RNA–Protein interactions for RNA: ENST00000573577.5

RPAIN-213, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,282 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-213ENST00000573577 NMUP48645 174 aa8.49□□□□□ -1.05
RPAIN-213ENST00000573577 SNRPEP62304 92 aaKnown RBP8.49□□□□□ -1.05
RPAIN-213ENST00000573577 C9orf129Q5T035 196 aaKnown RBP8.49□□□□□ -1.05
RPAIN-213ENST00000573577 XAGE1AQ9HD64 81 aa8.49□□□□□ -1.05
RPAIN-213ENST00000573577 E9PLD3 99 aa8.48□□□□□ -1.05
RPAIN-213ENST00000573577 FAM19A5Q7Z5A7 132 aaPredicted RBP8.48□□□□□ -1.05
RPAIN-213ENST00000573577 FAM168BA1KXE4 195 aa8.47□□□□□ -1.05
RPAIN-213ENST00000573577 LINC00158P58513 81 aa8.47□□□□□ -1.05
RPAIN-213ENST00000573577 MEIG1Q5JSS6 88 aa8.47□□□□□ -1.05
RPAIN-213ENST00000573577 C5orf52A6NGY3 159 aa8.46□□□□□ -1.06
RPAIN-213ENST00000573577 TSPEAR-AS2P59090 65 aa8.46□□□□□ -1.06
RPAIN-213ENST00000573577 HERC1Q15751 4861 aa8.45□□□□□ -1.06
RPAIN-213ENST00000573577 M0QXV9 152 aa8.45□□□□□ -1.06
RPAIN-213ENST00000573577 DMBT1Q9UGM3 2413 aaPredicted RBP8.45□□□□□ -1.06
RPAIN-213ENST00000573577 HNRNPA3P51991 378 aaKnown RBP8.44□□□□□ -1.06
RPAIN-213ENST00000573577 PHF5AQ7RTV0 110 aaKnown RBP8.44□□□□□ -1.06
RPAIN-213ENST00000573577 SND1-IT1Q9HBX3 110 aa8.44□□□□□ -1.06
RPAIN-213ENST00000573577 PLA2G2DQ9UNK4 145 aa8.44□□□□□ -1.06
RPAIN-213ENST00000573577 PKHD1L1Q86WI1 4243 aa8.43□□□□□ -1.06
RPAIN-213ENST00000573577 SMIM13P0DJ93 91 aa8.43□□□□□ -1.06
RPAIN-213ENST00000573577 LBHQ53QV2 105 aaPredicted RBP8.43□□□□□ -1.06
RPAIN-213ENST00000573577 TP73-AS1Q9UF72 201 aa8.43□□□□□ -1.06
RPAIN-213ENST00000573577 A0A0U1RRA0 63 aa8.42□□□□□ -1.06
RPAIN-213ENST00000573577 KRTAP29-1A8MX34 341 aaPredicted RBP8.42□□□□□ -1.06
RPAIN-213ENST00000573577 UBE2BP63146 152 aa8.42□□□□□ -1.06
RPAIN-213ENST00000573577 RPL24P83731 157 aaKnown RBP8.42□□□□□ -1.06
RPAIN-213ENST00000573577 SERTAD4-AS1Q5TG53 156 aa8.42□□□□□ -1.06
RPAIN-213ENST00000573577 NKAPP1Q8N9T2 125 aa8.42□□□□□ -1.06
RPAIN-213ENST00000573577 C22orf24Q9Y442 160 aa8.42□□□□□ -1.06
RPAIN-213ENST00000573577 PRR3P79522 188 aaKnown RBP8.41□□□□□ -1.06
RPAIN-213ENST00000573577 KRTAP7-1Q8IUC3 87 aa8.41□□□□□ -1.06
RPAIN-213ENST00000573577 ATOH7Q8N100 152 aa8.41□□□□□ -1.06
RPAIN-213ENST00000573577 IGLV5-37A0A075B6J1 123 aa8.4□□□□□ -1.06
RPAIN-213ENST00000573577 HSBP1L1C9JCN9 74 aa8.4□□□□□ -1.06
RPAIN-213ENST00000573577 MRPL55Q7Z7F7 128 aaKnown RBP8.4□□□□□ -1.06
RPAIN-213ENST00000573577 MIR7-3HGQ8N6C7 128 aa8.4□□□□□ -1.06
RPAIN-213ENST00000573577 ZNF815PA8K554 130 aa8.39□□□□□ -1.07
RPAIN-213ENST00000573577 FAT3Q8TDW7 4589 aa8.39□□□□□ -1.07
RPAIN-213ENST00000573577 IGKV2D-26A0A0A0MRZ7 120 aa8.38□□□□□ -1.07
RPAIN-213ENST00000573577 A0A0J9YXY3 114 aa8.38□□□□□ -1.07
RPAIN-213ENST00000573577 SCGB1D1O95968 90 aa8.38□□□□□ -1.07
RPAIN-213ENST00000573577 OXTP01178 125 aa8.38□□□□□ -1.07
RPAIN-213ENST00000573577 PSORS1C2Q9UIG4 136 aa8.38□□□□□ -1.07
RPAIN-213ENST00000573577 LRP1Q07954 4544 aaKnown RBP8.38□□□□□ -1.07
RPAIN-213ENST00000573577 ANKRD39Q53RE8 183 aa8.37□□□□□ -1.07
RPAIN-213ENST00000573577 MIEN1Q9BRT3 115 aa8.37□□□□□ -1.07
RPAIN-213ENST00000573577 LOC100996750A0A140TA64 210 aa8.36□□□□□ -1.07
RPAIN-213ENST00000573577 VPREB1P12018 145 aa8.36□□□□□ -1.07
RPAIN-213ENST00000573577 C1orf137Q5JT78 98 aa8.36□□□□□ -1.07
RPAIN-213ENST00000573577 BOD1L2Q8IYS8 172 aa8.36□□□□□ -1.07
RPAIN-213ENST00000573577 KRTAP4-6Q9BYQ5 205 aa8.36□□□□□ -1.07
RPAIN-213ENST00000573577 TIMM17BO60830 172 aa8.35□□□□□ -1.07
RPAIN-213ENST00000573577 DAND5Q8N907 189 aa8.35□□□□□ -1.07
RPAIN-213ENST00000573577 LINC00167Q96N53 147 aa8.35□□□□□ -1.07
RPAIN-213ENST00000573577 LOC107984156A0A0G2JMH3 177 aa8.34□□□□□ -1.07
RPAIN-213ENST00000573577 XP32Q5T750 250 aa8.34□□□□□ -1.07
RPAIN-213ENST00000573577 SCGB1D4Q6XE38 83 aa8.34□□□□□ -1.07
RPAIN-213ENST00000573577 ARL17AQ8IVW1 177 aa8.34□□□□□ -1.07
RPAIN-213ENST00000573577 TTTY13Q9BZ97 58 aa8.34□□□□□ -1.07
RPAIN-213ENST00000573577 GAGE10A6NGK3 116 aa8.33□□□□□ -1.08
RPAIN-213ENST00000573577 RPL37AP8A6NKH3 93 aa8.33□□□□□ -1.08
RPAIN-213ENST00000573577 TMEM238C9JI98 176 aa8.32□□□□□ -1.08
RPAIN-213ENST00000573577 M0R378 163 aa8.32□□□□□ -1.08
RPAIN-213ENST00000573577 SPINK6Q6UWN8 80 aa8.32□□□□□ -1.08
RPAIN-213ENST00000573577 KRTAP11-1Q8IUC1 163 aa8.32□□□□□ -1.08
RPAIN-213ENST00000573577 H3BS24 57 aa8.31□□□□□ -1.08
RPAIN-213ENST00000573577 IGLV7-43P04211 117 aa8.31□□□□□ -1.08
RPAIN-213ENST00000573577 ADAMTSL4-AS1Q5T5F5 129 aa8.31□□□□□ -1.08
RPAIN-213ENST00000573577 PCP2Q8IVA1 136 aa8.31□□□□□ -1.08
RPAIN-213ENST00000573577 IGLV1-50A0A075B6I6 118 aa8.3□□□□□ -1.08
RPAIN-213ENST00000573577 IGKV2-28A0A075B6P5 120 aa8.3□□□□□ -1.08
RPAIN-213ENST00000573577 NDUFC2O95298 119 aa8.3□□□□□ -1.08
RPAIN-213ENST00000573577 IGKV2D-28P01615 120 aa8.3□□□□□ -1.08
RPAIN-213ENST00000573577 Q8NDZ9 215 aa8.3□□□□□ -1.08
RPAIN-213ENST00000573577 COPS9Q8WXC6 57 aa8.3□□□□□ -1.08
RPAIN-213ENST00000573577 LITAFQ99732 161 aa8.3□□□□□ -1.08
RPAIN-213ENST00000573577 TRBV10-2A0A0K0K1G8 114 aa8.29□□□□□ -1.08
RPAIN-213ENST00000573577 NCR3O14931 201 aa8.29□□□□□ -1.08
RPAIN-213ENST00000573577 SRSF9Q13242 221 aaKnown RBP eCLIP8.29□□□□□ -1.08
RPAIN-213ENST00000573577 JOSD1Q15040 202 aaPredicted RBP8.29□□□□□ -1.08
RPAIN-213ENST00000573577 SPANXB1Q9NS25 103 aaPredicted RBP8.29□□□□□ -1.08
RPAIN-213ENST00000573577 BCE1O60756 84 aa8.28□□□□□ -1.08
RPAIN-213ENST00000573577 NPC2P61916 151 aa8.28□□□□□ -1.08
RPAIN-213ENST00000573577 S100A12P80511 92 aa8.28□□□□□ -1.08
RPAIN-213ENST00000573577 Q6ZVH6 145 aa8.28□□□□□ -1.08
RPAIN-213ENST00000573577 LINC00308Q8TCZ7 52 aa8.28□□□□□ -1.08
RPAIN-213ENST00000573577 SPANXDQ9BXN6 97 aa8.28□□□□□ -1.08
RPAIN-213ENST00000573577 SPANXCQ9NY87 97 aa8.28□□□□□ -1.08
RPAIN-213ENST00000573577 REG3GQ6UW15 175 aa8.27□□□□□ -1.09
RPAIN-213ENST00000573577 DIRC1Q969H9 104 aa8.27□□□□□ -1.09
RPAIN-213ENST00000573577 ZNF861PO60384 105 aa8.26□□□□□ -1.09
RPAIN-213ENST00000573577 MT1HL1P0DM35 61 aa8.26□□□□□ -1.09
RPAIN-213ENST00000573577 IFITM1P13164 125 aa8.26□□□□□ -1.09
RPAIN-213ENST00000573577 RPL28P46779 137 aaKnown RBP8.26□□□□□ -1.09
RPAIN-213ENST00000573577 SOSTDC1Q6X4U4 206 aa8.26□□□□□ -1.09
RPAIN-213ENST00000573577 VAMP8Q9BV40 100 aa8.26□□□□□ -1.09
RPAIN-213ENST00000573577 UBE2AP49459 152 aa8.25□□□□□ -1.09
RPAIN-213ENST00000573577 S100A7L2Q5SY68 101 aa8.25□□□□□ -1.09
RPAIN-213ENST00000573577 TMEM126AQ9H061 195 aa8.25□□□□□ -1.09
RPAIN-213ENST00000573577 PRYO14603 147 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms