RNA–Protein interactions for RNA: ENST00000572365.1

SF3B3-214, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-214ENST00000572365 DEFA4P12838 97 aa3.51□□□□□ -1.85
SF3B3-214ENST00000572365 DEFB1P60022 68 aa3.51□□□□□ -1.85
SF3B3-214ENST00000572365 PDE6HQ13956 83 aa3.51□□□□□ -1.85
SF3B3-214ENST00000572365 LCE1EQ5T753 118 aa3.51□□□□□ -1.85
SF3B3-214ENST00000572365 C2orf82Q6UX34 121 aa3.51□□□□□ -1.85
SF3B3-214ENST00000572365 Q86TA4 180 aa3.51□□□□□ -1.85
SF3B3-214ENST00000572365 SERP2Q8N6R1 65 aa3.51□□□□□ -1.85
SF3B3-214ENST00000572365 CHCHD10Q8WYQ3 142 aaPredicted RBP3.51□□□□□ -1.85
SF3B3-214ENST00000572365 C16orf74Q96GX8 76 aa3.51□□□□□ -1.85
SF3B3-214ENST00000572365 ODF3Q96PU9 254 aa3.51□□□□□ -1.85
SF3B3-214ENST00000572365 RNF5Q99942 180 aa3.51□□□□□ -1.85
SF3B3-214ENST00000572365 RHPN1-AS1Q9BWJ2 59 aa3.51□□□□□ -1.85
SF3B3-214ENST00000572365 DNAH8Q96JB1 4490 aa3.5□□□□□ -1.85
SF3B3-214ENST00000572365 TRAV12-2A0A075B6T6 113 aa3.5□□□□□ -1.85
SF3B3-214ENST00000572365 LOC389332A0A1B0GUA5 103 aa3.5□□□□□ -1.85
SF3B3-214ENST00000572365 ZNF815PA8K554 130 aa3.5□□□□□ -1.85
SF3B3-214ENST00000572365 ARMS2P0C7Q2 107 aa3.5□□□□□ -1.85
SF3B3-214ENST00000572365 ZNF138P52744 262 aa3.5□□□□□ -1.85
SF3B3-214ENST00000572365 NPC2P61916 151 aa3.5□□□□□ -1.85
SF3B3-214ENST00000572365 MRPL51Q4U2R6 128 aaKnown RBP3.5□□□□□ -1.85
SF3B3-214ENST00000572365 DAND5Q8N907 189 aa3.5□□□□□ -1.85
SF3B3-214ENST00000572365 DEFB104AQ8WTQ1 72 aa3.5□□□□□ -1.85
SF3B3-214ENST00000572365 FXYD5Q96DB9 178 aa3.5□□□□□ -1.85
SF3B3-214ENST00000572365 CNFNQ9BYD5 112 aa3.5□□□□□ -1.85
SF3B3-214ENST00000572365 AGPAT4-IT1Q9H0P7 198 aa3.5□□□□□ -1.85
SF3B3-214ENST00000572365 SERP1Q9Y6X1 66 aa3.5□□□□□ -1.85
SF3B3-214ENST00000572365 SMIM26A0A096LP01 95 aa3.49□□□□□ -1.85
SF3B3-214ENST00000572365 UPK2O00526 184 aa3.49□□□□□ -1.85
SF3B3-214ENST00000572365 NDUFC1O43677 76 aa3.49□□□□□ -1.85
SF3B3-214ENST00000572365 LINC00315P59091 139 aa3.49□□□□□ -1.85
SF3B3-214ENST00000572365 LINC00305Q7Z4B0 112 aa3.49□□□□□ -1.85
SF3B3-214ENST00000572365 C5orf38Q86SI9 138 aa3.49□□□□□ -1.85
SF3B3-214ENST00000572365 SLC25A29Q8N8R3 303 aa3.49□□□□□ -1.85
SF3B3-214ENST00000572365 C7orf33Q8WU49 177 aa3.49□□□□□ -1.85
SF3B3-214ENST00000572365 METTL26Q96S19 204 aa3.49□□□□□ -1.85
SF3B3-214ENST00000572365 DAZ1Q9NQZ3 744 aaKnown RBP3.49□□□□□ -1.85
SF3B3-214ENST00000572365 MRPL35Q9NZE8 188 aaKnown RBP3.49□□□□□ -1.85
SF3B3-214ENST00000572365 LPAP08519 4548 aa3.49□□□□□ -1.85
SF3B3-214ENST00000572365 IGKV2D-26A0A0A0MRZ7 120 aa3.48□□□□□ -1.85
SF3B3-214ENST00000572365 TRBV7-1A0A0A6YYK4 115 aa3.48□□□□□ -1.85
SF3B3-214ENST00000572365 IGHV7-4-1A0A0J9YVY3 117 aa3.48□□□□□ -1.85
SF3B3-214ENST00000572365 A0A0J9YX75 114 aa3.48□□□□□ -1.85
SF3B3-214ENST00000572365 RBAKDNA6NC62 111 aa3.48□□□□□ -1.85
SF3B3-214ENST00000572365 SDHAF1A6NFY7 115 aa3.48□□□□□ -1.85
SF3B3-214ENST00000572365 SAA1P0DJI8 122 aaPredicted RBP3.48□□□□□ -1.85
SF3B3-214ENST00000572365 DEFB130BP0DP73 79 aa3.48□□□□□ -1.85
SF3B3-214ENST00000572365 DEFB130AP0DP74 79 aa3.48□□□□□ -1.85
SF3B3-214ENST00000572365 CCL18P55774 89 aa3.48□□□□□ -1.85
SF3B3-214ENST00000572365 DAD1P61803 113 aa3.48□□□□□ -1.85
SF3B3-214ENST00000572365 RPL18AQ02543 176 aaKnown RBP3.48□□□□□ -1.85
SF3B3-214ENST00000572365 VMA21Q3ZAQ7 101 aa3.48□□□□□ -1.85
SF3B3-214ENST00000572365 C1orf195Q5TG92 126 aa3.48□□□□□ -1.85
SF3B3-214ENST00000572365 ATP5EP2Q5VTU8 51 aa3.48□□□□□ -1.85
SF3B3-214ENST00000572365 LYZL1Q6UWQ5 148 aa3.48□□□□□ -1.85
SF3B3-214ENST00000572365 ZFP2Q6ZN57 461 aa3.48□□□□□ -1.85
SF3B3-214ENST00000572365 PRNTQ86SH4 94 aa3.48□□□□□ -1.85
SF3B3-214ENST00000572365 TMEM141Q96I45 108 aa3.48□□□□□ -1.85
SF3B3-214ENST00000572365 SCGB3A1Q96QR1 104 aa3.48□□□□□ -1.85
SF3B3-214ENST00000572365 IGLV11-55A0A075B6I3 123 aa3.47□□□□□ -1.85
SF3B3-214ENST00000572365 LOC107984640A0A0U1RRK4 108 aa3.47□□□□□ -1.85
SF3B3-214ENST00000572365 C11orf86A6NJI1 115 aa3.47□□□□□ -1.85
SF3B3-214ENST00000572365 IGHV3-33P01772 117 aa3.47□□□□□ -1.85
SF3B3-214ENST00000572365 RNASE2P10153 161 aaKnown RBP3.47□□□□□ -1.85
SF3B3-214ENST00000572365 LGALS3P17931 250 aaKnown RBP3.47□□□□□ -1.85
SF3B3-214ENST00000572365 RPL27AP46776 148 aaKnown RBP3.47□□□□□ -1.85
SF3B3-214ENST00000572365 CMC4P56277 68 aaPredicted RBP3.47□□□□□ -1.85
SF3B3-214ENST00000572365 KRTAP10-5P60370 271 aa3.47□□□□□ -1.85
SF3B3-214ENST00000572365 HIST1H4AP62805 103 aaKnown RBP3.47□□□□□ -1.85
SF3B3-214ENST00000572365 ESRGQ1W209 222 aa3.47□□□□□ -1.85
SF3B3-214ENST00000572365 SDIM1Q6ZPB5 146 aa3.47□□□□□ -1.85
SF3B3-214ENST00000572365 Q6ZRN7 208 aaPredicted RBP3.47□□□□□ -1.85
SF3B3-214ENST00000572365 TOMM6Q96B49 74 aa3.47□□□□□ -1.85
SF3B3-214ENST00000572365 SHANK2-AS3Q9BTD1 123 aa3.47□□□□□ -1.85
SF3B3-214ENST00000572365 A0A087WTM6 91 aa3.46□□□□□ -1.86
SF3B3-214ENST00000572365 TMSB15BA0A087X1C1 80 aa3.46□□□□□ -1.86
SF3B3-214ENST00000572365 TRAV3A0A0B4J244 114 aa3.46□□□□□ -1.86
SF3B3-214ENST00000572365 A0A0J9YXY3 114 aa3.46□□□□□ -1.86
SF3B3-214ENST00000572365 A0A0J9YY99 117 aa3.46□□□□□ -1.86
SF3B3-214ENST00000572365 hADV29S1A0JD25 119 aa3.46□□□□□ -1.86
SF3B3-214ENST00000572365 KLLNB2CW77 178 aa3.46□□□□□ -1.86
SF3B3-214ENST00000572365 M0R381 172 aa3.46□□□□□ -1.86
SF3B3-214ENST00000572365 M0R3E3 92 aa3.46□□□□□ -1.86
SF3B3-214ENST00000572365 NDUFA4O00483 81 aa3.46□□□□□ -1.86
SF3B3-214ENST00000572365 OXTP01178 125 aa3.46□□□□□ -1.86
SF3B3-214ENST00000572365 IGHV3-30P01768 117 aa3.46□□□□□ -1.86
SF3B3-214ENST00000572365 IGHV3-30-5P0DP03 117 aa3.46□□□□□ -1.86
SF3B3-214ENST00000572365 PFN2P35080 140 aa3.46□□□□□ -1.86
SF3B3-214ENST00000572365 LYZP61626 148 aa3.46□□□□□ -1.86
SF3B3-214ENST00000572365 SPINK9Q5DT21 86 aa3.46□□□□□ -1.86
SF3B3-214ENST00000572365 LELP1Q5T871 98 aa3.46□□□□□ -1.86
SF3B3-214ENST00000572365 Q6ZQT7 251 aa3.46□□□□□ -1.86
SF3B3-214ENST00000572365 NKAPP1Q8N9T2 125 aa3.46□□□□□ -1.86
SF3B3-214ENST00000572365 SLC50A1Q9BRV3 221 aa3.46□□□□□ -1.86
SF3B3-214ENST00000572365 TRBV10-3A0A0K0K1G6 114 aa3.45□□□□□ -1.86
SF3B3-214ENST00000572365 TEX49A0A1B0GTD5 131 aa3.45□□□□□ -1.86
SF3B3-214ENST00000572365 J3QQQ9 107 aa3.45□□□□□ -1.86
SF3B3-214ENST00000572365 K7EMT4 169 aa3.45□□□□□ -1.86
SF3B3-214ENST00000572365 LST1O00453 97 aa3.45□□□□□ -1.86
SF3B3-214ENST00000572365 MRPS12O15235 138 aaKnown RBP3.45□□□□□ -1.86
SF3B3-214ENST00000572365 CTSGP08311 255 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms