RNA–Protein interactions for RNA: ENST00000571643.5

CDC27-213, Transcript of cell division cycle 27, humanhuman

TSL 3

Gene CDC27, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-213ENST00000571643 SMDT1Q9H4I9 107 aa2.24□□□□□ -2.05
CDC27-213ENST00000571643 NHP2Q9NX24 153 aaKnown RBP2.24□□□□□ -2.05
CDC27-213ENST00000571643 PRKDCP78527 4128 aaKnown RBP2.23□□□□□ -2.05
CDC27-213ENST00000571643 FXYD6-FXYD2A0A087WZ82 144 aa2.23□□□□□ -2.05
CDC27-213ENST00000571643 TRAV10A0A0B4J240 114 aa2.23□□□□□ -2.05
CDC27-213ENST00000571643 TRAV1-1A0A0B4J248 108 aa2.23□□□□□ -2.05
CDC27-213ENST00000571643 LCE6AA0A183 80 aa2.23□□□□□ -2.05
CDC27-213ENST00000571643 CTXND1A0A1B0GTU2 59 aa2.23□□□□□ -2.05
CDC27-213ENST00000571643 KANTRA0A1W2PQU2 76 aa2.23□□□□□ -2.05
CDC27-213ENST00000571643 H3BNG1 76 aa2.23□□□□□ -2.05
CDC27-213ENST00000571643 LECT2O14960 151 aa2.23□□□□□ -2.05
CDC27-213ENST00000571643 FUSP35637 526 aaKnown RBP eCLIP2.23□□□□□ -2.05
CDC27-213ENST00000571643 NPC2P61916 151 aa2.23□□□□□ -2.05
CDC27-213ENST00000571643 UBE2L3P68036 154 aaKnown RBP2.23□□□□□ -2.05
CDC27-213ENST00000571643 SYCNQ0VAF6 134 aa2.23□□□□□ -2.05
CDC27-213ENST00000571643 TDRG1Q3Y452 100 aa2.23□□□□□ -2.05
CDC27-213ENST00000571643 GDF5OSQ5U4N7 250 aa2.23□□□□□ -2.05
CDC27-213ENST00000571643 SOSTDC1Q6X4U4 206 aa2.23□□□□□ -2.05
CDC27-213ENST00000571643 SDIM1Q6ZPB5 146 aa2.23□□□□□ -2.05
CDC27-213ENST00000571643 CEND1Q8N111 149 aa2.23□□□□□ -2.05
CDC27-213ENST00000571643 CMTM2Q8TAZ6 248 aa2.23□□□□□ -2.05
CDC27-213ENST00000571643 CIRBP-AS1Q8TBR5 109 aa2.23□□□□□ -2.05
CDC27-213ENST00000571643 TMEM263Q8WUH6 116 aaKnown RBP2.23□□□□□ -2.05
CDC27-213ENST00000571643 TXNDC17Q9BRA2 123 aa2.23□□□□□ -2.05
CDC27-213ENST00000571643 TIMM8BQ9Y5J9 83 aaPredicted RBP2.23□□□□□ -2.05
CDC27-213ENST00000571643 TRBV6-1A0A0K0K1D8 114 aa2.22□□□□□ -2.05
CDC27-213ENST00000571643 SNCGO76070 127 aa2.22□□□□□ -2.05
CDC27-213ENST00000571643 GCHFRP30047 84 aa2.22□□□□□ -2.05
CDC27-213ENST00000571643 ATP5EP56381 51 aaPredicted RBP2.22□□□□□ -2.05
CDC27-213ENST00000571643 CIRBPQ14011 172 aaKnown RBP2.22□□□□□ -2.05
CDC27-213ENST00000571643 SPINK13Q1W4C9 94 aa2.22□□□□□ -2.05
CDC27-213ENST00000571643 RPL7L1Q6DKI1 246 aaKnown RBP2.22□□□□□ -2.05
CDC27-213ENST00000571643 MIR7-3HGQ8N6C7 128 aa2.22□□□□□ -2.05
CDC27-213ENST00000571643 C15orf53Q8NAA6 179 aa2.22□□□□□ -2.05
CDC27-213ENST00000571643 UBE2WQ96B02 151 aa2.22□□□□□ -2.05
CDC27-213ENST00000571643 CYTL1Q9NRR1 136 aa2.22□□□□□ -2.05
CDC27-213ENST00000571643 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.21□□□□□ -2.06
CDC27-213ENST00000571643 DEFB131BA0A096LNP1 70 aa2.21□□□□□ -2.06
CDC27-213ENST00000571643 IGHV3-73A0A0B4J1V6 119 aa2.21□□□□□ -2.06
CDC27-213ENST00000571643 TRAV21A0A0B4J279 112 aa2.21□□□□□ -2.06
CDC27-213ENST00000571643 F8W1H4 67 aa2.21□□□□□ -2.06
CDC27-213ENST00000571643 M0R3E3 92 aa2.21□□□□□ -2.06
CDC27-213ENST00000571643 ARL14EPLP0DKL9 152 aa2.21□□□□□ -2.06
CDC27-213ENST00000571643 COX7CP15954 63 aa2.21□□□□□ -2.06
CDC27-213ENST00000571643 ADCYAP1P18509 176 aa2.21□□□□□ -2.06
CDC27-213ENST00000571643 CKS2P33552 79 aa2.21□□□□□ -2.06
CDC27-213ENST00000571643 ASIPP42127 132 aa2.21□□□□□ -2.06
CDC27-213ENST00000571643 XCL1P47992 114 aa2.21□□□□□ -2.06
CDC27-213ENST00000571643 ATP11AUNQ6ZP68 121 aa2.21□□□□□ -2.06
CDC27-213ENST00000571643 Q6ZQT7 251 aa2.21□□□□□ -2.06
CDC27-213ENST00000571643 CYB561D1Q8N8Q1 229 aa2.21□□□□□ -2.06
CDC27-213ENST00000571643 CHCHD1Q96BP2 118 aaKnown RBP2.21□□□□□ -2.06
CDC27-213ENST00000571643 MANBALQ9NQG1 85 aa2.21□□□□□ -2.06
CDC27-213ENST00000571643 TMEM242Q9NWH2 141 aa2.21□□□□□ -2.06
CDC27-213ENST00000571643 ICOSQ9Y6W8 199 aa2.21□□□□□ -2.06
CDC27-213ENST00000571643 DNAH9Q9NYC9 4486 aa2.21□□□□□ -2.06
CDC27-213ENST00000571643 TENM2Q9NT68 2774 aa2.2□□□□□ -2.06
CDC27-213ENST00000571643 TRAV12-3A0A0B4J271 114 aa2.2□□□□□ -2.06
CDC27-213ENST00000571643 K7EP34 96 aa2.2□□□□□ -2.06
CDC27-213ENST00000571643 TIMM17BO60830 172 aa2.2□□□□□ -2.06
CDC27-213ENST00000571643 MT-ATP8P03928 68 aa2.2□□□□□ -2.06
CDC27-213ENST00000571643 SS18Q15532 418 aa2.2□□□□□ -2.06
CDC27-213ENST00000571643 TSKUQ8WUA8 353 aa2.2□□□□□ -2.06
CDC27-213ENST00000571643 CLEC2BQ92478 149 aa2.2□□□□□ -2.06
CDC27-213ENST00000571643 UQCR10Q9UDW1 63 aa2.2□□□□□ -2.06
CDC27-213ENST00000571643 APLNQ9ULZ1 77 aa2.2□□□□□ -2.06
CDC27-213ENST00000571643 IGKV2-40A0A087WW87 121 aaPredicted RBP2.19□□□□□ -2.06
CDC27-213ENST00000571643 C19orf71A6NCJ1 209 aa2.19□□□□□ -2.06
CDC27-213ENST00000571643 DEFB4AO15263 64 aa2.19□□□□□ -2.06
CDC27-213ENST00000571643 SPINK4O60575 86 aa2.19□□□□□ -2.06
CDC27-213ENST00000571643 IGKV2D-40P01614 121 aaPredicted RBP2.19□□□□□ -2.06
CDC27-213ENST00000571643 FXYD2P54710 66 aa2.19□□□□□ -2.06
CDC27-213ENST00000571643 DEFB1P60022 68 aa2.19□□□□□ -2.06
CDC27-213ENST00000571643 UBE2G1P62253 170 aa2.19□□□□□ -2.06
CDC27-213ENST00000571643 ALKAL2Q6UX46 152 aa2.19□□□□□ -2.06
CDC27-213ENST00000571643 ADM2Q7Z4H4 148 aa2.19□□□□□ -2.06
CDC27-213ENST00000571643 SPANXA2-OT1Q8N9U9 137 aa2.19□□□□□ -2.06
CDC27-213ENST00000571643 IMMP2LQ96T52 175 aa2.19□□□□□ -2.06
CDC27-213ENST00000571643 PRO0255Q9UI72 69 aa2.19□□□□□ -2.06
CDC27-213ENST00000571643 LY96Q9Y6Y9 160 aa2.19□□□□□ -2.06
CDC27-213ENST00000571643 TRGV2A0A075B6R0 118 aa2.18□□□□□ -2.06
CDC27-213ENST00000571643 A0A0B4J2C4 111 aa2.18□□□□□ -2.06
CDC27-213ENST00000571643 MUC21A0A0G2JKD1 596 aa2.18□□□□□ -2.06
CDC27-213ENST00000571643 H3BPC8 53 aa2.18□□□□□ -2.06
CDC27-213ENST00000571643 DEFB130BP0DP73 79 aa2.18□□□□□ -2.06
CDC27-213ENST00000571643 DEFB130AP0DP74 79 aa2.18□□□□□ -2.06
CDC27-213ENST00000571643 RPL28P46779 137 aaKnown RBP2.18□□□□□ -2.06
CDC27-213ENST00000571643 CCL18P55774 89 aa2.18□□□□□ -2.06
CDC27-213ENST00000571643 C2orf91Q6ZV80 131 aa2.18□□□□□ -2.06
CDC27-213ENST00000571643 Q86TA4 180 aa2.18□□□□□ -2.06
CDC27-213ENST00000571643 FAM213BQ8TBF2 198 aa2.18□□□□□ -2.06
CDC27-213ENST00000571643 RETNLBQ9BQ08 111 aa2.18□□□□□ -2.06
CDC27-213ENST00000571643 NOP10Q9NPE3 64 aaKnown RBP2.18□□□□□ -2.06
CDC27-213ENST00000571643 MUC4Q99102 2169 aa2.17□□□□□ -2.06
CDC27-213ENST00000571643 HUWE1Q7Z6Z7 4374 aaKnown RBP2.17□□□□□ -2.06
CDC27-213ENST00000571643 TRGV1A0A0A0MS02 117 aa2.17□□□□□ -2.06
CDC27-213ENST00000571643 IGHV1-24A0A0C4DH33 117 aa2.17□□□□□ -2.06
CDC27-213ENST00000571643 TRBV10-2A0A0K0K1G8 114 aa2.17□□□□□ -2.06
CDC27-213ENST00000571643 TRBV6-4A0A1B0GX49 114 aa2.17□□□□□ -2.06
CDC27-213ENST00000571643 C7orf77A4D0Y5 90 aa2.17□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms