RNA–Protein interactions for RNA: ENST00000580556.5

CCDC84-209, Transcript of coiled-coil domain containing 84, humanhuman

TSL 3

Gene CCDC84, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC84-209ENST00000580556 SMIM6P0DI80 62 aa7.69□□□□□ -1.18
CCDC84-209ENST00000580556 SMIM13P0DJ93 91 aa7.69□□□□□ -1.18
CCDC84-209ENST00000580556 LINC00158P58513 81 aa7.69□□□□□ -1.18
CCDC84-209ENST00000580556 GAGE2EQ4V326 116 aa7.69□□□□□ -1.18
CCDC84-209ENST00000580556 SPATA45Q537H7 98 aa7.69□□□□□ -1.18
CCDC84-209ENST00000580556 TTTY13Q9BZ97 58 aa7.69□□□□□ -1.18
CCDC84-209ENST00000580556 GAGE2DQ9UEU5 116 aa7.69□□□□□ -1.18
CCDC84-209ENST00000580556 PLA2G2DQ9UNK4 145 aa7.69□□□□□ -1.18
CCDC84-209ENST00000580556 PAM16Q9Y3D7 125 aa7.69□□□□□ -1.18
CCDC84-209ENST00000580556 DLEU1O43261 78 aa7.68□□□□□ -1.18
CCDC84-209ENST00000580556 COX8AP10176 69 aa7.68□□□□□ -1.18
CCDC84-209ENST00000580556 C9orf129Q5T035 196 aaKnown RBP7.68□□□□□ -1.18
CCDC84-209ENST00000580556 BOD1L2Q8IYS8 172 aa7.68□□□□□ -1.18
CCDC84-209ENST00000580556 PLAC8Q9NZF1 115 aa7.68□□□□□ -1.18
CCDC84-209ENST00000580556 SCGB1D4Q6XE38 83 aa7.67□□□□□ -1.18
CCDC84-209ENST00000580556 SCXQ7RTU7 201 aa7.67□□□□□ -1.18
CCDC84-209ENST00000580556 MIR7-3HGQ8N6C7 128 aa7.67□□□□□ -1.18
CCDC84-209ENST00000580556 LITAFQ99732 161 aa7.67□□□□□ -1.18
CCDC84-209ENST00000580556 SND1-IT1Q9HBX3 110 aa7.67□□□□□ -1.18
CCDC84-209ENST00000580556 RNF213Q63HN8 5207 aa7.67□□□□□ -1.18
CCDC84-209ENST00000580556 A0A087WYN8 130 aa7.66□□□□□ -1.18
CCDC84-209ENST00000580556 LOC107984156A0A0G2JMH3 177 aa7.66□□□□□ -1.18
CCDC84-209ENST00000580556 TMEM238C9JI98 176 aa7.66□□□□□ -1.18
CCDC84-209ENST00000580556 S100A12P80511 92 aa7.66□□□□□ -1.18
CCDC84-209ENST00000580556 ARL17AQ8IVW1 177 aa7.66□□□□□ -1.18
CCDC84-209ENST00000580556 CIRBP-AS1Q8TBR5 109 aa7.66□□□□□ -1.18
CCDC84-209ENST00000580556 XAGE1AQ9HD64 81 aa7.66□□□□□ -1.18
CCDC84-209ENST00000580556 A0A0U1RRA0 63 aa7.65□□□□□ -1.18
CCDC84-209ENST00000580556 ADAMTSL4-AS1Q5T5F5 129 aa7.64□□□□□ -1.19
CCDC84-209ENST00000580556 Q6ZVH6 145 aa7.64□□□□□ -1.19
CCDC84-209ENST00000580556 DPH3Q96FX2 82 aa7.64□□□□□ -1.19
CCDC84-209ENST00000580556 SPANXDQ9BXN6 97 aa7.64□□□□□ -1.19
CCDC84-209ENST00000580556 PPDPFQ9H3Y8 114 aa7.64□□□□□ -1.19
CCDC84-209ENST00000580556 SPANXCQ9NY87 97 aa7.64□□□□□ -1.19
CCDC84-209ENST00000580556 IGLV5-37A0A075B6J1 123 aa7.63□□□□□ -1.19
CCDC84-209ENST00000580556 A0A1W2PNN7 141 aa7.63□□□□□ -1.19
CCDC84-209ENST00000580556 SLC25A34Q6PIV7 304 aa7.63□□□□□ -1.19
CCDC84-209ENST00000580556 COPS9Q8WXC6 57 aa7.63□□□□□ -1.19
CCDC84-209ENST00000580556 FAM168BA1KXE4 195 aa7.62□□□□□ -1.19
CCDC84-209ENST00000580556 PLA2G1BP04054 148 aaKnown RBP7.62□□□□□ -1.19
CCDC84-209ENST00000580556 RPL24P83731 157 aaKnown RBP7.62□□□□□ -1.19
CCDC84-209ENST00000580556 LINC00528Q8N1L1 170 aa7.62□□□□□ -1.19
CCDC84-209ENST00000580556 DAND5Q8N907 189 aa7.62□□□□□ -1.19
CCDC84-209ENST00000580556 C14orf144Q96I85 54 aa7.62□□□□□ -1.19
CCDC84-209ENST00000580556 MIEN1Q9BRT3 115 aa7.62□□□□□ -1.19
CCDC84-209ENST00000580556 SPANXB1Q9NS25 103 aaPredicted RBP7.62□□□□□ -1.19
CCDC84-209ENST00000580556 TP73-AS1Q9UF72 201 aa7.62□□□□□ -1.19
CCDC84-209ENST00000580556 PKHD1L1Q86WI1 4243 aa7.62□□□□□ -1.19
CCDC84-209ENST00000580556 LRP2P98164 4655 aa7.61□□□□□ -1.19
CCDC84-209ENST00000580556 IFITM1P13164 125 aa7.61□□□□□ -1.19
CCDC84-209ENST00000580556 FAM19A5Q7Z5A7 132 aaPredicted RBP7.61□□□□□ -1.19
CCDC84-209ENST00000580556 KRTAP7-1Q8IUC3 87 aa7.61□□□□□ -1.19
CCDC84-209ENST00000580556 HIGD1BQ9P298 99 aa7.61□□□□□ -1.19
CCDC84-209ENST00000580556 NDUFC2O95298 119 aa7.6□□□□□ -1.19
CCDC84-209ENST00000580556 VPREB1P12018 145 aa7.6□□□□□ -1.19
CCDC84-209ENST00000580556 LINC00308Q8TCZ7 52 aa7.6□□□□□ -1.19
CCDC84-209ENST00000580556 M0QXV9 152 aa7.59□□□□□ -1.19
CCDC84-209ENST00000580556 SOSTDC1Q6X4U4 206 aa7.59□□□□□ -1.19
CCDC84-209ENST00000580556 NKAPP1Q8N9T2 125 aa7.59□□□□□ -1.19
CCDC84-209ENST00000580556 C22orf24Q9Y442 160 aa7.59□□□□□ -1.19
CCDC84-209ENST00000580556 KRTAP10-4P60372 401 aaPredicted RBP7.58□□□□□ -1.2
CCDC84-209ENST00000580556 LBHQ53QV2 105 aaPredicted RBP7.58□□□□□ -1.2
CCDC84-209ENST00000580556 MRPL55Q7Z7F7 128 aaKnown RBP7.58□□□□□ -1.2
CCDC84-209ENST00000580556 Q8NDZ9 215 aa7.58□□□□□ -1.2
CCDC84-209ENST00000580556 UQCR10Q9UDW1 63 aa7.58□□□□□ -1.2
CCDC84-209ENST00000580556 TRBV10-2A0A0K0K1G8 114 aa7.57□□□□□ -1.2
CCDC84-209ENST00000580556 EIF4EBP3O60516 100 aaPredicted RBP7.57□□□□□ -1.2
CCDC84-209ENST00000580556 C2orf91Q6ZV80 131 aa7.57□□□□□ -1.2
CCDC84-209ENST00000580556 C7orf33Q8WU49 177 aa7.57□□□□□ -1.2
CCDC84-209ENST00000580556 C12orf57Q99622 126 aa7.57□□□□□ -1.2
CCDC84-209ENST00000580556 OXTP01178 125 aa7.56□□□□□ -1.2
CCDC84-209ENST00000580556 SRSF9Q13242 221 aaKnown RBP eCLIP7.56□□□□□ -1.2
CCDC84-209ENST00000580556 PHF5AQ7RTV0 110 aaKnown RBP7.56□□□□□ -1.2
CCDC84-209ENST00000580556 M0R378 163 aa7.55□□□□□ -1.2
CCDC84-209ENST00000580556 NPC2P61916 151 aa7.55□□□□□ -1.2
CCDC84-209ENST00000580556 TAL2Q16559 108 aa7.54□□□□□ -1.2
CCDC84-209ENST00000580556 MUSTN1Q8IVN3 82 aa7.54□□□□□ -1.2
CCDC84-209ENST00000580556 LINC00518Q8N0U6 118 aa7.54□□□□□ -1.2
CCDC84-209ENST00000580556 LINC00167Q96N53 147 aa7.54□□□□□ -1.2
CCDC84-209ENST00000580556 HIST1H4GQ99525 98 aa7.54□□□□□ -1.2
CCDC84-209ENST00000580556 NCR3O14931 201 aa7.52□□□□□ -1.21
CCDC84-209ENST00000580556 UBE2BP63146 152 aa7.52□□□□□ -1.21
CCDC84-209ENST00000580556 PRR3P79522 188 aaKnown RBP7.52□□□□□ -1.21
CCDC84-209ENST00000580556 TNXBP22105 4242 aa7.52□□□□□ -1.21
CCDC84-209ENST00000580556 IGLV1-50A0A075B6I6 118 aa7.51□□□□□ -1.21
CCDC84-209ENST00000580556 IGKV2-28A0A075B6P5 120 aa7.51□□□□□ -1.21
CCDC84-209ENST00000580556 TSTD3H0UI37 97 aa7.51□□□□□ -1.21
CCDC84-209ENST00000580556 IGKV2D-28P01615 120 aa7.51□□□□□ -1.21
CCDC84-209ENST00000580556 GAGE10A6NGK3 116 aa7.5□□□□□ -1.21
CCDC84-209ENST00000580556 IGLV6-57P01721 117 aa7.5□□□□□ -1.21
CCDC84-209ENST00000580556 HNRNPA3P51991 378 aaKnown RBP7.5□□□□□ -1.21
CCDC84-209ENST00000580556 HSD52Q0P140 79 aa7.5□□□□□ -1.21
CCDC84-209ENST00000580556 PRO1933Q9H354 126 aa7.5□□□□□ -1.21
CCDC84-209ENST00000580556 PSORS1C2Q9UIG4 136 aa7.5□□□□□ -1.21
CCDC84-209ENST00000580556 A4D1N5 150 aa7.49□□□□□ -1.21
CCDC84-209ENST00000580556 RPL37AP8A6NKH3 93 aa7.49□□□□□ -1.21
CCDC84-209ENST00000580556 DDTP30046 118 aa7.49□□□□□ -1.21
CCDC84-209ENST00000580556 RPL37AP61513 92 aaKnown RBP7.49□□□□□ -1.21
CCDC84-209ENST00000580556 KRTAP11-1Q8IUC1 163 aa7.49□□□□□ -1.21
CCDC84-209ENST00000580556 CEND1Q8N111 149 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms