RNA–Protein interactions for RNA: ENST00000584437.5

RNF43-208, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF43, Length 5,575 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-208ENST00000584437 IGKV2D-30A0A075B6S6 120 aa8.99□□□□□ -0.97
RNF43-208ENST00000584437 TRAV22A0A0B4J277 110 aa8.99□□□□□ -0.97
RNF43-208ENST00000584437 IGKV2-30P06310 120 aa8.99□□□□□ -0.97
RNF43-208ENST00000584437 LITAFQ99732 161 aa8.99□□□□□ -0.97
RNF43-208ENST00000584437 TLN1Q9Y490 2541 aaKnown RBP8.98□□□□□ -0.97
RNF43-208ENST00000584437 C7orf65Q6ZTY9 151 aa8.98□□□□□ -0.97
RNF43-208ENST00000584437 IGF2RP11717 2491 aa8.97□□□□□ -0.97
RNF43-208ENST00000584437 Q6ZRX8 168 aa8.97□□□□□ -0.97
RNF43-208ENST00000584437 H3BNG1 76 aa8.96□□□□□ -0.98
RNF43-208ENST00000584437 LINC00476Q8WZB0 136 aa8.96□□□□□ -0.98
RNF43-208ENST00000584437 C8orf87E5RJ46 101 aa8.95□□□□□ -0.98
RNF43-208ENST00000584437 SMR3AQ99954 134 aa8.95□□□□□ -0.98
RNF43-208ENST00000584437 C1orf134Q5TEV5 83 aa8.94□□□□□ -0.98
RNF43-208ENST00000584437 NCOR2Q9Y618 2525 aa8.94□□□□□ -0.98
RNF43-208ENST00000584437 ATP11AUNQ6ZP68 121 aa8.93□□□□□ -0.98
RNF43-208ENST00000584437 CYP4F30PQ9H0H9 118 aa8.93□□□□□ -0.98
RNF43-208ENST00000584437 GVQW2A0A096LPI5 108 aaPredicted RBP8.92□□□□□ -0.98
RNF43-208ENST00000584437 TRBV7-4A0A0J9YYF1 115 aa8.91□□□□□ -0.98
RNF43-208ENST00000584437 FHL3Q13643 280 aa8.91□□□□□ -0.98
RNF43-208ENST00000584437 KLK9Q2XQG4 91 aa8.91□□□□□ -0.98
RNF43-208ENST00000584437 MOBPQ13875 183 aa8.91□□□□□ -0.98
RNF43-208ENST00000584437 PIEZO1Q92508 2521 aa8.9□□□□□ -0.98
RNF43-208ENST00000584437 FSHBP01225 129 aa8.89□□□□□ -0.99
RNF43-208ENST00000584437 IGLV6-57P01721 117 aa8.89□□□□□ -0.99
RNF43-208ENST00000584437 FN1P02751 2386 aaKnown RBP8.89□□□□□ -0.99
RNF43-208ENST00000584437 LOC101927531A0A1B0GV80 90 aa8.88□□□□□ -0.99
RNF43-208ENST00000584437 KLKP1Q107X0 134 aa8.88□□□□□ -0.99
RNF43-208ENST00000584437 MUC4Q99102 2169 aa8.88□□□□□ -0.99
RNF43-208ENST00000584437 ABCA12Q86UK0 2595 aa8.88□□□□□ -0.99
RNF43-208ENST00000584437 USP9XQ93008 2570 aaPredicted RBP8.88□□□□□ -0.99
RNF43-208ENST00000584437 NHLRC4P0CG21 123 aaPredicted RBP8.87□□□□□ -0.99
RNF43-208ENST00000584437 VPREB1P12018 145 aa8.87□□□□□ -0.99
RNF43-208ENST00000584437 A8MUN3 132 aa8.85□□□□□ -0.99
RNF43-208ENST00000584437 ST20-AS1Q8NBB2 130 aa8.85□□□□□ -0.99
RNF43-208ENST00000584437 A8MWP4 228 aa8.84□□□□□ -0.99
RNF43-208ENST00000584437 EPM2AB3EWF7 344 aa8.83□□□□□ -1
RNF43-208ENST00000584437 LINC00313P59037 77 aa8.83□□□□□ -1
RNF43-208ENST00000584437 SPACA4Q8TDM5 124 aa8.83□□□□□ -1
RNF43-208ENST00000584437 PTPRBP23467 1997 aa8.83□□□□□ -1
RNF43-208ENST00000584437 C16orf90A8MZG2 172 aa8.83□□□□□ -1
RNF43-208ENST00000584437 COA5Q86WW8 74 aa8.83□□□□□ -1
RNF43-208ENST00000584437 JMJD1CQ15652 2540 aa8.82□□□□□ -1
RNF43-208ENST00000584437 RPL37AP61513 92 aaKnown RBP8.82□□□□□ -1
RNF43-208ENST00000584437 TLN2Q9Y4G6 2542 aa8.82□□□□□ -1
RNF43-208ENST00000584437 K7EQZ3 153 aa8.81□□□□□ -1
RNF43-208ENST00000584437 ZNF462Q96JM2 2506 aa8.81□□□□□ -1
RNF43-208ENST00000584437 PHF5AQ7RTV0 110 aaKnown RBP8.8□□□□□ -1
RNF43-208ENST00000584437 FAM229AH3BQW9 127 aa8.79□□□□□ -1
RNF43-208ENST00000584437 Q6ZRP5 223 aa8.78□□□□□ -1
RNF43-208ENST00000584437 PKD1L2Q7Z442 2459 aa8.78□□□□□ -1
RNF43-208ENST00000584437 UQCR11O14957 56 aa8.78□□□□□ -1
RNF43-208ENST00000584437 MRPL34Q9BQ48 92 aaKnown RBP8.78□□□□□ -1
RNF43-208ENST00000584437 LINC00528Q8N1L1 170 aa8.78□□□□□ -1
RNF43-208ENST00000584437 MDFIQ99750 246 aa8.77□□□□□ -1.01
RNF43-208ENST00000584437 KCNQ1DNQ9H478 68 aa8.77□□□□□ -1.01
RNF43-208ENST00000584437 H7BZZ5 65 aa8.77□□□□□ -1.01
RNF43-208ENST00000584437 CD164Q04900 197 aa8.77□□□□□ -1.01
RNF43-208ENST00000584437 SETD2Q9BYW2 2564 aaPredicted RBP8.76□□□□□ -1.01
RNF43-208ENST00000584437 LINC00336Q6ZUF6 198 aa8.76□□□□□ -1.01
RNF43-208ENST00000584437 Q8NAQ8 132 aa8.76□□□□□ -1.01
RNF43-208ENST00000584437 LINC01600Q96MT4 127 aa8.76□□□□□ -1.01
RNF43-208ENST00000584437 LRRK2Q5S007 2527 aa8.76□□□□□ -1.01
RNF43-208ENST00000584437 ZFYVE26Q68DK2 2539 aa8.75□□□□□ -1.01
RNF43-208ENST00000584437 USP9YO00507 2555 aaPredicted RBP8.75□□□□□ -1.01
RNF43-208ENST00000584437 WDR87Q6ZQQ6 2873 aa8.75□□□□□ -1.01
RNF43-208ENST00000584437 EIF4EBP3O60516 100 aaPredicted RBP8.74□□□□□ -1.01
RNF43-208ENST00000584437 SPINT4Q6UDR6 99 aa8.74□□□□□ -1.01
RNF43-208ENST00000584437 IGLV8-61A0A075B6I0 122 aa8.74□□□□□ -1.01
RNF43-208ENST00000584437 IGLV1-50A0A075B6I6 118 aa8.73□□□□□ -1.01
RNF43-208ENST00000584437 COL27A1Q8IZC6 1860 aaPredicted RBP8.73□□□□□ -1.01
RNF43-208ENST00000584437 PRR15Q8IV56 129 aa8.72□□□□□ -1.01
RNF43-208ENST00000584437 DNAH10OSP0CZ25 163 aa8.71□□□□□ -1.01
RNF43-208ENST00000584437 LINC00588Q9Y4M8 146 aa8.71□□□□□ -1.02
RNF43-208ENST00000584437 IGFL1Q6UW32 110 aa8.69□□□□□ -1.02
RNF43-208ENST00000584437 RTL8CO15255 209 aa8.69□□□□□ -1.02
RNF43-208ENST00000584437 NBDYA0A0U1RRE5 68 aa8.68□□□□□ -1.02
RNF43-208ENST00000584437 KTN1-AS1Q86SY8 53 aa8.68□□□□□ -1.02
RNF43-208ENST00000584437 TYMSOSQ8TAI1 123 aa8.68□□□□□ -1.02
RNF43-208ENST00000584437 C8orf17Q9NRJ1 99 aa8.68□□□□□ -1.02
RNF43-208ENST00000584437 MIR22HGQ0VDD5 57 aa8.67□□□□□ -1.02
RNF43-208ENST00000584437 FAM168BA1KXE4 195 aa8.66□□□□□ -1.02
RNF43-208ENST00000584437 CHTF8P0CG12 524 aa8.66□□□□□ -1.02
RNF43-208ENST00000584437 SSBP3-AS1Q7Z2R9 100 aa8.66□□□□□ -1.02
RNF43-208ENST00000584437 Q96NJ1 140 aa8.66□□□□□ -1.02
RNF43-208ENST00000584437 PRR34Q9NV39 138 aa8.66□□□□□ -1.02
RNF43-208ENST00000584437 Q8N377 158 aa8.66□□□□□ -1.02
RNF43-208ENST00000584437 LCA10Q71F78 164 aa8.65□□□□□ -1.02
RNF43-208ENST00000584437 CSNK1G2-AS1Q8NCQ2 148 aa8.64□□□□□ -1.03
RNF43-208ENST00000584437 COL4A2P08572 1712 aa8.64□□□□□ -1.03
RNF43-208ENST00000584437 SPANXA2-OT1Q8N9U9 137 aa8.63□□□□□ -1.03
RNF43-208ENST00000584437 A0A1B0GVX0 72 aa8.63□□□□□ -1.03
RNF43-208ENST00000584437 ANKRD11Q6UB99 2663 aaPredicted RBP8.62□□□□□ -1.03
RNF43-208ENST00000584437 PLA2G2DQ9UNK4 145 aa8.62□□□□□ -1.03
RNF43-208ENST00000584437 CEP295Q9C0D2 2601 aa8.6□□□□□ -1.03
RNF43-208ENST00000584437 C15orf56Q8N910 161 aa8.59□□□□□ -1.03
RNF43-208ENST00000584437 TLX1NBP0CAT3 122 aa8.59□□□□□ -1.03
RNF43-208ENST00000584437 CRIPTQ9P021 101 aa8.59□□□□□ -1.04
RNF43-208ENST00000584437 OBSCN-AS1Q96MR7 158 aa8.57□□□□□ -1.04
RNF43-208ENST00000584437 WIPF1O43516 503 aa8.57□□□□□ -1.04
RNF43-208ENST00000584437 C9orf129Q5T035 196 aaKnown RBP8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 176.5 ms