RNA–Protein interactions for RNA: ENST00000578049.3

SEC22B-201, Transcript of SEC22 homolog B, vesicle trafficking protein (gene/pseudogene), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC22B, Length 6,922 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22B-201ENST00000578049 MUC4Q99102 2169 aa7.42□□□□□ -1.22
SEC22B-201ENST00000578049 C6orf48Q9UBA6 75 aa7.41□□□□□ -1.22
SEC22B-201ENST00000578049 LRRK2Q5S007 2527 aa7.41□□□□□ -1.22
SEC22B-201ENST00000578049 RETNQ9HD89 108 aa7.41□□□□□ -1.22
SEC22B-201ENST00000578049 ACYP2P14621 99 aa7.4□□□□□ -1.22
SEC22B-201ENST00000578049 CIRBP-AS1Q8TBR5 109 aa7.4□□□□□ -1.22
SEC22B-201ENST00000578049 Q6ZRX8 168 aa7.39□□□□□ -1.23
SEC22B-201ENST00000578049 C4orf26Q17RF5 130 aa7.39□□□□□ -1.23
SEC22B-201ENST00000578049 LINC00167Q96N53 147 aa7.38□□□□□ -1.23
SEC22B-201ENST00000578049 TRAV22A0A0B4J277 110 aa7.38□□□□□ -1.23
SEC22B-201ENST00000578049 KLKP1Q107X0 134 aa7.38□□□□□ -1.23
SEC22B-201ENST00000578049 TRBV7-4A0A0J9YYF1 115 aa7.38□□□□□ -1.23
SEC22B-201ENST00000578049 CYP4F30PQ9H0H9 118 aa7.38□□□□□ -1.23
SEC22B-201ENST00000578049 WDR87Q6ZQQ6 2873 aa7.38□□□□□ -1.23
SEC22B-201ENST00000578049 PRLHP81277 87 aa7.37□□□□□ -1.23
SEC22B-201ENST00000578049 A0A1B0GU69 56 aa7.36□□□□□ -1.23
SEC22B-201ENST00000578049 M0R2N4 97 aa7.36□□□□□ -1.23
SEC22B-201ENST00000578049 KRTAP10-9P60411 292 aa7.36□□□□□ -1.23
SEC22B-201ENST00000578049 IGLV6-57P01721 117 aa7.36□□□□□ -1.23
SEC22B-201ENST00000578049 MTORP42345 2549 aa7.36□□□□□ -1.23
SEC22B-201ENST00000578049 IGLV5-52A0A0A0MRZ9 124 aa7.35□□□□□ -1.23
SEC22B-201ENST00000578049 TM2D3Q9BRN9 247 aa7.35□□□□□ -1.23
SEC22B-201ENST00000578049 DEFB116Q30KQ4 102 aa7.35□□□□□ -1.23
SEC22B-201ENST00000578049 MOBPQ13875 183 aa7.35□□□□□ -1.23
SEC22B-201ENST00000578049 X6R8D5 127 aa7.34□□□□□ -1.24
SEC22B-201ENST00000578049 NHLRC4P0CG21 123 aaPredicted RBP7.33□□□□□ -1.24
SEC22B-201ENST00000578049 LINC00476Q8WZB0 136 aa7.33□□□□□ -1.24
SEC22B-201ENST00000578049 LOC101927531A0A1B0GV80 90 aa7.32□□□□□ -1.24
SEC22B-201ENST00000578049 PLA2G2AP14555 144 aa7.32□□□□□ -1.24
SEC22B-201ENST00000578049 LY6G6CO95867 125 aa7.32□□□□□ -1.24
SEC22B-201ENST00000578049 SPAG11AQ6PDA7 123 aa7.31□□□□□ -1.24
SEC22B-201ENST00000578049 LINC01600Q96MT4 127 aa7.31□□□□□ -1.24
SEC22B-201ENST00000578049 Q9UF83 564 aa7.3□□□□□ -1.24
SEC22B-201ENST00000578049 VPREB1P12018 145 aa7.3□□□□□ -1.24
SEC22B-201ENST00000578049 PTPRBP23467 1997 aa7.3□□□□□ -1.24
SEC22B-201ENST00000578049 C8orf87E5RJ46 101 aa7.29□□□□□ -1.24
SEC22B-201ENST00000578049 C1orf134Q5TEV5 83 aa7.29□□□□□ -1.24
SEC22B-201ENST00000578049 SPINK1P00995 79 aa7.28□□□□□ -1.24
SEC22B-201ENST00000578049 FSHBP01225 129 aa7.28□□□□□ -1.24
SEC22B-201ENST00000578049 F8P00451 2351 aa7.27□□□□□ -1.24
SEC22B-201ENST00000578049 A8MWP4 228 aa7.27□□□□□ -1.25
SEC22B-201ENST00000578049 C16orf90A8MZG2 172 aa7.27□□□□□ -1.25
SEC22B-201ENST00000578049 LINC00528Q8N1L1 170 aa7.27□□□□□ -1.25
SEC22B-201ENST00000578049 KCNQ1DNQ9H478 68 aa7.27□□□□□ -1.25
SEC22B-201ENST00000578049 Q6ZRP5 223 aa7.26□□□□□ -1.25
SEC22B-201ENST00000578049 IGKV2D-30A0A075B6S6 120 aa7.25□□□□□ -1.25
SEC22B-201ENST00000578049 IGKV2-30P06310 120 aa7.25□□□□□ -1.25
SEC22B-201ENST00000578049 FAM229AH3BQW9 127 aa7.25□□□□□ -1.25
SEC22B-201ENST00000578049 C7orf65Q6ZTY9 151 aa7.25□□□□□ -1.25
SEC22B-201ENST00000578049 ATP11AUNQ6ZP68 121 aa7.24□□□□□ -1.25
SEC22B-201ENST00000578049 Q8NAQ8 132 aa7.24□□□□□ -1.25
SEC22B-201ENST00000578049 SMR3AQ99954 134 aa7.24□□□□□ -1.25
SEC22B-201ENST00000578049 COL4A2P08572 1712 aa7.23□□□□□ -1.25
SEC22B-201ENST00000578049 H7BZZ5 65 aa7.23□□□□□ -1.25
SEC22B-201ENST00000578049 SPTBN4Q9H254 2564 aa7.23□□□□□ -1.25
SEC22B-201ENST00000578049 CHD8Q9HCK8 2581 aa7.23□□□□□ -1.25
SEC22B-201ENST00000578049 DNAH10OSP0CZ25 163 aa7.22□□□□□ -1.25
SEC22B-201ENST00000578049 EPM2AB3EWF7 344 aa7.22□□□□□ -1.25
SEC22B-201ENST00000578049 SERTAD4-AS1Q5TG53 156 aa7.22□□□□□ -1.25
SEC22B-201ENST00000578049 PRR34Q9NV39 138 aa7.22□□□□□ -1.25
SEC22B-201ENST00000578049 RETNLBQ9BQ08 111 aa7.21□□□□□ -1.25
SEC22B-201ENST00000578049 COA5Q86WW8 74 aa7.2□□□□□ -1.26
SEC22B-201ENST00000578049 MRPL34Q9BQ48 92 aaKnown RBP7.2□□□□□ -1.26
SEC22B-201ENST00000578049 COL27A1Q8IZC6 1860 aaPredicted RBP7.2□□□□□ -1.26
SEC22B-201ENST00000578049 K7EQZ3 153 aa7.2□□□□□ -1.26
SEC22B-201ENST00000578049 RPL37AP61513 92 aaKnown RBP7.2□□□□□ -1.26
SEC22B-201ENST00000578049 A8MUN3 132 aa7.2□□□□□ -1.26
SEC22B-201ENST00000578049 IGLV1-50A0A075B6I6 118 aa7.19□□□□□ -1.26
SEC22B-201ENST00000578049 CD164Q04900 197 aa7.19□□□□□ -1.26
SEC22B-201ENST00000578049 ST20-AS1Q8NBB2 130 aa7.19□□□□□ -1.26
SEC22B-201ENST00000578049 LINC00313P59037 77 aa7.19□□□□□ -1.26
SEC22B-201ENST00000578049 UQCR11O14957 56 aa7.19□□□□□ -1.26
SEC22B-201ENST00000578049 EIF4EBP3O60516 100 aaPredicted RBP7.19□□□□□ -1.26
SEC22B-201ENST00000578049 PRR15Q8IV56 129 aa7.19□□□□□ -1.26
SEC22B-201ENST00000578049 PLA2G2DQ9UNK4 145 aa7.18□□□□□ -1.26
SEC22B-201ENST00000578049 LINC00612Q8N6U2 182 aa7.18□□□□□ -1.26
SEC22B-201ENST00000578049 CSNK1G2-AS1Q8NCQ2 148 aa7.18□□□□□ -1.26
SEC22B-201ENST00000578049 SPANXA2-OT1Q8N9U9 137 aa7.17□□□□□ -1.26
SEC22B-201ENST00000578049 ANKRD17O75179 2603 aaKnown RBP7.16□□□□□ -1.26
SEC22B-201ENST00000578049 LINC00336Q6ZUF6 198 aa7.16□□□□□ -1.26
SEC22B-201ENST00000578049 OBSCN-AS1Q96MR7 158 aa7.16□□□□□ -1.26
SEC22B-201ENST00000578049 TLX1NBP0CAT3 122 aa7.16□□□□□ -1.26
SEC22B-201ENST00000578049 MDFIQ99750 246 aa7.15□□□□□ -1.26
SEC22B-201ENST00000578049 PHF5AQ7RTV0 110 aaKnown RBP7.15□□□□□ -1.27
SEC22B-201ENST00000578049 WIPF1O43516 503 aa7.14□□□□□ -1.27
SEC22B-201ENST00000578049 POLQO75417 2590 aa7.14□□□□□ -1.27
SEC22B-201ENST00000578049 LINC00588Q9Y4M8 146 aa7.14□□□□□ -1.27
SEC22B-201ENST00000578049 NBDYA0A0U1RRE5 68 aa7.13□□□□□ -1.27
SEC22B-201ENST00000578049 SPACA4Q8TDM5 124 aa7.13□□□□□ -1.27
SEC22B-201ENST00000578049 IGFL1Q6UW32 110 aa7.13□□□□□ -1.27
SEC22B-201ENST00000578049 ACANP16112 2415 aa7.12□□□□□ -1.27
SEC22B-201ENST00000578049 Q8N377 158 aa7.12□□□□□ -1.27
SEC22B-201ENST00000578049 C8orf17Q9NRJ1 99 aa7.12□□□□□ -1.27
SEC22B-201ENST00000578049 SSBP3-AS1Q7Z2R9 100 aa7.11□□□□□ -1.27
SEC22B-201ENST00000578049 KTN1-AS1Q86SY8 53 aa7.11□□□□□ -1.27
SEC22B-201ENST00000578049 PCSK5Q92824 1860 aa7.1□□□□□ -1.27
SEC22B-201ENST00000578049 FASNP49327 2511 aaKnown RBP7.09□□□□□ -1.27
SEC22B-201ENST00000578049 A0A1B0GVX0 72 aa7.09□□□□□ -1.27
SEC22B-201ENST00000578049 IGLV5-48A0A075B6I7 105 aa7.08□□□□□ -1.28
SEC22B-201ENST00000578049 RTL8CO15255 209 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms