.88
CDK5RAP3-237ENST00000585163 TENM1Q9UKZ4 2725 aa9.55□□□□□ -0.88
CDK5RAP3-237ENST00000585163 RBM3P98179 157 aaKnown RBP9.54□□□□□ -0.88
CDK5RAP3-237ENST00000585163 INAFM1C9JVW0 142 aa9.53□□□□□ -0.88
CDK5RAP3-237ENST00000585163 Q6ZQT0 140 aa9.53□□□□□ -0.88
CDK5RAP3-237ENST00000585163 UBL5Q9BZL1 73 aa9.53□□□□□ -0.88
CDK5RAP3-237ENST00000585163 C6orf48Q9UBA6 75 aa9.53□□□□□ -0.88
CDK5RAP3-237ENST00000585163 LOC110117498A0A087WWA1 95 aa9.52□□□□□ -0.88
CDK5RAP3-237ENST00000585163 NOTCH2Q04721 2471 aa9.52□□□□□ -0.89
CDK5RAP3-237ENST00000585163 TRBV10-3A0A0K0K1G6 114 aa9.51□□□□□ -0.89
CDK5RAP3-237ENST00000585163 UPK3BQ9BT76 320 aa9.51□□□□□ -0.89
CDK5RAP3-237ENST00000585163 LAMTOR3Q9UHA4 124 aa9.51□□□□□ -0.89
CDK5RAP3-237ENST00000585163 Q6ZQY7 126 aa9.5□□□□□ -0.89
CDK5RAP3-237ENST00000585163 WFDC9Q8NEX5 89 aa9.5□□□□□ -0.89
CDK5RAP3-237ENST00000585163 CYSTM1Q9H1C7 97 aa9.5□□□□□ -0.89
CDK5RAP3-237ENST00000585163 OTOGQ6ZRI0 2925 aa9.5□□□□□ -0.89
CDK5RAP3-237ENST00000585163 XAGE1AQ9HD64 81 aa9.5□□□□□ -0.89
CDK5RAP3-237ENST00000585163 TRAV23DV6A0A075B6W5 121 aa9.49□□□□□ -0.89
CDK5RAP3-237ENST00000585163 NSD1Q96L73 2696 aaPredicted RBP9.49□□□□□ -0.89
CDK5RAP3-237ENST00000585163 H3BQ85 93 aa9.49□□□□□ -0.89
CDK5RAP3-237ENST00000585163 FAM19A1Q7Z5A9 133 aa9.49□□□□□ -0.89
CDK5RAP3-237ENST00000585163 DSCR8Q96T75 97 aa9.49□□□□□ -0.89
CDK5RAP3-237ENST00000585163 TRRAPQ9Y4A5 3859 aa9.48□□□□□ -0.89
CDK5RAP3-237ENST00000585163 DIRC1Q969H9 104 aa9.48□□□□□ -0.89
CDK5RAP3-237ENST00000585163 HIVEP1P15822 2718 aa9.48□□□□□ -0.89
CDK5RAP3-237ENST00000585163 M0R2N4 97 aa9.46□□□□□ -0.89
CDK5RAP3-237ENST00000585163 ZNF73O43830 326 aaPredicted RBP9.46□□□□□ -0.89
CDK5RAP3-237ENST00000585163 PDE6GP18545 87 aa9.46□□□□□ -0.9
CDK5RAP3-237ENST00000585163 WFDC10BQ8IUB3 73 aa9.46□□□□□ -0.9
CDK5RAP3-237ENST00000585163 H3BNG1 76 aa9.45□□□□□ -0.9
CDK5RAP3-237ENST00000585163 ATRQ13535 2644 aa9.45□□□□□ -0.9
CDK5RAP3-237ENST00000585163 GHRHP01286 108 aa9.45□□□□□ -0.9
CDK5RAP3-237ENST00000585163 KRTAP26-1Q6PEX3 210 aa9.45□□□□□ -0.9
CDK5RAP3-237ENST00000585163 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.45□□□□□ -0.9
CDK5RAP3-237ENST00000585163 CAMK2N2Q96S95 79 aa9.45□□□□□ -0.9
CDK5RAP3-237ENST00000585163 RETNQ9HD89 108 aa9.45□□□□□ -0.9
CDK5RAP3-237ENST00000585163 ELOF1P60002 83 aaKnown RBP9.44□□□□□ -0.9
CDK5RAP3-237ENST00000585163 HIGD2BQ4VC39 106 aa9.44□□□□□ -0.9
CDK5RAP3-237ENST00000585163 TEP1Q99973 2627 aaKnown RBP9.44□□□□□ -0.9
CDK5RAP3-237ENST00000585163 TRBV7-6A0A0J9YX20 115 aa9.44□□□□□ -0.9
CDK5RAP3-237ENST00000585163 VPREB1P12018 145 aa9.44□□□□□ -0.9
CDK5RAP3-237ENST00000585163 COX7BP24311 80 aa9.44□□□□□ -0.9
CDK5RAP3-237ENST00000585163 KPRPQ5T749 579 aaPredicted RBP9.44□□□□□ -0.9
CDK5RAP3-237ENST00000585163 EGFEM1PQ0D2K5 195 aa9.43□□□□□ -0.9
CDK5RAP3-237ENST00000585163 LINC01547P58512 204 aaPredicted RBP9.43□□□□□ -0.9
CDK5RAP3-237ENST00000585163 C4orf48Q5BLP8 95 aa9.43□□□□□ -0.9
CDK5RAP3-237ENST00000585163 HECTD1Q9ULT8 2610 aa9.43□□□□□ -0.9
CDK5RAP3-237ENST00000585163 Q6ZVQ6 151 aa9.42□□□□□ -0.9
CDK5RAP3-237ENST00000585163 TRBV7-4A0A0J9YYF1 115 aa9.41□□□□□ -0.9
CDK5RAP3-237ENST00000585163 Q6ZRU5 148 aa9.41□□□□□ -0.9
CDK5RAP3-237ENST00000585163 C15orf56Q8N910 161 aa9.41□□□□□ -0.9
CDK5RAP3-237ENST00000585163 M0R378 163 aa9.4□□□□□ -0.9
CDK5RAP3-237ENST00000585163 NDUFC2-KCTD14E9PQ53 114 aa9.4□□□□□ -0.91
CDK5RAP3-237ENST00000585163 A0A0U1RQV1 116 aa9.39□□□□□ -0.91
CDK5RAP3-237ENST00000585163 HAMPP81172 84 aa9.39□□□□□ -0.91
CDK5RAP3-237ENST00000585163 Q6ZTC4 211 aa9.39□□□□□ -0.91
CDK5RAP3-237ENST00000585163 CXCL6P80162 114 aa9.38□□□□□ -0.91
CDK5RAP3-237ENST00000585163 BCE1O60756 84 aa9.38□□□□□ -0.91
CDK5RAP3-237ENST00000585163 ESRGQ1W209 222 aa9.37□□□□□ -0.91
CDK5RAP3-237ENST00000585163 LINC00528Q8N1L1 170 aa9.37□□□□□ -0.91
CDK5RAP3-237ENST00000585163 EPM2AB3EWF7 344 aa9.36□□□□□ -0.91
CDK5RAP3-237ENST00000585163 OXLD1Q5BKU9 147 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms