RNA–Protein interactions for RNA: ENST00000583593.2

CCDC57-218, Transcript of coiled-coil domain containing 57, humanhuman

TSL 3

Gene CCDC57, Length 429 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-218ENST00000583593 FA2HQ7L5A8 372 aa7.58□□□□□ -1.2
CCDC57-218ENST00000583593 NDUFA6P56556 154 aa7.57□□□□□ -1.2
CCDC57-218ENST00000583593 LINC00337Q8N6G1 96 aa7.57□□□□□ -1.2
CCDC57-218ENST00000583593 Q8NBF4 154 aa7.57□□□□□ -1.2
CCDC57-218ENST00000583593 URB1-AS1Q96HZ7 61 aa7.57□□□□□ -1.2
CCDC57-218ENST00000583593 SMCO4Q9NRQ5 59 aa7.57□□□□□ -1.2
CCDC57-218ENST00000583593 FSIP2Q5CZC0 6907 aa7.57□□□□□ -1.2
CCDC57-218ENST00000583593 C11orf86A6NJI1 115 aa7.56□□□□□ -1.2
CCDC57-218ENST00000583593 LINC01547P58512 204 aaPredicted RBP7.56□□□□□ -1.2
CCDC57-218ENST00000583593 C4orf48Q5BLP8 95 aa7.56□□□□□ -1.2
CCDC57-218ENST00000583593 KRTAP4-16G5E9R7 235 aaPredicted RBP7.54□□□□□ -1.2
CCDC57-218ENST00000583593 SPRR1AP35321 89 aa7.54□□□□□ -1.2
CCDC57-218ENST00000583593 FABP9Q0Z7S8 132 aa7.54□□□□□ -1.2
CCDC57-218ENST00000583593 SMCR5Q8TEV8 140 aa7.54□□□□□ -1.2
CCDC57-218ENST00000583593 ZNF706Q9Y5V0 76 aaPredicted RBP7.54□□□□□ -1.2
CCDC57-218ENST00000583593 A0A0U1RRA0 63 aa7.53□□□□□ -1.2
CCDC57-218ENST00000583593 TMEM218A2RU14 115 aa7.53□□□□□ -1.2
CCDC57-218ENST00000583593 SPINK1P00995 79 aa7.53□□□□□ -1.2
CCDC57-218ENST00000583593 LINC00158P58513 81 aa7.53□□□□□ -1.2
CCDC57-218ENST00000583593 PRYO14603 147 aa7.52□□□□□ -1.21
CCDC57-218ENST00000583593 S100PP25815 95 aa7.52□□□□□ -1.21
CCDC57-218ENST00000583593 PMCHL1Q16048 86 aa7.52□□□□□ -1.21
CCDC57-218ENST00000583593 CLLU1Q5K131 121 aa7.52□□□□□ -1.21
CCDC57-218ENST00000583593 TMEM170BQ5T4T1 132 aa7.52□□□□□ -1.21
CCDC57-218ENST00000583593 SFTA2Q6UW10 78 aa7.52□□□□□ -1.21
CCDC57-218ENST00000583593 BAGE3Q86Y29 109 aa7.52□□□□□ -1.21
CCDC57-218ENST00000583593 HBDP02042 147 aa7.51□□□□□ -1.21
CCDC57-218ENST00000583593 LINC00614P0C842 121 aa7.51□□□□□ -1.21
CCDC57-218ENST00000583593 SEC61BP60468 96 aaKnown RBP7.51□□□□□ -1.21
CCDC57-218ENST00000583593 COX19Q49B96 90 aa7.51□□□□□ -1.21
CCDC57-218ENST00000583593 LINC00483Q53H64 154 aa7.51□□□□□ -1.21
CCDC57-218ENST00000583593 KCNQ1DNQ9H478 68 aa7.51□□□□□ -1.21
CCDC57-218ENST00000583593 LCE2CQ5TA81 110 aa7.5□□□□□ -1.21
CCDC57-218ENST00000583593 C18orf32Q8TCD1 76 aa7.5□□□□□ -1.21
CCDC57-218ENST00000583593 CRCT1Q9UGL9 99 aa7.5□□□□□ -1.21
CCDC57-218ENST00000583593 NCR3O14931 201 aa7.49□□□□□ -1.21
CCDC57-218ENST00000583593 SMIM13P0DJ93 91 aa7.49□□□□□ -1.21
CCDC57-218ENST00000583593 UQCC3Q6UW78 93 aa7.49□□□□□ -1.21
CCDC57-218ENST00000583593 Q8N377 158 aa7.49□□□□□ -1.21
CCDC57-218ENST00000583593 TMEM223A0PJW6 202 aa7.48□□□□□ -1.21
CCDC57-218ENST00000583593 BOD1L2Q8IYS8 172 aa7.48□□□□□ -1.21
CCDC57-218ENST00000583593 SEC11CQ9BY50 192 aa7.48□□□□□ -1.21
CCDC57-218ENST00000583593 ERC2-IT1O76042 136 aa7.47□□□□□ -1.21
CCDC57-218ENST00000583593 XP32Q5T750 250 aa7.47□□□□□ -1.21
CCDC57-218ENST00000583593 CHTOPQ9Y3Y2 248 aaKnown RBP7.47□□□□□ -1.21
CCDC57-218ENST00000583593 TRBV10-3A0A0K0K1G6 114 aa7.46□□□□□ -1.22
CCDC57-218ENST00000583593 ETDCA0A1B0GVM5 59 aa7.46□□□□□ -1.22
CCDC57-218ENST00000583593 RPS29P62273 56 aaKnown RBP7.46□□□□□ -1.22
CCDC57-218ENST00000583593 MOBPQ13875 183 aa7.46□□□□□ -1.22
CCDC57-218ENST00000583593 GAGE2AQ6NT46 116 aa7.46□□□□□ -1.22
CCDC57-218ENST00000583593 MIR7-3HGQ8N6C7 128 aa7.46□□□□□ -1.22
CCDC57-218ENST00000583593 IGLV9-49A0A0B4J1Y8 123 aa7.45□□□□□ -1.22
CCDC57-218ENST00000583593 B5MCH6 92 aa7.45□□□□□ -1.22
CCDC57-218ENST00000583593 KRTAP19-2Q3LHN2 52 aa7.45□□□□□ -1.22
CCDC57-218ENST00000583593 SSBP3-AS1Q7Z2R9 100 aa7.45□□□□□ -1.22
CCDC57-218ENST00000583593 TRAPPC1Q9Y5R8 145 aa7.44□□□□□ -1.22
CCDC57-218ENST00000583593 ATP6V1G1O75348 118 aa7.43□□□□□ -1.22
CCDC57-218ENST00000583593 MEIG1Q5JSS6 88 aa7.43□□□□□ -1.22
CCDC57-218ENST00000583593 C10orf91Q5T1B1 145 aa7.43□□□□□ -1.22
CCDC57-218ENST00000583593 FAM19A2Q8N3H0 131 aa7.43□□□□□ -1.22
CCDC57-218ENST00000583593 Q9BRP9 147 aa7.43□□□□□ -1.22
CCDC57-218ENST00000583593 NDUFA12Q9UI09 145 aa7.43□□□□□ -1.22
CCDC57-218ENST00000583593 TRAV12-1A0A0B4J245 112 aa7.42□□□□□ -1.22
CCDC57-218ENST00000583593 SLC25A20O43772 301 aa7.42□□□□□ -1.22
CCDC57-218ENST00000583593 IFITM2Q01629 132 aa7.42□□□□□ -1.22
CCDC57-218ENST00000583593 RPS10P5Q9NQ39 176 aa7.42□□□□□ -1.22
CCDC57-218ENST00000583593 HERV-K104P63124 156 aa7.41□□□□□ -1.22
CCDC57-218ENST00000583593 RHEBQ15382 184 aa7.4□□□□□ -1.22
CCDC57-218ENST00000583593 LOC107984156A0A0G2JMH3 177 aa7.39□□□□□ -1.23
CCDC57-218ENST00000583593 MT1HP80294 61 aa7.39□□□□□ -1.23
CCDC57-218ENST00000583593 ARL17AQ8IVW1 177 aa7.39□□□□□ -1.23
CCDC57-218ENST00000583593 IFI27L1Q96BM0 104 aa7.39□□□□□ -1.23
CCDC57-218ENST00000583593 DDTP30046 118 aa7.38□□□□□ -1.23
CCDC57-218ENST00000583593 Q6ZRX8 168 aa7.38□□□□□ -1.23
CCDC57-218ENST00000583593 LINC00587B1AMM8 73 aa7.37□□□□□ -1.23
CCDC57-218ENST00000583593 TSPEAR-AS2P59090 65 aa7.37□□□□□ -1.23
CCDC57-218ENST00000583593 TRBV10-2A0A0K0K1G8 114 aa7.36□□□□□ -1.23
CCDC57-218ENST00000583593 MYMXA0A1B0GTQ4 84 aa7.36□□□□□ -1.23
CCDC57-218ENST00000583593 S100A12P80511 92 aa7.36□□□□□ -1.23
CCDC57-218ENST00000583593 COMMD7Q86VX2 200 aa7.36□□□□□ -1.23
CCDC57-218ENST00000583593 CHCHD1Q96BP2 118 aaKnown RBP7.35□□□□□ -1.23
CCDC57-218ENST00000583593 MAP1LC3CQ9BXW4 147 aa7.35□□□□□ -1.23
CCDC57-218ENST00000583593 IGLV6-57P01721 117 aa7.34□□□□□ -1.23
CCDC57-218ENST00000583593 C9orf153Q5TBE3 101 aa7.34□□□□□ -1.23
CCDC57-218ENST00000583593 ST20-AS1Q8NBB2 130 aa7.34□□□□□ -1.23
CCDC57-218ENST00000583593 PCOTHQ58A44 107 aa7.33□□□□□ -1.24
CCDC57-218ENST00000583593 LEPROTO15243 131 aa7.32□□□□□ -1.24
CCDC57-218ENST00000583593 LORP23490 312 aaPredicted RBP7.31□□□□□ -1.24
CCDC57-218ENST00000583593 SPANXB1Q9NS25 103 aaPredicted RBP7.31□□□□□ -1.24
CCDC57-218ENST00000583593 IGLV8-61A0A075B6I0 122 aa7.3□□□□□ -1.24
CCDC57-218ENST00000583593 TRAV23DV6A0A075B6W5 121 aa7.3□□□□□ -1.24
CCDC57-218ENST00000583593 EIF4EBP3O60516 100 aaPredicted RBP7.3□□□□□ -1.24
CCDC57-218ENST00000583593 NDUFC2O95298 119 aa7.3□□□□□ -1.24
CCDC57-218ENST00000583593 SOSTDC1Q6X4U4 206 aa7.3□□□□□ -1.24
CCDC57-218ENST00000583593 YPEL4Q96NS1 127 aa7.3□□□□□ -1.24
CCDC57-218ENST00000583593 CFC1BP0CG36 223 aa7.29□□□□□ -1.24
CCDC57-218ENST00000583593 JOSD1Q15040 202 aaPredicted RBP7.29□□□□□ -1.24
CCDC57-218ENST00000583593 S100A7L2Q5SY68 101 aa7.29□□□□□ -1.24
CCDC57-218ENST00000583593 C9orf92A6NGG3 77 aa7.28□□□□□ -1.24
CCDC57-218ENST00000583593 H0Y8G0 127 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 103.8 ms