RNA–Protein interactions for RNA: ENST00000583327.2

ITGB4-209, Transcript of integrin subunit beta 4, humanhuman

TSL 3

Gene ITGB4, Length 699 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-209ENST00000583327 RPL18AQ02543 176 aaKnown RBP8.67□□□□□ -1.02
ITGB4-209ENST00000583327 GAGE2EQ4V326 116 aa8.67□□□□□ -1.02
ITGB4-209ENST00000583327 SOSTDC1Q6X4U4 206 aa8.67□□□□□ -1.02
ITGB4-209ENST00000583327 KRTAP7-1Q8IUC3 87 aa8.67□□□□□ -1.02
ITGB4-209ENST00000583327 DAND5Q8N907 189 aa8.67□□□□□ -1.02
ITGB4-209ENST00000583327 PRO1933Q9H354 126 aa8.67□□□□□ -1.02
ITGB4-209ENST00000583327 GAGE2DQ9UEU5 116 aa8.67□□□□□ -1.02
ITGB4-209ENST00000583327 CHTF8P0CG12 524 aa8.66□□□□□ -1.02
ITGB4-209ENST00000583327 XAGE1AQ9HD64 81 aa8.66□□□□□ -1.02
ITGB4-209ENST00000583327 IFITM1P13164 125 aa8.65□□□□□ -1.02
ITGB4-209ENST00000583327 Q8NDZ9 215 aa8.65□□□□□ -1.02
ITGB4-209ENST00000583327 LINC00308Q8TCZ7 52 aa8.65□□□□□ -1.02
ITGB4-209ENST00000583327 IGKV2-24A0A0C4DH68 120 aa8.64□□□□□ -1.03
ITGB4-209ENST00000583327 A0A1W2PNN7 141 aa8.64□□□□□ -1.03
ITGB4-209ENST00000583327 IGLV5-37A0A075B6J1 123 aa8.63□□□□□ -1.03
ITGB4-209ENST00000583327 TAL2Q16559 108 aa8.63□□□□□ -1.03
ITGB4-209ENST00000583327 MUSTN1Q8IVN3 82 aa8.63□□□□□ -1.03
ITGB4-209ENST00000583327 PLAC8Q9NZF1 115 aa8.63□□□□□ -1.03
ITGB4-209ENST00000583327 FAM168BA1KXE4 195 aa8.62□□□□□ -1.03
ITGB4-209ENST00000583327 NDUFC2O95298 119 aa8.62□□□□□ -1.03
ITGB4-209ENST00000583327 VPREB1P12018 145 aa8.62□□□□□ -1.03
ITGB4-209ENST00000583327 SRSF9Q13242 221 aaKnown RBP eCLIP8.62□□□□□ -1.03
ITGB4-209ENST00000583327 EPPK1P58107 5090 aaKnown RBP8.61□□□□□ -1.03
ITGB4-209ENST00000583327 A0A087WYN8 130 aa8.61□□□□□ -1.03
ITGB4-209ENST00000583327 TSTD3H0UI37 97 aa8.61□□□□□ -1.03
ITGB4-209ENST00000583327 SERTAD4-AS1Q5TG53 156 aa8.61□□□□□ -1.03
ITGB4-209ENST00000583327 XGP55808 180 aa8.6□□□□□ -1.03
ITGB4-209ENST00000583327 CIRBP-AS1Q8TBR5 109 aa8.6□□□□□ -1.03
ITGB4-209ENST00000583327 COPS9Q8WXC6 57 aa8.6□□□□□ -1.03
ITGB4-209ENST00000583327 HIST1H4GQ99525 98 aa8.6□□□□□ -1.03
ITGB4-209ENST00000583327 NPC2P61916 151 aa8.59□□□□□ -1.03
ITGB4-209ENST00000583327 RPL24P83731 157 aaKnown RBP8.59□□□□□ -1.03
ITGB4-209ENST00000583327 APOBP04114 4563 aaKnown RBP8.59□□□□□ -1.03
ITGB4-209ENST00000583327 HNRNPA3P51991 378 aaKnown RBP8.58□□□□□ -1.04
ITGB4-209ENST00000583327 HSD52Q0P140 79 aa8.58□□□□□ -1.04
ITGB4-209ENST00000583327 SCXQ7RTU7 201 aa8.58□□□□□ -1.04
ITGB4-209ENST00000583327 CEND1Q8N111 149 aa8.58□□□□□ -1.04
ITGB4-209ENST00000583327 C22orf24Q9Y442 160 aa8.58□□□□□ -1.04
ITGB4-209ENST00000583327 IGKV2-28A0A075B6P5 120 aa8.57□□□□□ -1.04
ITGB4-209ENST00000583327 TRBV10-2A0A0K0K1G8 114 aa8.57□□□□□ -1.04
ITGB4-209ENST00000583327 IGKV2D-28P01615 120 aa8.57□□□□□ -1.04
ITGB4-209ENST00000583327 PRR3P79522 188 aaKnown RBP8.57□□□□□ -1.04
ITGB4-209ENST00000583327 DPH3Q96FX2 82 aa8.57□□□□□ -1.04
ITGB4-209ENST00000583327 A4D1N5 150 aa8.55□□□□□ -1.04
ITGB4-209ENST00000583327 M0R378 163 aa8.55□□□□□ -1.04
ITGB4-209ENST00000583327 DDTP30046 118 aa8.55□□□□□ -1.04
ITGB4-209ENST00000583327 CTAG1AP78358 180 aa8.55□□□□□ -1.04
ITGB4-209ENST00000583327 FAM19A5Q7Z5A7 132 aaPredicted RBP8.55□□□□□ -1.04
ITGB4-209ENST00000583327 CDK2AP2O75956 126 aa8.54□□□□□ -1.04
ITGB4-209ENST00000583327 M0QXV9 152 aa8.53□□□□□ -1.04
ITGB4-209ENST00000583327 FXYD2P54710 66 aa8.53□□□□□ -1.04
ITGB4-209ENST00000583327 PHF5AQ7RTV0 110 aaKnown RBP8.53□□□□□ -1.04
ITGB4-209ENST00000583327 MRPL55Q7Z7F7 128 aaKnown RBP8.53□□□□□ -1.04
ITGB4-209ENST00000583327 C7orf33Q8WU49 177 aa8.53□□□□□ -1.04
ITGB4-209ENST00000583327 LINC00167Q96N53 147 aa8.53□□□□□ -1.04
ITGB4-209ENST00000583327 LBHQ53QV2 105 aaPredicted RBP8.52□□□□□ -1.05
ITGB4-209ENST00000583327 BVES-AS1Q5T3Y7 98 aa8.52□□□□□ -1.05
ITGB4-209ENST00000583327 LINC00337Q8N6G1 96 aa8.52□□□□□ -1.05
ITGB4-209ENST00000583327 IGLV1-50A0A075B6I6 118 aa8.51□□□□□ -1.05
ITGB4-209ENST00000583327 A0A1B0GWB2 263 aa8.51□□□□□ -1.05
ITGB4-209ENST00000583327 IGLV6-57P01721 117 aa8.51□□□□□ -1.05
ITGB4-209ENST00000583327 CFC1BP0CG36 223 aa8.51□□□□□ -1.05
ITGB4-209ENST00000583327 CFC1P0CG37 223 aa8.51□□□□□ -1.05
ITGB4-209ENST00000583327 KRTAP11-1Q8IUC1 163 aa8.51□□□□□ -1.05
ITGB4-209ENST00000583327 NKAPP1Q8N9T2 125 aa8.51□□□□□ -1.05
ITGB4-209ENST00000583327 NCR3O14931 201 aa8.5□□□□□ -1.05
ITGB4-209ENST00000583327 HAMPP81172 84 aa8.5□□□□□ -1.05
ITGB4-209ENST00000583327 A0A0B4J2C4 111 aa8.49□□□□□ -1.05
ITGB4-209ENST00000583327 TMEM238LA0A1B0GVL6 79 aa8.49□□□□□ -1.05
ITGB4-209ENST00000583327 A6NJY4 79 aa8.49□□□□□ -1.05
ITGB4-209ENST00000583327 TRAV13-2A0A0B4J235 113 aa8.48□□□□□ -1.05
ITGB4-209ENST00000583327 TMEM126AQ9H061 195 aa8.48□□□□□ -1.05
ITGB4-209ENST00000583327 KCNQ1DNQ9H478 68 aa8.48□□□□□ -1.05
ITGB4-209ENST00000583327 TRBV10-3A0A0K0K1G6 114 aa8.47□□□□□ -1.05
ITGB4-209ENST00000583327 GAGE10A6NGK3 116 aa8.47□□□□□ -1.05
ITGB4-209ENST00000583327 M0R143 59 aa8.47□□□□□ -1.05
ITGB4-209ENST00000583327 HINT1P49773 126 aaPredicted RBP8.47□□□□□ -1.05
ITGB4-209ENST00000583327 HSPG2P98160 4391 aa8.46□□□□□ -1.05
ITGB4-209ENST00000583327 RPL37AP8A6NKH3 93 aa8.46□□□□□ -1.06
ITGB4-209ENST00000583327 SPRR1AP35321 89 aa8.46□□□□□ -1.06
ITGB4-209ENST00000583327 RYR1P21817 5038 aa8.46□□□□□ -1.06
ITGB4-209ENST00000583327 S100A7L2Q5SY68 101 aa8.45□□□□□ -1.06
ITGB4-209ENST00000583327 A6NDN8 102 aa8.44□□□□□ -1.06
ITGB4-209ENST00000583327 KRTAP4-16G5E9R7 235 aaPredicted RBP8.44□□□□□ -1.06
ITGB4-209ENST00000583327 NHP2Q9NX24 153 aaKnown RBP8.44□□□□□ -1.06
ITGB4-209ENST00000583327 PRO1854Q9UHT4 67 aa8.44□□□□□ -1.06
ITGB4-209ENST00000583327 PRYO14603 147 aa8.43□□□□□ -1.06
ITGB4-209ENST00000583327 OR13C6PQ8NH95 151 aa8.43□□□□□ -1.06
ITGB4-209ENST00000583327 KRTAP17-1Q9BYP8 105 aa8.43□□□□□ -1.06
ITGB4-209ENST00000583327 PSORS1C2Q9UIG4 136 aa8.43□□□□□ -1.06
ITGB4-209ENST00000583327 KIAA1109Q2LD37 5005 aa8.43□□□□□ -1.06
ITGB4-209ENST00000583327 BIRC6Q9NR09 4857 aa8.42□□□□□ -1.06
ITGB4-209ENST00000583327 KRTAP10-4P60372 401 aaPredicted RBP8.42□□□□□ -1.06
ITGB4-209ENST00000583327 UBE2BP63146 152 aa8.42□□□□□ -1.06
ITGB4-209ENST00000583327 RAB37Q96AX2 223 aa8.42□□□□□ -1.06
ITGB4-209ENST00000583327 CBY1Q9Y3M2 126 aa8.42□□□□□ -1.06
ITGB4-209ENST00000583327 FAT1Q14517 4588 aa8.41□□□□□ -1.06
ITGB4-209ENST00000583327 TRAV23DV6A0A075B6W5 121 aa8.41□□□□□ -1.06
ITGB4-209ENST00000583327 PCP4L1A6NKN8 68 aa8.41□□□□□ -1.06
ITGB4-209ENST00000583327 SMR3BP02814 79 aaPredicted RBP8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 88.7 ms