RNA–Protein interactions for RNA: ENST00000578314.1

VAPA-205, Transcript of VAMP associated protein A, humanhuman

TSL 3

Gene VAPA, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-205ENST00000578314 LINC00158P58513 81 aa13.66□□□□□ -0.22
VAPA-205ENST00000578314 Q8NDZ9 215 aa13.66□□□□□ -0.22
VAPA-205ENST00000578314 LEPROTL1O95214 131 aa13.65□□□□□ -0.22
VAPA-205ENST00000578314 UBE2AP49459 152 aa13.64□□□□□ -0.23
VAPA-205ENST00000578314 H0Y8G0 127 aa13.61□□□□□ -0.23
VAPA-205ENST00000578314 HERV-K104P63124 156 aa13.61□□□□□ -0.23
VAPA-205ENST00000578314 TMEM126AQ9H061 195 aa13.61□□□□□ -0.23
VAPA-205ENST00000578314 A0A0U1RRA0 63 aa13.6□□□□□ -0.23
VAPA-205ENST00000578314 A0A087X002 238 aa13.59□□□□□ -0.23
VAPA-205ENST00000578314 TMEM238C9JI98 176 aa13.59□□□□□ -0.23
VAPA-205ENST00000578314 SMIM13P0DJ93 91 aa13.59□□□□□ -0.23
VAPA-205ENST00000578314 HSPB8Q9UJY1 196 aa13.59□□□□□ -0.23
VAPA-205ENST00000578314 M0R378 163 aa13.58□□□□□ -0.24
VAPA-205ENST00000578314 CRYGAP11844 174 aa13.58□□□□□ -0.24
VAPA-205ENST00000578314 NDUFA12Q9UI09 145 aa13.58□□□□□ -0.24
VAPA-205ENST00000578314 LINC00587B1AMM8 73 aa13.57□□□□□ -0.24
VAPA-205ENST00000578314 ATP6V1G1O75348 118 aa13.57□□□□□ -0.24
VAPA-205ENST00000578314 PLNP26678 52 aa13.57□□□□□ -0.24
VAPA-205ENST00000578314 LPAP08519 4548 aa13.57□□□□□ -0.24
VAPA-205ENST00000578314 MYMXA0A1B0GTQ4 84 aa13.56□□□□□ -0.24
VAPA-205ENST00000578314 FABP4P15090 132 aa13.56□□□□□ -0.24
VAPA-205ENST00000578314 MEIG1Q5JSS6 88 aa13.56□□□□□ -0.24
VAPA-205ENST00000578314 FAM19A1Q7Z5A9 133 aa13.56□□□□□ -0.24
VAPA-205ENST00000578314 MIR7-3HGQ8N6C7 128 aa13.55□□□□□ -0.24
VAPA-205ENST00000578314 ANAPC11Q9NYG5 84 aa13.55□□□□□ -0.24
VAPA-205ENST00000578314 LEPROTO15243 131 aa13.54□□□□□ -0.24
VAPA-205ENST00000578314 PRLHP81277 87 aa13.54□□□□□ -0.24
VAPA-205ENST00000578314 TSPEAR-AS2P59090 65 aa13.53□□□□□ -0.24
VAPA-205ENST00000578314 FAM229BQ4G0N7 80 aa13.53□□□□□ -0.24
VAPA-205ENST00000578314 PLEKHB2Q96CS7 222 aa13.53□□□□□ -0.24
VAPA-205ENST00000578314 DPM2O94777 84 aa13.52□□□□□ -0.25
VAPA-205ENST00000578314 BOD1L2Q8IYS8 172 aa13.52□□□□□ -0.25
VAPA-205ENST00000578314 TYMSOSQ8TAI1 123 aa13.52□□□□□ -0.25
VAPA-205ENST00000578314 MAP1LC3CQ9BXW4 147 aa13.51□□□□□ -0.25
VAPA-205ENST00000578314 KRTAP13-2Q52LG2 175 aa13.5□□□□□ -0.25
VAPA-205ENST00000578314 PMCHL2Q9BQD1 86 aa13.5□□□□□ -0.25
VAPA-205ENST00000578314 IGKCP01834 107 aa13.49□□□□□ -0.25
VAPA-205ENST00000578314 IGKV2D-26A0A0A0MRZ7 120 aa13.48□□□□□ -0.25
VAPA-205ENST00000578314 J3QQQ9 107 aa13.48□□□□□ -0.25
VAPA-205ENST00000578314 HERVK_113P61574 105 aa13.48□□□□□ -0.25
VAPA-205ENST00000578314 LOC107984156A0A0G2JMH3 177 aa13.47□□□□□ -0.25
VAPA-205ENST00000578314 ARL17AQ8IVW1 177 aa13.47□□□□□ -0.25
VAPA-205ENST00000578314 NMUP48645 174 aa13.46□□□□□ -0.25
VAPA-205ENST00000578314 HIST1H2BKO60814 126 aa13.45□□□□□ -0.26
VAPA-205ENST00000578314 TSPAN13O95857 204 aa13.45□□□□□ -0.26
VAPA-205ENST00000578314 HIST1H2BJP06899 126 aa13.45□□□□□ -0.26
VAPA-205ENST00000578314 HIST1H2BOP23527 126 aa13.45□□□□□ -0.26
VAPA-205ENST00000578314 HIST1H2BBP33778 126 aa13.45□□□□□ -0.26
VAPA-205ENST00000578314 HIST1H2BDP58876 126 aa13.45□□□□□ -0.26
VAPA-205ENST00000578314 HIST1H2BCP62807 126 aa13.45□□□□□ -0.26
VAPA-205ENST00000578314 HIST2H2BEQ16778 126 aa13.45□□□□□ -0.26
VAPA-205ENST00000578314 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.45□□□□□ -0.26
VAPA-205ENST00000578314 HIST1H2BHQ93079 126 aa13.45□□□□□ -0.26
VAPA-205ENST00000578314 HIST1H2BNQ99877 126 aa13.45□□□□□ -0.26
VAPA-205ENST00000578314 HIST1H2BMQ99879 126 aa13.45□□□□□ -0.26
VAPA-205ENST00000578314 KCNQ1DNQ9H478 68 aa13.45□□□□□ -0.26
VAPA-205ENST00000578314 PRYO14603 147 aa13.44□□□□□ -0.26
VAPA-205ENST00000578314 NCR3O14931 201 aa13.44□□□□□ -0.26
VAPA-205ENST00000578314 LGALS3P17931 250 aaKnown RBP13.43□□□□□ -0.26
VAPA-205ENST00000578314 SPRR1AP35321 89 aa13.43□□□□□ -0.26
VAPA-205ENST00000578314 PRR4Q16378 134 aa13.43□□□□□ -0.26
VAPA-205ENST00000578314 HIGD2AQ9BW72 106 aa13.43□□□□□ -0.26
VAPA-205ENST00000578314 LINC00337Q8N6G1 96 aa13.42□□□□□ -0.26
VAPA-205ENST00000578314 DAND5Q8N907 189 aa13.42□□□□□ -0.26
VAPA-205ENST00000578314 TRBV10-3A0A0K0K1G6 114 aa13.4□□□□□ -0.26
VAPA-205ENST00000578314 KRTAP4-16G5E9R7 235 aaPredicted RBP13.39□□□□□ -0.27
VAPA-205ENST00000578314 SYS1-DBNDD2H3BUS1 97 aa13.39□□□□□ -0.27
VAPA-205ENST00000578314 TRBV10-2A0A0K0K1G8 114 aa13.38□□□□□ -0.27
VAPA-205ENST00000578314 E9PLD3 99 aa13.38□□□□□ -0.27
VAPA-205ENST00000578314 SPRR4Q96PI1 79 aa13.37□□□□□ -0.27
VAPA-205ENST00000578314 LINC00304Q8N9R0 145 aa13.36□□□□□ -0.27
VAPA-205ENST00000578314 A0A0J9YXY3 114 aa13.34□□□□□ -0.27
VAPA-205ENST00000578314 ETDCA0A1B0GVM5 59 aa13.34□□□□□ -0.27
VAPA-205ENST00000578314 NDUFC2O95298 119 aa13.34□□□□□ -0.27
VAPA-205ENST00000578314 CTAG1AP78358 180 aa13.34□□□□□ -0.27
VAPA-205ENST00000578314 S100A12P80511 92 aa13.34□□□□□ -0.27
VAPA-205ENST00000578314 ZNF706Q9Y5V0 76 aaPredicted RBP13.34□□□□□ -0.27
VAPA-205ENST00000578314 LINC01545Q5VT33 79 aa13.33□□□□□ -0.28
VAPA-205ENST00000578314 PET117Q6UWS5 81 aa13.33□□□□□ -0.28
VAPA-205ENST00000578314 SMCR5Q8TEV8 140 aa13.33□□□□□ -0.28
VAPA-205ENST00000578314 MIEN1Q9BRT3 115 aa13.33□□□□□ -0.28
VAPA-205ENST00000578314 SPANXB1Q9NS25 103 aaPredicted RBP13.33□□□□□ -0.28
VAPA-205ENST00000578314 DDTP30046 118 aa13.32□□□□□ -0.28
VAPA-205ENST00000578314 ADAMTSL4-AS1Q5T5F5 129 aa13.32□□□□□ -0.28
VAPA-205ENST00000578314 C3orf22Q8N5N4 141 aa13.32□□□□□ -0.28
VAPA-205ENST00000578314 COA6Q5JTJ3 125 aaKnown RBP13.31□□□□□ -0.28
VAPA-205ENST00000578314 B5MCH6 92 aa13.3□□□□□ -0.28
VAPA-205ENST00000578314 SOSTDC1Q6X4U4 206 aa13.3□□□□□ -0.28
VAPA-205ENST00000578314 IGLV6-57P01721 117 aa13.29□□□□□ -0.28
VAPA-205ENST00000578314 EIF4EBP3O60516 100 aaPredicted RBP13.28□□□□□ -0.28
VAPA-205ENST00000578314 C3orf79P0CE67 100 aa13.26□□□□□ -0.29
VAPA-205ENST00000578314 S100A7L2Q5SY68 101 aa13.26□□□□□ -0.29
VAPA-205ENST00000578314 LITAFQ99732 161 aa13.26□□□□□ -0.29
VAPA-205ENST00000578314 TIMM17BO60830 172 aa13.24□□□□□ -0.29
VAPA-205ENST00000578314 NPC2P61916 151 aa13.24□□□□□ -0.29
VAPA-205ENST00000578314 LINC00483Q53H64 154 aa13.24□□□□□ -0.29
VAPA-205ENST00000578314 SPAG11AQ6PDA7 123 aa13.23□□□□□ -0.29
VAPA-205ENST00000578314 MUC2Q02817 5179 aa13.23□□□□□ -0.29
VAPA-205ENST00000578314 ERC2-IT1O76042 136 aa13.22□□□□□ -0.29
VAPA-205ENST00000578314 Q6ZRX8 168 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms