RNA–Protein interactions for RNA: ENST00000579640.5

SS18-213, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,840 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-213ENST00000579640 XAGE1AQ9HD64 81 aa6.88□□□□□ -1.31
SS18-213ENST00000579640 DNAH11Q96DT5 4516 aa6.88□□□□□ -1.31
SS18-213ENST00000579640 NPC2P61916 151 aa6.87□□□□□ -1.31
SS18-213ENST00000579640 RPL24P83731 157 aaKnown RBP6.87□□□□□ -1.31
SS18-213ENST00000579640 LINC01620Q4KN68 170 aa6.87□□□□□ -1.31
SS18-213ENST00000579640 IGKV2-24A0A0C4DH68 120 aa6.87□□□□□ -1.31
SS18-213ENST00000579640 CTAG1AP78358 180 aa6.87□□□□□ -1.31
SS18-213ENST00000579640 C9orf129Q5T035 196 aaKnown RBP6.87□□□□□ -1.31
SS18-213ENST00000579640 SOSTDC1Q6X4U4 206 aa6.87□□□□□ -1.31
SS18-213ENST00000579640 CEND1Q8N111 149 aa6.87□□□□□ -1.31
SS18-213ENST00000579640 NDUFC2O95298 119 aa6.86□□□□□ -1.31
SS18-213ENST00000579640 PLA2G2DQ9UNK4 145 aa6.86□□□□□ -1.31
SS18-213ENST00000579640 RYR3Q15413 4870 aa6.86□□□□□ -1.31
SS18-213ENST00000579640 M0R143 59 aa6.85□□□□□ -1.31
SS18-213ENST00000579640 PKD1P98161 4303 aa6.85□□□□□ -1.31
SS18-213ENST00000579640 TMEM238LA0A1B0GVL6 79 aa6.85□□□□□ -1.31
SS18-213ENST00000579640 A6NJY4 79 aa6.85□□□□□ -1.31
SS18-213ENST00000579640 EIF4EBP3O60516 100 aaPredicted RBP6.85□□□□□ -1.31
SS18-213ENST00000579640 SPACA4Q8TDM5 124 aa6.85□□□□□ -1.31
SS18-213ENST00000579640 CHTF8P0CG12 524 aa6.84□□□□□ -1.31
SS18-213ENST00000579640 A4D1N5 150 aa6.83□□□□□ -1.32
SS18-213ENST00000579640 IGLV5-37A0A075B6J1 123 aa6.83□□□□□ -1.32
SS18-213ENST00000579640 PCP4L1A6NKN8 68 aa6.83□□□□□ -1.32
SS18-213ENST00000579640 VPREB1P12018 145 aa6.83□□□□□ -1.32
SS18-213ENST00000579640 KRTAP10-1P60331 282 aa6.83□□□□□ -1.32
SS18-213ENST00000579640 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.83□□□□□ -1.32
SS18-213ENST00000579640 DNAH5Q8TE73 4624 aa6.83□□□□□ -1.32
SS18-213ENST00000579640 TRBV10-2A0A0K0K1G8 114 aa6.82□□□□□ -1.32
SS18-213ENST00000579640 FXYD2P54710 66 aa6.82□□□□□ -1.32
SS18-213ENST00000579640 BVES-AS1Q5T3Y7 98 aa6.82□□□□□ -1.32
SS18-213ENST00000579640 Q6ZSA8 131 aa6.82□□□□□ -1.32
SS18-213ENST00000579640 NKAPP1Q8N9T2 125 aa6.82□□□□□ -1.32
SS18-213ENST00000579640 DPH3Q96FX2 82 aa6.82□□□□□ -1.32
SS18-213ENST00000579640 PANO1I0J062 215 aa6.81□□□□□ -1.32
SS18-213ENST00000579640 HINT1P49773 126 aaPredicted RBP6.81□□□□□ -1.32
SS18-213ENST00000579640 SERTAD4-AS1Q5TG53 156 aa6.81□□□□□ -1.32
SS18-213ENST00000579640 FAM168BA1KXE4 195 aa6.8□□□□□ -1.32
SS18-213ENST00000579640 FAM19A5Q7Z5A7 132 aaPredicted RBP6.8□□□□□ -1.32
SS18-213ENST00000579640 Q8NDZ9 215 aa6.8□□□□□ -1.32
SS18-213ENST00000579640 A0A1W2PNN7 141 aa6.8□□□□□ -1.32
SS18-213ENST00000579640 EPM2AB3EWF7 344 aa6.8□□□□□ -1.32
SS18-213ENST00000579640 M0R378 163 aa6.8□□□□□ -1.32
SS18-213ENST00000579640 PLAC8Q9NZF1 115 aa6.8□□□□□ -1.32
SS18-213ENST00000579640 IGKV2-28A0A075B6P5 120 aa6.79□□□□□ -1.32
SS18-213ENST00000579640 A0A087WYN8 130 aa6.79□□□□□ -1.32
SS18-213ENST00000579640 TRAV13-2A0A0B4J235 113 aa6.79□□□□□ -1.32
SS18-213ENST00000579640 A0A0B4J2C4 111 aa6.79□□□□□ -1.32
SS18-213ENST00000579640 A6NDN8 102 aa6.79□□□□□ -1.32
SS18-213ENST00000579640 NCR3O14931 201 aa6.79□□□□□ -1.32
SS18-213ENST00000579640 IGKV2D-28P01615 120 aa6.79□□□□□ -1.32
SS18-213ENST00000579640 LBHQ53QV2 105 aaPredicted RBP6.79□□□□□ -1.32
SS18-213ENST00000579640 KRTAP7-1Q8IUC3 87 aa6.79□□□□□ -1.32
SS18-213ENST00000579640 C22orf24Q9Y442 160 aa6.79□□□□□ -1.32
SS18-213ENST00000579640 M0QXV9 152 aa6.78□□□□□ -1.32
SS18-213ENST00000579640 CFC1BP0CG36 223 aa6.78□□□□□ -1.32
SS18-213ENST00000579640 CFC1P0CG37 223 aa6.78□□□□□ -1.32
SS18-213ENST00000579640 PRR3P79522 188 aaKnown RBP6.78□□□□□ -1.32
SS18-213ENST00000579640 RAB37Q96AX2 223 aa6.78□□□□□ -1.32
SS18-213ENST00000579640 NHP2Q9NX24 153 aaKnown RBP6.78□□□□□ -1.32
SS18-213ENST00000579640 FAM30AQ9NZY2 134 aa6.78□□□□□ -1.32
SS18-213ENST00000579640 DNAH8Q96JB1 4490 aa6.78□□□□□ -1.32
SS18-213ENST00000579640 A0A1B0GWB2 263 aa6.78□□□□□ -1.32
SS18-213ENST00000579640 MRPL55Q7Z7F7 128 aaKnown RBP6.78□□□□□ -1.32
SS18-213ENST00000579640 S100A7L2Q5SY68 101 aa6.77□□□□□ -1.33
SS18-213ENST00000579640 LINC00337Q8N6G1 96 aa6.77□□□□□ -1.33
SS18-213ENST00000579640 C7orf33Q8WU49 177 aa6.77□□□□□ -1.33
SS18-213ENST00000579640 TMEM126AQ9H061 195 aa6.77□□□□□ -1.33
SS18-213ENST00000579640 CBY1Q9Y3M2 126 aa6.77□□□□□ -1.33
SS18-213ENST00000579640 BATFQ16520 125 aa6.76□□□□□ -1.33
SS18-213ENST00000579640 IGLV6-57P01721 117 aa6.76□□□□□ -1.33
SS18-213ENST00000579640 SCXQ7RTU7 201 aa6.76□□□□□ -1.33
SS18-213ENST00000579640 OR13C6PQ8NH95 151 aa6.76□□□□□ -1.33
SS18-213ENST00000579640 CIRBP-AS1Q8TBR5 109 aa6.76□□□□□ -1.33
SS18-213ENST00000579640 LINC00167Q96N53 147 aa6.76□□□□□ -1.33
SS18-213ENST00000579640 PRO1854Q9UHT4 67 aa6.76□□□□□ -1.33
SS18-213ENST00000579640 SNHG12Q9BXW3 62 aa6.75□□□□□ -1.33
SS18-213ENST00000579640 TRBV10-3A0A0K0K1G6 114 aa6.74□□□□□ -1.33
SS18-213ENST00000579640 GAGE10A6NGK3 116 aa6.74□□□□□ -1.33
SS18-213ENST00000579640 RPL13AP40429 203 aaKnown RBP6.74□□□□□ -1.33
SS18-213ENST00000579640 PHF5AQ7RTV0 110 aaKnown RBP6.74□□□□□ -1.33
SS18-213ENST00000579640 DYNC1H1Q14204 4646 aaKnown RBP6.74□□□□□ -1.33
SS18-213ENST00000579640 IGLV1-50A0A075B6I6 118 aa6.73□□□□□ -1.33
SS18-213ENST00000579640 K7ERJ3 54 aa6.73□□□□□ -1.33
SS18-213ENST00000579640 UBE2BP63146 152 aa6.73□□□□□ -1.33
SS18-213ENST00000579640 PKHD1P08F94 4074 aa6.73□□□□□ -1.33
SS18-213ENST00000579640 LRP1BQ9NZR2 4599 aa6.72□□□□□ -1.33
SS18-213ENST00000579640 PRYO14603 147 aa6.72□□□□□ -1.33
SS18-213ENST00000579640 KCNQ1DNQ9H478 68 aa6.72□□□□□ -1.33
SS18-213ENST00000579640 TRAV23DV6A0A075B6W5 121 aa6.71□□□□□ -1.33
SS18-213ENST00000579640 RPL37AP8A6NKH3 93 aa6.71□□□□□ -1.33
SS18-213ENST00000579640 Q1RN00 199 aa6.71□□□□□ -1.34
SS18-213ENST00000579640 COL5A1-AS1Q5SY13 56 aa6.71□□□□□ -1.34
SS18-213ENST00000579640 H7C2G1 150 aa6.7□□□□□ -1.34
SS18-213ENST00000579640 RPL28P46779 137 aaKnown RBP6.7□□□□□ -1.34
SS18-213ENST00000579640 XGP55808 180 aa6.7□□□□□ -1.34
SS18-213ENST00000579640 SMIM11BQ8TCY0 68 aa6.69□□□□□ -1.34
SS18-213ENST00000579640 ZNF73O43830 326 aaPredicted RBP6.69□□□□□ -1.34
SS18-213ENST00000579640 CDK2AP2O75956 126 aa6.69□□□□□ -1.34
SS18-213ENST00000579640 TSPAN13O95857 204 aa6.69□□□□□ -1.34
SS18-213ENST00000579640 HAMPP81172 84 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms