RNA–Protein interactions for RNA: ENST00000573895.1

ABR-223, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

TSL 3

Gene ABR, Length 1,010 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-223ENST00000573895 LINC00158P58513 81 aa9.18□□□□□ -0.94
ABR-223ENST00000573895 Q6ZVH6 145 aa9.18□□□□□ -0.94
ABR-223ENST00000573895 TLX1NBP0CAT3 122 aa9.17□□□□□ -0.94
ABR-223ENST00000573895 SPANXB1Q9NS25 103 aaPredicted RBP9.17□□□□□ -0.94
ABR-223ENST00000573895 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.17□□□□□ -0.94
ABR-223ENST00000573895 SMIM13P0DJ93 91 aa9.16□□□□□ -0.94
ABR-223ENST00000573895 PFN2P35080 140 aa9.16□□□□□ -0.94
ABR-223ENST00000573895 COPS9Q8WXC6 57 aa9.16□□□□□ -0.94
ABR-223ENST00000573895 NDUFC2-KCTD14E9PQ53 114 aa9.15□□□□□ -0.94
ABR-223ENST00000573895 HNRNPA3P51991 378 aaKnown RBP9.15□□□□□ -0.94
ABR-223ENST00000573895 SRSF9Q13242 221 aaKnown RBP eCLIP9.15□□□□□ -0.94
ABR-223ENST00000573895 TAL2Q16559 108 aa9.15□□□□□ -0.94
ABR-223ENST00000573895 C9orf116Q5BN46 136 aaPredicted RBP9.15□□□□□ -0.94
ABR-223ENST00000573895 C2orf91Q6ZV80 131 aa9.15□□□□□ -0.94
ABR-223ENST00000573895 LITAFQ99732 161 aa9.15□□□□□ -0.94
ABR-223ENST00000573895 SPANXDQ9BXN6 97 aa9.15□□□□□ -0.94
ABR-223ENST00000573895 SPANXCQ9NY87 97 aa9.15□□□□□ -0.94
ABR-223ENST00000573895 LOC107984640A0A0U1RRK4 108 aa9.14□□□□□ -0.95
ABR-223ENST00000573895 PANO1I0J062 215 aa9.14□□□□□ -0.95
ABR-223ENST00000573895 IFITM1P13164 125 aa9.14□□□□□ -0.95
ABR-223ENST00000573895 PTTG1IPP53801 180 aa9.14□□□□□ -0.95
ABR-223ENST00000573895 KRTAP10-4P60372 401 aaPredicted RBP9.14□□□□□ -0.95
ABR-223ENST00000573895 ADAMTSL4-AS1Q5T5F5 129 aa9.14□□□□□ -0.95
ABR-223ENST00000573895 MIR7-3HGQ8N6C7 128 aa9.13□□□□□ -0.95
ABR-223ENST00000573895 SPACA4Q8TDM5 124 aa9.13□□□□□ -0.95
ABR-223ENST00000573895 PPDPFQ9H3Y8 114 aa9.13□□□□□ -0.95
ABR-223ENST00000573895 A0A0U1RRA0 63 aa9.12□□□□□ -0.95
ABR-223ENST00000573895 HIST1H4GQ99525 98 aa9.12□□□□□ -0.95
ABR-223ENST00000573895 TP73-AS1Q9UF72 201 aa9.12□□□□□ -0.95
ABR-223ENST00000573895 LOC107984156A0A0G2JMH3 177 aa9.11□□□□□ -0.95
ABR-223ENST00000573895 DDTP30046 118 aa9.11□□□□□ -0.95
ABR-223ENST00000573895 ARL17AQ8IVW1 177 aa9.11□□□□□ -0.95
ABR-223ENST00000573895 HSD52Q0P140 79 aa9.1□□□□□ -0.95
ABR-223ENST00000573895 DPH3Q96FX2 82 aa9.1□□□□□ -0.95
ABR-223ENST00000573895 SND1-IT1Q9HBX3 110 aa9.1□□□□□ -0.95
ABR-223ENST00000573895 PLAC8Q9NZF1 115 aa9.1□□□□□ -0.95
ABR-223ENST00000573895 LINC00474Q9P2X8 69 aa9.1□□□□□ -0.95
ABR-223ENST00000573895 HERC1Q15751 4861 aa9.09□□□□□ -0.95
ABR-223ENST00000573895 A0A087WYN8 130 aa9.09□□□□□ -0.95
ABR-223ENST00000573895 CHTF8P0CG12 524 aa9.09□□□□□ -0.95
ABR-223ENST00000573895 RPL37AP61513 92 aaKnown RBP9.09□□□□□ -0.95
ABR-223ENST00000573895 Q6ZRP5 223 aa9.09□□□□□ -0.95
ABR-223ENST00000573895 LINC00308Q8TCZ7 52 aa9.09□□□□□ -0.95
ABR-223ENST00000573895 RPL18AQ02543 176 aaKnown RBP9.08□□□□□ -0.96
ABR-223ENST00000573895 MUSTN1Q8IVN3 82 aa9.08□□□□□ -0.96
ABR-223ENST00000573895 DAND5Q8N907 189 aa9.08□□□□□ -0.96
ABR-223ENST00000573895 PKHD1L1Q86WI1 4243 aa9.07□□□□□ -0.96
ABR-223ENST00000573895 CTAG1AP78358 180 aa9.07□□□□□ -0.96
ABR-223ENST00000573895 RPL24P83731 157 aaKnown RBP9.07□□□□□ -0.96
ABR-223ENST00000573895 GAGE2BQ13066 116 aa9.07□□□□□ -0.96
ABR-223ENST00000573895 GAGE2EQ4V326 116 aa9.07□□□□□ -0.96
ABR-223ENST00000573895 CEND1Q8N111 149 aa9.07□□□□□ -0.96
ABR-223ENST00000573895 GAGE2DQ9UEU5 116 aa9.07□□□□□ -0.96
ABR-223ENST00000573895 KRTAP29-1A8MX34 341 aaPredicted RBP9.06□□□□□ -0.96
ABR-223ENST00000573895 A0A096LNI7 61 aa9.05□□□□□ -0.96
ABR-223ENST00000573895 M0R143 59 aa9.05□□□□□ -0.96
ABR-223ENST00000573895 PLA2G2DQ9UNK4 145 aa9.05□□□□□ -0.96
ABR-223ENST00000573895 IGKV2-24A0A0C4DH68 120 aa9.04□□□□□ -0.96
ABR-223ENST00000573895 TMEM238LA0A1B0GVL6 79 aa9.04□□□□□ -0.96
ABR-223ENST00000573895 A6NJY4 79 aa9.04□□□□□ -0.96
ABR-223ENST00000573895 NDUFC2O95298 119 aa9.04□□□□□ -0.96
ABR-223ENST00000573895 SOSTDC1Q6X4U4 206 aa9.04□□□□□ -0.96
ABR-223ENST00000573895 XAGE1AQ9HD64 81 aa9.04□□□□□ -0.96
ABR-223ENST00000573895 PCP4L1A6NKN8 68 aa9.03□□□□□ -0.96
ABR-223ENST00000573895 C9orf129Q5T035 196 aaKnown RBP9.03□□□□□ -0.96
ABR-223ENST00000573895 C7orf33Q8WU49 177 aa9.03□□□□□ -0.96
ABR-223ENST00000573895 LRP1Q07954 4544 aaKnown RBP9.03□□□□□ -0.96
ABR-223ENST00000573895 EIF4EBP3O60516 100 aaPredicted RBP9.02□□□□□ -0.97
ABR-223ENST00000573895 OXTP01178 125 aa9.02□□□□□ -0.97
ABR-223ENST00000573895 NPC2P61916 151 aa9.02□□□□□ -0.97
ABR-223ENST00000573895 A4D1N5 150 aa9.01□□□□□ -0.97
ABR-223ENST00000573895 J3QL48 77 aa9.01□□□□□ -0.97
ABR-223ENST00000573895 FAT3Q8TDW7 4589 aa9□□□□□ -0.97
ABR-223ENST00000573895 BVES-AS1Q5T3Y7 98 aa9□□□□□ -0.97
ABR-223ENST00000573895 IGLV5-37A0A075B6J1 123 aa8.99□□□□□ -0.97
ABR-223ENST00000573895 TRBV10-2A0A0K0K1G8 114 aa8.99□□□□□ -0.97
ABR-223ENST00000573895 HINT1P49773 126 aaPredicted RBP8.99□□□□□ -0.97
ABR-223ENST00000573895 KRTAP3-3Q9BYR6 98 aa8.99□□□□□ -0.97
ABR-223ENST00000573895 KRTAP3-2Q9BYR7 98 aa8.99□□□□□ -0.97
ABR-223ENST00000573895 VPREB1P12018 145 aa8.98□□□□□ -0.97
ABR-223ENST00000573895 FXYD2P54710 66 aa8.98□□□□□ -0.97
ABR-223ENST00000573895 A6NDN8 102 aa8.97□□□□□ -0.97
ABR-223ENST00000573895 M0R378 163 aa8.97□□□□□ -0.97
ABR-223ENST00000573895 NKAPP1Q8N9T2 125 aa8.97□□□□□ -0.97
ABR-223ENST00000573895 TRAV13-2A0A0B4J235 113 aa8.96□□□□□ -0.98
ABR-223ENST00000573895 CFC1BP0CG36 223 aa8.96□□□□□ -0.98
ABR-223ENST00000573895 CFC1P0CG37 223 aa8.96□□□□□ -0.98
ABR-223ENST00000573895 A0A0B4J2C4 111 aa8.95□□□□□ -0.98
ABR-223ENST00000573895 A0A1B0GWB2 263 aa8.95□□□□□ -0.98
ABR-223ENST00000573895 A0A1W2PNN7 141 aa8.95□□□□□ -0.98
ABR-223ENST00000573895 LBHQ53QV2 105 aaPredicted RBP8.95□□□□□ -0.98
ABR-223ENST00000573895 SERTAD4-AS1Q5TG53 156 aa8.95□□□□□ -0.98
ABR-223ENST00000573895 RAB37Q96AX2 223 aa8.95□□□□□ -0.98
ABR-223ENST00000573895 IGKV2-28A0A075B6P5 120 aa8.94□□□□□ -0.98
ABR-223ENST00000573895 FAM168BA1KXE4 195 aa8.94□□□□□ -0.98
ABR-223ENST00000573895 IGKV2D-28P01615 120 aa8.94□□□□□ -0.98
ABR-223ENST00000573895 PRR3P79522 188 aaKnown RBP8.94□□□□□ -0.98
ABR-223ENST00000573895 Q8NDZ9 215 aa8.94□□□□□ -0.98
ABR-223ENST00000573895 NHP2Q9NX24 153 aaKnown RBP8.94□□□□□ -0.98
ABR-223ENST00000573895 CBY1Q9Y3M2 126 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms