RNA–Protein interactions for RNA: ENST00000583344.1

SMCHD1-208, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 738 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-208ENST00000583344 TRAV13-2A0A0B4J235 113 aa2.51□□□□□ -2.01
SMCHD1-208ENST00000583344 C19orf84I3L1E1 186 aa2.51□□□□□ -2.01
SMCHD1-208ENST00000583344 INAFM2P0DMQ5 153 aa2.51□□□□□ -2.01
SMCHD1-208ENST00000583344 SYNJ2BPP57105 145 aa2.51□□□□□ -2.01
SMCHD1-208ENST00000583344 DEFB131AP59861 70 aa2.51□□□□□ -2.01
SMCHD1-208ENST00000583344 DEFB112Q30KQ8 113 aa2.51□□□□□ -2.01
SMCHD1-208ENST00000583344 KRTAP21-3Q3LHN1 58 aa2.51□□□□□ -2.01
SMCHD1-208ENST00000583344 KRTAP5-7Q6L8G8 165 aa2.51□□□□□ -2.01
SMCHD1-208ENST00000583344 SOSTDC1Q6X4U4 206 aa2.51□□□□□ -2.01
SMCHD1-208ENST00000583344 CAMK2N1Q7Z7J9 78 aa2.51□□□□□ -2.01
SMCHD1-208ENST00000583344 CDC42SE2Q9NRR3 84 aa2.51□□□□□ -2.01
SMCHD1-208ENST00000583344 LRBAP50851 2863 aa2.51□□□□□ -2.01
SMCHD1-208ENST00000583344 LRRK2Q5S007 2527 aa2.5□□□□□ -2.01
SMCHD1-208ENST00000583344 USP9YO00507 2555 aaPredicted RBP2.5□□□□□ -2.01
SMCHD1-208ENST00000583344 NF1P21359 2839 aa2.5□□□□□ -2.01
SMCHD1-208ENST00000583344 ADGRG4Q8IZF6 3080 aa2.5□□□□□ -2.01
SMCHD1-208ENST00000583344 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.5□□□□□ -2.01
SMCHD1-208ENST00000583344 IGHV3-73A0A0B4J1V6 119 aa2.5□□□□□ -2.01
SMCHD1-208ENST00000583344 A0A1B0GX51 115 aa2.5□□□□□ -2.01
SMCHD1-208ENST00000583344 IGKV2-29A2NJV5 120 aaPredicted RBP2.5□□□□□ -2.01
SMCHD1-208ENST00000583344 KNCNA6PVL3 124 aa2.5□□□□□ -2.01
SMCHD1-208ENST00000583344 KRTAP4-16G5E9R7 235 aaPredicted RBP2.5□□□□□ -2.01
SMCHD1-208ENST00000583344 ZNF861PO60384 105 aa2.5□□□□□ -2.01
SMCHD1-208ENST00000583344 CRYGAP11844 174 aa2.5□□□□□ -2.01
SMCHD1-208ENST00000583344 COX7CP15954 63 aa2.5□□□□□ -2.01
SMCHD1-208ENST00000583344 CMC4P56277 68 aaPredicted RBP2.5□□□□□ -2.01
SMCHD1-208ENST00000583344 DEFB114Q30KQ6 69 aa2.5□□□□□ -2.01
SMCHD1-208ENST00000583344 C10orf99Q6UWK7 81 aa2.5□□□□□ -2.01
SMCHD1-208ENST00000583344 NTM-AS1Q6ZSK4 140 aa2.5□□□□□ -2.01
SMCHD1-208ENST00000583344 SMCR5Q8TEV8 140 aa2.5□□□□□ -2.01
SMCHD1-208ENST00000583344 C16orf74Q96GX8 76 aa2.5□□□□□ -2.01
SMCHD1-208ENST00000583344 MUC19Q7Z5P9 8384 aa2.49□□□□□ -2.01
SMCHD1-208ENST00000583344 BOD1L1Q8NFC6 3051 aa2.49□□□□□ -2.01
SMCHD1-208ENST00000583344 A0A096LNT2 108 aa2.49□□□□□ -2.01
SMCHD1-208ENST00000583344 IBA57-AS1B1ANH7 110 aa2.49□□□□□ -2.01
SMCHD1-208ENST00000583344 NDUFS5O43920 106 aa2.49□□□□□ -2.01
SMCHD1-208ENST00000583344 BCE1O60756 84 aa2.49□□□□□ -2.01
SMCHD1-208ENST00000583344 NPC2P61916 151 aa2.49□□□□□ -2.01
SMCHD1-208ENST00000583344 RNASE13Q5GAN3 156 aaKnown RBP2.49□□□□□ -2.01
SMCHD1-208ENST00000583344 Q6JHZ5 121 aa2.49□□□□□ -2.01
SMCHD1-208ENST00000583344 LYPD5Q6UWN5 251 aa2.49□□□□□ -2.01
SMCHD1-208ENST00000583344 C1orf158Q8N1D5 194 aa2.49□□□□□ -2.01
SMCHD1-208ENST00000583344 SMIM20Q8N5G0 67 aa2.49□□□□□ -2.01
SMCHD1-208ENST00000583344 CCL19Q99731 98 aa2.49□□□□□ -2.01
SMCHD1-208ENST00000583344 VPREB3Q9UKI3 123 aa2.49□□□□□ -2.01
SMCHD1-208ENST00000583344 KLK5Q9Y337 293 aaPredicted RBP2.49□□□□□ -2.01
SMCHD1-208ENST00000583344 POLQO75417 2590 aa2.49□□□□□ -2.01
SMCHD1-208ENST00000583344 POLEQ07864 2286 aa2.48□□□□□ -2.01
SMCHD1-208ENST00000583344 CSMD1Q96PZ7 3565 aa2.48□□□□□ -2.01
SMCHD1-208ENST00000583344 OTOGQ6ZRI0 2925 aa2.48□□□□□ -2.01
SMCHD1-208ENST00000583344 IGKV2-28A0A075B6P5 120 aa2.48□□□□□ -2.01
SMCHD1-208ENST00000583344 FAM236AA0A1B0GUQ0 79 aa2.48□□□□□ -2.01
SMCHD1-208ENST00000583344 FAM236BA0A1B0GV22 79 aa2.48□□□□□ -2.01
SMCHD1-208ENST00000583344 TRBV6-4A0A1B0GX49 114 aa2.48□□□□□ -2.01
SMCHD1-208ENST00000583344 ATOX1O00244 68 aa2.48□□□□□ -2.01
SMCHD1-208ENST00000583344 INSP01308 110 aa2.48□□□□□ -2.01
SMCHD1-208ENST00000583344 IGKV2D-28P01615 120 aa2.48□□□□□ -2.01
SMCHD1-208ENST00000583344 PRM2P04554 102 aa2.48□□□□□ -2.01
SMCHD1-208ENST00000583344 LINC00694P0DN24 101 aa2.48□□□□□ -2.01
SMCHD1-208ENST00000583344 HTN1P15515 57 aa2.48□□□□□ -2.01
SMCHD1-208ENST00000583344 UBE2AP49459 152 aa2.48□□□□□ -2.01
SMCHD1-208ENST00000583344 C6orf99Q4VX62 202 aa2.48□□□□□ -2.01
SMCHD1-208ENST00000583344 COX7B2Q8TF08 81 aa2.48□□□□□ -2.01
SMCHD1-208ENST00000583344 C4orf3Q8WVX3 66 aa2.48□□□□□ -2.01
SMCHD1-208ENST00000583344 TMEM243Q9BU79 118 aa2.48□□□□□ -2.01
SMCHD1-208ENST00000583344 ITPR2Q14571 2701 aa2.48□□□□□ -2.01
SMCHD1-208ENST00000583344 SETD2Q9BYW2 2564 aaPredicted RBP2.48□□□□□ -2.01
SMCHD1-208ENST00000583344 HRNRQ86YZ3 2850 aaPredicted RBP2.47□□□□□ -2.01
SMCHD1-208ENST00000583344 PKDREJQ9NTG1 2253 aa2.47□□□□□ -2.01
SMCHD1-208ENST00000583344 CENPEQ02224 2701 aa2.47□□□□□ -2.01
SMCHD1-208ENST00000583344 TRAV13-1A0A0B4J241 112 aa2.47□□□□□ -2.01
SMCHD1-208ENST00000583344 TRBV10-3A0A0K0K1G6 114 aa2.47□□□□□ -2.01
SMCHD1-208ENST00000583344 NDUFC2-KCTD14E9PQ53 114 aa2.47□□□□□ -2.01
SMCHD1-208ENST00000583344 PSPHP1O15172 72 aa2.47□□□□□ -2.01
SMCHD1-208ENST00000583344 CCKP06307 115 aa2.47□□□□□ -2.01
SMCHD1-208ENST00000583344 CCL18P55774 89 aa2.47□□□□□ -2.01
SMCHD1-208ENST00000583344 C9orf153Q5TBE3 101 aa2.47□□□□□ -2.01
SMCHD1-208ENST00000583344 TMEM86BQ8N661 226 aa2.47□□□□□ -2.01
SMCHD1-208ENST00000583344 LINC00337Q8N6G1 96 aa2.47□□□□□ -2.01
SMCHD1-208ENST00000583344 SERP2Q8N6R1 65 aa2.47□□□□□ -2.01
SMCHD1-208ENST00000583344 SMIM11BQ8TCY0 68 aa2.47□□□□□ -2.01
SMCHD1-208ENST00000583344 SND1-IT1Q9HBX3 110 aa2.47□□□□□ -2.01
SMCHD1-208ENST00000583344 PRO0628Q9UI54 55 aa2.47□□□□□ -2.01
SMCHD1-208ENST00000583344 ROS1P08922 2347 aa2.47□□□□□ -2.01
SMCHD1-208ENST00000583344 DNHD1Q96M86 4753 aa2.46□□□□□ -2.01
SMCHD1-208ENST00000583344 PLAC8L1A1L4L8 177 aa2.46□□□□□ -2.02
SMCHD1-208ENST00000583344 JMJD7-PLA2G4BH0Y9G9 81 aa2.46□□□□□ -2.02
SMCHD1-208ENST00000583344 NDUFC2O95298 119 aa2.46□□□□□ -2.02
SMCHD1-208ENST00000583344 CRPP02741 224 aa2.46□□□□□ -2.02
SMCHD1-208ENST00000583344 S100A7L2Q5SY68 101 aa2.46□□□□□ -2.02
SMCHD1-208ENST00000583344 Q6ZTI0 123 aa2.46□□□□□ -2.02
SMCHD1-208ENST00000583344 MIR7-3HGQ8N6C7 128 aa2.46□□□□□ -2.02
SMCHD1-208ENST00000583344 Q8N9L7 120 aa2.46□□□□□ -2.02
SMCHD1-208ENST00000583344 DPH3Q96FX2 82 aa2.46□□□□□ -2.02
SMCHD1-208ENST00000583344 UPK3BQ9BT76 320 aa2.46□□□□□ -2.02
SMCHD1-208ENST00000583344 PDZD2O15018 2839 aa2.46□□□□□ -2.02
SMCHD1-208ENST00000583344 CELSR2Q9HCU4 2923 aa2.46□□□□□ -2.02
SMCHD1-208ENST00000583344 NACAE9PAV3 2078 aa2.46□□□□□ -2.02
SMCHD1-208ENST00000583344 TRGV1A0A0A0MS02 117 aa2.45□□□□□ -2.02
SMCHD1-208ENST00000583344 TRBV6-8A0A0A6YYG3 113 aa2.45□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms