RNA–Protein interactions for RNA: ENST00000578692.1

CRLF3-203, Transcript of cytokine receptor like factor 3, humanhuman

TSL 2

Gene CRLF3, Length 1,392 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-203ENST00000578692 ANAPC11Q9NYG5 84 aa9.37□□□□□ -0.91
CRLF3-203ENST00000578692 CHTOPQ9Y3Y2 248 aaKnown RBP9.37□□□□□ -0.91
CRLF3-203ENST00000578692 YPEL4Q96NS1 127 aa9.35□□□□□ -0.91
CRLF3-203ENST00000578692 CHCHD1Q96BP2 118 aaKnown RBP9.34□□□□□ -0.91
CRLF3-203ENST00000578692 TMEM126AQ9H061 195 aa9.34□□□□□ -0.91
CRLF3-203ENST00000578692 FAM19A1Q7Z5A9 133 aa9.33□□□□□ -0.92
CRLF3-203ENST00000578692 IFI27L1Q96BM0 104 aa9.33□□□□□ -0.92
CRLF3-203ENST00000578692 TRAV12-1A0A0B4J245 112 aa9.32□□□□□ -0.92
CRLF3-203ENST00000578692 TMEM223A0PJW6 202 aa9.32□□□□□ -0.92
CRLF3-203ENST00000578692 TMEM238C9JI98 176 aa9.32□□□□□ -0.92
CRLF3-203ENST00000578692 LINC00158P58513 81 aa9.32□□□□□ -0.92
CRLF3-203ENST00000578692 PRLHP81277 87 aa9.32□□□□□ -0.92
CRLF3-203ENST00000578692 Q8NDZ9 215 aa9.32□□□□□ -0.92
CRLF3-203ENST00000578692 FAM229BQ4G0N7 80 aa9.31□□□□□ -0.92
CRLF3-203ENST00000578692 KRTAP13-2Q52LG2 175 aa9.31□□□□□ -0.92
CRLF3-203ENST00000578692 A0A0U1RRA0 63 aa9.3□□□□□ -0.92
CRLF3-203ENST00000578692 M0R378 163 aa9.3□□□□□ -0.92
CRLF3-203ENST00000578692 IGKV2D-26A0A0A0MRZ7 120 aa9.27□□□□□ -0.93
CRLF3-203ENST00000578692 ATP6V1G1O75348 118 aa9.27□□□□□ -0.93
CRLF3-203ENST00000578692 FAM19A2Q8N3H0 131 aa9.27□□□□□ -0.93
CRLF3-203ENST00000578692 HSBP1O75506 76 aa9.26□□□□□ -0.93
CRLF3-203ENST00000578692 CBLN2Q8IUK8 224 aa9.26□□□□□ -0.93
CRLF3-203ENST00000578692 PLEKHB2Q96CS7 222 aa9.26□□□□□ -0.93
CRLF3-203ENST00000578692 SMIM13P0DJ93 91 aa9.25□□□□□ -0.93
CRLF3-203ENST00000578692 SLC7A5P1Q8MH63 180 aa9.25□□□□□ -0.93
CRLF3-203ENST00000578692 LINC00304Q8N9R0 145 aa9.25□□□□□ -0.93
CRLF3-203ENST00000578692 MEIG1Q5JSS6 88 aa9.24□□□□□ -0.93
CRLF3-203ENST00000578692 HERV-K104P63124 156 aa9.24□□□□□ -0.93
CRLF3-203ENST00000578692 HIGD2AQ9BW72 106 aa9.24□□□□□ -0.93
CRLF3-203ENST00000578692 LINC00587B1AMM8 73 aa9.23□□□□□ -0.93
CRLF3-203ENST00000578692 BOD1L2Q8IYS8 172 aa9.23□□□□□ -0.93
CRLF3-203ENST00000578692 MIR7-3HGQ8N6C7 128 aa9.23□□□□□ -0.93
CRLF3-203ENST00000578692 H0Y8G0 127 aa9.22□□□□□ -0.93
CRLF3-203ENST00000578692 TRGC2P03986 189 aa9.22□□□□□ -0.93
CRLF3-203ENST00000578692 NDUFA12Q9UI09 145 aa9.22□□□□□ -0.93
CRLF3-203ENST00000578692 MYMXA0A1B0GTQ4 84 aa9.21□□□□□ -0.94
CRLF3-203ENST00000578692 LEPROTL1O95214 131 aa9.2□□□□□ -0.94
CRLF3-203ENST00000578692 CTAG1AP78358 180 aa9.2□□□□□ -0.94
CRLF3-203ENST00000578692 C3orf22Q8N5N4 141 aa9.2□□□□□ -0.94
CRLF3-203ENST00000578692 RETNLBQ9BQ08 111 aa9.2□□□□□ -0.94
CRLF3-203ENST00000578692 PRYO14603 147 aa9.19□□□□□ -0.94
CRLF3-203ENST00000578692 NCR3O14931 201 aa9.19□□□□□ -0.94
CRLF3-203ENST00000578692 MAP1LC3CQ9BXW4 147 aa9.19□□□□□ -0.94
CRLF3-203ENST00000578692 SERF1AO75920 110 aa9.18□□□□□ -0.94
CRLF3-203ENST00000578692 SPRR4Q96PI1 79 aa9.18□□□□□ -0.94
CRLF3-203ENST00000578692 KCNQ1DNQ9H478 68 aa9.18□□□□□ -0.94
CRLF3-203ENST00000578692 LEPROTO15243 131 aa9.17□□□□□ -0.94
CRLF3-203ENST00000578692 LINC00337Q8N6G1 96 aa9.17□□□□□ -0.94
CRLF3-203ENST00000578692 SPRR1AP35321 89 aa9.16□□□□□ -0.94
CRLF3-203ENST00000578692 LINC00310P59036 64 aa9.16□□□□□ -0.94
CRLF3-203ENST00000578692 ZNF706Q9Y5V0 76 aaPredicted RBP9.16□□□□□ -0.94
CRLF3-203ENST00000578692 PLNP26678 52 aa9.15□□□□□ -0.94
CRLF3-203ENST00000578692 TSPEAR-AS2P59090 65 aa9.15□□□□□ -0.94
CRLF3-203ENST00000578692 SMCR5Q8TEV8 140 aa9.15□□□□□ -0.94
CRLF3-203ENST00000578692 TRBV10-3A0A0K0K1G6 114 aa9.14□□□□□ -0.95
CRLF3-203ENST00000578692 ETDCA0A1B0GVM5 59 aa9.14□□□□□ -0.95
CRLF3-203ENST00000578692 FABP4P15090 132 aa9.14□□□□□ -0.95
CRLF3-203ENST00000578692 HSPB8Q9UJY1 196 aa9.14□□□□□ -0.95
CRLF3-203ENST00000578692 LOC107984156A0A0G2JMH3 177 aa9.13□□□□□ -0.95
CRLF3-203ENST00000578692 KRTAP4-16G5E9R7 235 aaPredicted RBP9.13□□□□□ -0.95
CRLF3-203ENST00000578692 S100A12P80511 92 aa9.13□□□□□ -0.95
CRLF3-203ENST00000578692 SPAG11AQ6PDA7 123 aa9.13□□□□□ -0.95
CRLF3-203ENST00000578692 ARL17AQ8IVW1 177 aa9.13□□□□□ -0.95
CRLF3-203ENST00000578692 DAND5Q8N907 189 aa9.13□□□□□ -0.95
CRLF3-203ENST00000578692 IGLV7-46A0A075B6I9 117 aa9.12□□□□□ -0.95
CRLF3-203ENST00000578692 J3QQQ9 107 aa9.12□□□□□ -0.95
CRLF3-203ENST00000578692 DPM2O94777 84 aa9.12□□□□□ -0.95
CRLF3-203ENST00000578692 PMCHL2Q9BQD1 86 aa9.12□□□□□ -0.95
CRLF3-203ENST00000578692 MUC2Q02817 5179 aa9.12□□□□□ -0.95
CRLF3-203ENST00000578692 COLCA2A8K830 154 aa9.12□□□□□ -0.95
CRLF3-203ENST00000578692 IGKCP01834 107 aa9.12□□□□□ -0.95
CRLF3-203ENST00000578692 HERVK_113P61574 105 aa9.12□□□□□ -0.95
CRLF3-203ENST00000578692 C4orf48Q5BLP8 95 aa9.12□□□□□ -0.95
CRLF3-203ENST00000578692 KRTAP4-8Q9BYQ9 185 aa9.12□□□□□ -0.95
CRLF3-203ENST00000578692 NMUP48645 174 aa9.11□□□□□ -0.95
CRLF3-203ENST00000578692 TPRXLQ17RH7 258 aa9.11□□□□□ -0.95
CRLF3-203ENST00000578692 CDIP1Q9H305 208 aa9.11□□□□□ -0.95
CRLF3-203ENST00000578692 PPDPFQ9H3Y8 114 aa9.11□□□□□ -0.95
CRLF3-203ENST00000578692 TRBV10-2A0A0K0K1G8 114 aa9.1□□□□□ -0.95
CRLF3-203ENST00000578692 A0A0U1RQV1 116 aa9.1□□□□□ -0.95
CRLF3-203ENST00000578692 LGALS3P17931 250 aaKnown RBP9.1□□□□□ -0.95
CRLF3-203ENST00000578692 DDTP30046 118 aa9.1□□□□□ -0.95
CRLF3-203ENST00000578692 B5MCH6 92 aa9.09□□□□□ -0.95
CRLF3-203ENST00000578692 MIEN1Q9BRT3 115 aa9.09□□□□□ -0.95
CRLF3-203ENST00000578692 Q8NBF4 154 aa9.07□□□□□ -0.96
CRLF3-203ENST00000578692 SPANXB1Q9NS25 103 aaPredicted RBP9.07□□□□□ -0.96
CRLF3-203ENST00000578692 NDUFC2O95298 119 aa9.06□□□□□ -0.96
CRLF3-203ENST00000578692 LINC00483Q53H64 154 aa9.06□□□□□ -0.96
CRLF3-203ENST00000578692 GAGE2AQ6NT46 116 aa9.06□□□□□ -0.96
CRLF3-203ENST00000578692 ERC2-IT1O76042 136 aa9.05□□□□□ -0.96
CRLF3-203ENST00000578692 S100A7L2Q5SY68 101 aa9.05□□□□□ -0.96
CRLF3-203ENST00000578692 A0A0J9YXY3 114 aa9.03□□□□□ -0.96
CRLF3-203ENST00000578692 E9PLD3 99 aa9.03□□□□□ -0.96
CRLF3-203ENST00000578692 SPINK1P00995 79 aa9.03□□□□□ -0.96
CRLF3-203ENST00000578692 IGLV6-57P01721 117 aa9.03□□□□□ -0.96
CRLF3-203ENST00000578692 FP248Q71RG6 208 aaPredicted RBP9.03□□□□□ -0.96
CRLF3-203ENST00000578692 Q9BRP9 147 aa9.03□□□□□ -0.96
CRLF3-203ENST00000578692 NPC2P61916 151 aa9.02□□□□□ -0.97
CRLF3-203ENST00000578692 ADAMTSL4-AS1Q5T5F5 129 aa9.02□□□□□ -0.97
CRLF3-203ENST00000578692 LCE2CQ5TA81 110 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 144.4 ms