RNA–Protein interactions for RNA: ENST00000577210.5

COPS3-213, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 752 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-213ENST00000577210 H3BSH0 61 aa0.44□□□□□ -2.34
COPS3-213ENST00000577210 I3L3M4 83 aa0.44□□□□□ -2.34
COPS3-213ENST00000577210 NDUFC1O43677 76 aa0.44□□□□□ -2.34
COPS3-213ENST00000577210 COX6CP09669 75 aa0.44□□□□□ -2.34
COPS3-213ENST00000577210 RPS27P42677 84 aaKnown RBP0.44□□□□□ -2.34
COPS3-213ENST00000577210 CRIP1P50238 77 aa0.44□□□□□ -2.34
COPS3-213ENST00000577210 Q6JHZ5 121 aa0.44□□□□□ -2.34
COPS3-213ENST00000577210 MUSTN1Q8IVN3 82 aa0.44□□□□□ -2.34
COPS3-213ENST00000577210 TTTY10Q9BZA0 68 aa0.44□□□□□ -2.34
COPS3-213ENST00000577210 CDC42SE2Q9NRR3 84 aa0.44□□□□□ -2.34
COPS3-213ENST00000577210 TMEM167BQ9NRX6 74 aa0.44□□□□□ -2.34
COPS3-213ENST00000577210 PRO0255Q9UI72 69 aa0.44□□□□□ -2.34
COPS3-213ENST00000577210 LINC01558Q9Y6Z2 57 aa0.44□□□□□ -2.34
COPS3-213ENST00000577210 NESP48681 1621 aa0.44□□□□□ -2.34
COPS3-213ENST00000577210 PDE4DIPQ5VU43 2346 aa0.44□□□□□ -2.34
COPS3-213ENST00000577210 DIP2BQ9P265 1576 aa0.44□□□□□ -2.34
COPS3-213ENST00000577210 LRRC37A2A6NM11 1700 aa0.44□□□□□ -2.34
COPS3-213ENST00000577210 KNDC1Q76NI1 1749 aa0.44□□□□□ -2.34
COPS3-213ENST00000577210 PPRC1Q5VV67 1664 aaKnown RBP0.43□□□□□ -2.34
COPS3-213ENST00000577210 WNK3Q9BYP7 1800 aa0.43□□□□□ -2.34
COPS3-213ENST00000577210 AHNAKQ09666 5890 aaKnown RBP0.43□□□□□ -2.34
COPS3-213ENST00000577210 LAMC1P11047 1609 aa0.43□□□□□ -2.34
COPS3-213ENST00000577210 EP300Q09472 2414 aaPredicted RBP0.43□□□□□ -2.34
COPS3-213ENST00000577210 TCHHQ07283 1943 aa0.43□□□□□ -2.34
COPS3-213ENST00000577210 A0A087WVE0 104 aa0.43□□□□□ -2.34
COPS3-213ENST00000577210 A0A1B0GUT8 65 aa0.43□□□□□ -2.34
COPS3-213ENST00000577210 D6R8Y8 96 aa0.43□□□□□ -2.34
COPS3-213ENST00000577210 NDUFA3O95167 84 aa0.43□□□□□ -2.34
COPS3-213ENST00000577210 ARMS2P0C7Q2 107 aa0.43□□□□□ -2.34
COPS3-213ENST00000577210 IAPPP10997 89 aa0.43□□□□□ -2.34
COPS3-213ENST00000577210 PLNP26678 52 aa0.43□□□□□ -2.34
COPS3-213ENST00000577210 TFF3Q07654 80 aa0.43□□□□□ -2.34
COPS3-213ENST00000577210 CNFNQ9BYD5 112 aa0.43□□□□□ -2.34
COPS3-213ENST00000577210 LINC00846Q9NV44 126 aa0.43□□□□□ -2.34
COPS3-213ENST00000577210 MROH2AA6NES4 1674 aa0.43□□□□□ -2.34
COPS3-213ENST00000577210 NOTCH1P46531 2555 aa0.43□□□□□ -2.34
COPS3-213ENST00000577210 KIAA0556O60303 1618 aa0.42□□□□□ -2.34
COPS3-213ENST00000577210 SAMD9LQ8IVG5 1584 aa0.42□□□□□ -2.34
COPS3-213ENST00000577210 CREBBPQ92793 2442 aa0.42□□□□□ -2.34
COPS3-213ENST00000577210 URB1O60287 2271 aaKnown RBP0.42□□□□□ -2.34
COPS3-213ENST00000577210 TRBV7-4A0A0J9YYF1 115 aa0.42□□□□□ -2.34
COPS3-213ENST00000577210 LCE6AA0A183 80 aa0.42□□□□□ -2.34
COPS3-213ENST00000577210 F8WEM9 126 aa0.42□□□□□ -2.34
COPS3-213ENST00000577210 MGPP08493 103 aa0.42□□□□□ -2.34
COPS3-213ENST00000577210 POLR2KP53803 58 aaKnown RBP0.42□□□□□ -2.34
COPS3-213ENST00000577210 PLGLAQ15195 96 aa0.42□□□□□ -2.34
COPS3-213ENST00000577210 PIGYQ3MUY2 71 aa0.42□□□□□ -2.34
COPS3-213ENST00000577210 ATP5EP2Q5VTU8 51 aa0.42□□□□□ -2.34
COPS3-213ENST00000577210 ENHOQ6UWT2 76 aa0.42□□□□□ -2.34
COPS3-213ENST00000577210 FDCSPQ8NFU4 85 aa0.42□□□□□ -2.34
COPS3-213ENST00000577210 LINC00472Q9H8W2 130 aa0.42□□□□□ -2.34
COPS3-213ENST00000577210 TIMM8BQ9Y5J9 83 aaPredicted RBP0.42□□□□□ -2.34
COPS3-213ENST00000577210 MAP1BP46821 2468 aaKnown RBP0.42□□□□□ -2.34
COPS3-213ENST00000577210 RIF1Q5UIP0 2472 aaKnown RBP0.42□□□□□ -2.34
COPS3-213ENST00000577210 DEPDC5O75140 1603 aa0.42□□□□□ -2.34
COPS3-213ENST00000577210 NHSL1Q5SYE7 1610 aa0.42□□□□□ -2.34
COPS3-213ENST00000577210 IQGAP3Q86VI3 1631 aa0.42□□□□□ -2.34
COPS3-213ENST00000577210 MYO3AQ8NEV4 1616 aa0.42□□□□□ -2.34
COPS3-213ENST00000577210 USP32Q8NFA0 1604 aa0.42□□□□□ -2.34
COPS3-213ENST00000577210 CEP250Q9BV73 2442 aa0.42□□□□□ -2.34
COPS3-213ENST00000577210 MUC5BQ9HC84 5762 aaPredicted RBP0.42□□□□□ -2.34
COPS3-213ENST00000577210 CDC42BPAQ5VT25 1732 aa0.41□□□□□ -2.34
COPS3-213ENST00000577210 SUPT6HQ7KZ85 1726 aaKnown RBP0.41□□□□□ -2.34
COPS3-213ENST00000577210 IQGAP1P46940 1657 aa0.41□□□□□ -2.34
COPS3-213ENST00000577210 ZC3H13Q5T200 1668 aaKnown RBP0.41□□□□□ -2.34
COPS3-213ENST00000577210 LINC00959A0A1B0GUT2 108 aa0.41□□□□□ -2.34
COPS3-213ENST00000577210 H0YGX0 51 aa0.41□□□□□ -2.34
COPS3-213ENST00000577210 M0R1W7 72 aa0.41□□□□□ -2.34
COPS3-213ENST00000577210 PRCDQ00LT1 54 aa0.41□□□□□ -2.34
COPS3-213ENST00000577210 C10orf113Q5VZT2 155 aa0.41□□□□□ -2.34
COPS3-213ENST00000577210 SPINK6Q6UWN8 80 aa0.41□□□□□ -2.34
COPS3-213ENST00000577210 WFDC9Q8NEX5 89 aa0.41□□□□□ -2.34
COPS3-213ENST00000577210 LINC00308Q8TCZ7 52 aa0.41□□□□□ -2.34
COPS3-213ENST00000577210 COX14Q96I36 57 aa0.41□□□□□ -2.34
COPS3-213ENST00000577210 MYO7BQ6PIF6 2116 aa0.41□□□□□ -2.34
COPS3-213ENST00000577210 MROH1Q8NDA8 1641 aa0.41□□□□□ -2.34
COPS3-213ENST00000577210 RAPGEF6Q8TEU7 1601 aa0.41□□□□□ -2.34
COPS3-213ENST00000577210 CICQ96RK0 1608 aaPredicted RBP0.41□□□□□ -2.34
COPS3-213ENST00000577210 EIF2AK4Q9P2K8 1649 aaKnown RBP0.41□□□□□ -2.34
COPS3-213ENST00000577210 CACNA1CQ13936 2221 aa0.41□□□□□ -2.34
COPS3-213ENST00000577210 CRYBG1Q9Y4K1 1723 aa0.41□□□□□ -2.34
COPS3-213ENST00000577210 ZNF469Q96JG9 3925 aaPredicted RBP0.41□□□□□ -2.34
COPS3-213ENST00000577210 NCOR1O75376 2440 aa0.4□□□□□ -2.34
COPS3-213ENST00000577210 GVINP1Q7Z2Y8 2422 aa0.4□□□□□ -2.34
COPS3-213ENST00000577210 DUOX1Q9NRD9 1551 aa0.4□□□□□ -2.34
COPS3-213ENST00000577210 AHCTF1Q8WYP5 2266 aa0.4□□□□□ -2.34
COPS3-213ENST00000577210 WNK2Q9Y3S1 2297 aa0.4□□□□□ -2.34
COPS3-213ENST00000577210 SHPRHQ149N8 1683 aa0.4□□□□□ -2.34
COPS3-213ENST00000577210 GCC2Q8IWJ2 1684 aa0.4□□□□□ -2.34
COPS3-213ENST00000577210 ITSN2Q9NZM3 1697 aa0.4□□□□□ -2.34
COPS3-213ENST00000577210 C2CD3Q4AC94 2353 aa0.4□□□□□ -2.34
COPS3-213ENST00000577210 CADP27708 2225 aa0.4□□□□□ -2.35
COPS3-213ENST00000577210 MAP3K4Q9Y6R4 1608 aa0.4□□□□□ -2.35
COPS3-213ENST00000577210 TRAV21A0A0B4J279 112 aa0.4□□□□□ -2.35
COPS3-213ENST00000577210 H0YGG7 62 aa0.4□□□□□ -2.35
COPS3-213ENST00000577210 I3L2K1 104 aa0.4□□□□□ -2.35
COPS3-213ENST00000577210 NDUFA1O15239 70 aa0.4□□□□□ -2.35
COPS3-213ENST00000577210 STATHP02808 62 aa0.4□□□□□ -2.35
COPS3-213ENST00000577210 KRTAP2-3P0C7H8 128 aa0.4□□□□□ -2.35
COPS3-213ENST00000577210 SAA2P0DJI9 122 aaPredicted RBP0.4□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms