RNA–Protein interactions for RNA: ENST00000571409.1

CTDNEP1-206, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 741 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-206ENST00000571409 H0Y8G0 127 aa17.95■□□□□ 0.46
CTDNEP1-206ENST00000571409 TMEM126AQ9H061 195 aa17.95■□□□□ 0.46
CTDNEP1-206ENST00000571409 TMEM238C9JI98 176 aa17.94■□□□□ 0.46
CTDNEP1-206ENST00000571409 CRYGAP11844 174 aa17.94■□□□□ 0.46
CTDNEP1-206ENST00000571409 SLC7A5P1Q8MH63 180 aa17.94■□□□□ 0.46
CTDNEP1-206ENST00000571409 PRLHP81277 87 aa17.93■□□□□ 0.46
CTDNEP1-206ENST00000571409 FAM19A1Q7Z5A9 133 aa17.93■□□□□ 0.46
CTDNEP1-206ENST00000571409 SERF1AO75920 110 aa17.92■□□□□ 0.46
CTDNEP1-206ENST00000571409 LINC00310P59036 64 aa17.92■□□□□ 0.46
CTDNEP1-206ENST00000571409 ANAPC11Q9NYG5 84 aa17.92■□□□□ 0.46
CTDNEP1-206ENST00000571409 LEPROTL1O95214 131 aa17.91■□□□□ 0.46
CTDNEP1-206ENST00000571409 M0R378 163 aa17.9■□□□□ 0.46
CTDNEP1-206ENST00000571409 SMIM13P0DJ93 91 aa17.9■□□□□ 0.46
CTDNEP1-206ENST00000571409 MEIG1Q5JSS6 88 aa17.9■□□□□ 0.46
CTDNEP1-206ENST00000571409 TYMSOSQ8TAI1 123 aa17.9■□□□□ 0.46
CTDNEP1-206ENST00000571409 ATP6V1G1O75348 118 aa17.88■□□□□ 0.45
CTDNEP1-206ENST00000571409 RNF213Q63HN8 5207 aa17.88■□□□□ 0.45
CTDNEP1-206ENST00000571409 LPAP08519 4548 aa17.88■□□□□ 0.45
CTDNEP1-206ENST00000571409 HERV-K104P63124 156 aa17.87■□□□□ 0.45
CTDNEP1-206ENST00000571409 NDUFA12Q9UI09 145 aa17.86■□□□□ 0.45
CTDNEP1-206ENST00000571409 TSPAN13O95857 204 aa17.85■□□□□ 0.45
CTDNEP1-206ENST00000571409 PRR4Q16378 134 aa17.85■□□□□ 0.45
CTDNEP1-206ENST00000571409 MIR7-3HGQ8N6C7 128 aa17.84■□□□□ 0.45
CTDNEP1-206ENST00000571409 COLCA2A8K830 154 aa17.83■□□□□ 0.44
CTDNEP1-206ENST00000571409 KRTAP13-2Q52LG2 175 aa17.83■□□□□ 0.44
CTDNEP1-206ENST00000571409 MYMXA0A1B0GTQ4 84 aa17.82■□□□□ 0.44
CTDNEP1-206ENST00000571409 FAM229BQ4G0N7 80 aa17.82■□□□□ 0.44
CTDNEP1-206ENST00000571409 BOD1L2Q8IYS8 172 aa17.82■□□□□ 0.44
CTDNEP1-206ENST00000571409 HSPB8Q9UJY1 196 aa17.82■□□□□ 0.44
CTDNEP1-206ENST00000571409 LINC00587B1AMM8 73 aa17.81■□□□□ 0.44
CTDNEP1-206ENST00000571409 FABP4P15090 132 aa17.81■□□□□ 0.44
CTDNEP1-206ENST00000571409 PLNP26678 52 aa17.8■□□□□ 0.44
CTDNEP1-206ENST00000571409 TSPEAR-AS2P59090 65 aa17.79■□□□□ 0.44
CTDNEP1-206ENST00000571409 LEPROTO15243 131 aa17.78■□□□□ 0.44
CTDNEP1-206ENST00000571409 NCR3O14931 201 aa17.77■□□□□ 0.44
CTDNEP1-206ENST00000571409 MAP1LC3CQ9BXW4 147 aa17.77■□□□□ 0.44
CTDNEP1-206ENST00000571409 PLEKHB2Q96CS7 222 aa17.76■□□□□ 0.43
CTDNEP1-206ENST00000571409 HIGD2AQ9BW72 106 aa17.76■□□□□ 0.43
CTDNEP1-206ENST00000571409 DPM2O94777 84 aa17.75■□□□□ 0.43
CTDNEP1-206ENST00000571409 PMCHL2Q9BQD1 86 aa17.75■□□□□ 0.43
CTDNEP1-206ENST00000571409 IGKV2D-26A0A0A0MRZ7 120 aa17.73■□□□□ 0.43
CTDNEP1-206ENST00000571409 PRYO14603 147 aa17.72■□□□□ 0.43
CTDNEP1-206ENST00000571409 HERVK_113P61574 105 aa17.72■□□□□ 0.43
CTDNEP1-206ENST00000571409 J3QQQ9 107 aa17.71■□□□□ 0.43
CTDNEP1-206ENST00000571409 IGKCP01834 107 aa17.71■□□□□ 0.43
CTDNEP1-206ENST00000571409 DAND5Q8N907 189 aa17.69■□□□□ 0.42
CTDNEP1-206ENST00000571409 LINC00304Q8N9R0 145 aa17.69■□□□□ 0.42
CTDNEP1-206ENST00000571409 KCNQ1DNQ9H478 68 aa17.67■□□□□ 0.42
CTDNEP1-206ENST00000571409 LGALS3P17931 250 aaKnown RBP17.66■□□□□ 0.42
CTDNEP1-206ENST00000571409 NMUP48645 174 aa17.66■□□□□ 0.42
CTDNEP1-206ENST00000571409 TRBV10-3A0A0K0K1G6 114 aa17.65■□□□□ 0.42
CTDNEP1-206ENST00000571409 SPRR1AP35321 89 aa17.65■□□□□ 0.42
CTDNEP1-206ENST00000571409 LINC00337Q8N6G1 96 aa17.65■□□□□ 0.42
CTDNEP1-206ENST00000571409 SPRR4Q96PI1 79 aa17.64■□□□□ 0.41
CTDNEP1-206ENST00000571409 LOC107984156A0A0G2JMH3 177 aa17.63■□□□□ 0.41
CTDNEP1-206ENST00000571409 ARL17AQ8IVW1 177 aa17.63■□□□□ 0.41
CTDNEP1-206ENST00000571409 C3orf22Q8N5N4 141 aa17.63■□□□□ 0.41
CTDNEP1-206ENST00000571409 ETDCA0A1B0GVM5 59 aa17.61■□□□□ 0.41
CTDNEP1-206ENST00000571409 KRTAP4-16G5E9R7 235 aaPredicted RBP17.6■□□□□ 0.41
CTDNEP1-206ENST00000571409 ZNF706Q9Y5V0 76 aaPredicted RBP17.6■□□□□ 0.41
CTDNEP1-206ENST00000571409 HIST1H2BKO60814 126 aa17.59■□□□□ 0.41
CTDNEP1-206ENST00000571409 HIST1H2BJP06899 126 aa17.59■□□□□ 0.41
CTDNEP1-206ENST00000571409 HIST1H2BOP23527 126 aa17.59■□□□□ 0.41
CTDNEP1-206ENST00000571409 HIST1H2BBP33778 126 aa17.59■□□□□ 0.41
CTDNEP1-206ENST00000571409 HIST1H2BDP58876 126 aa17.59■□□□□ 0.41
CTDNEP1-206ENST00000571409 HIST1H2BCP62807 126 aa17.59■□□□□ 0.41
CTDNEP1-206ENST00000571409 S100A12P80511 92 aa17.59■□□□□ 0.41
CTDNEP1-206ENST00000571409 HIST2H2BEQ16778 126 aa17.59■□□□□ 0.41
CTDNEP1-206ENST00000571409 HIST2H2BFQ5QNW6 126 aaPredicted RBP17.59■□□□□ 0.41
CTDNEP1-206ENST00000571409 HIST1H2BHQ93079 126 aa17.59■□□□□ 0.41
CTDNEP1-206ENST00000571409 HIST1H2BNQ99877 126 aa17.59■□□□□ 0.41
CTDNEP1-206ENST00000571409 HIST1H2BMQ99879 126 aa17.59■□□□□ 0.41
CTDNEP1-206ENST00000571409 MIEN1Q9BRT3 115 aa17.59■□□□□ 0.41
CTDNEP1-206ENST00000571409 TRBV10-2A0A0K0K1G8 114 aa17.57■□□□□ 0.4
CTDNEP1-206ENST00000571409 RETNLBQ9BQ08 111 aa17.57■□□□□ 0.4
CTDNEP1-206ENST00000571409 DDTP30046 118 aa17.56■□□□□ 0.4
CTDNEP1-206ENST00000571409 SMCR5Q8TEV8 140 aa17.56■□□□□ 0.4
CTDNEP1-206ENST00000571409 E9PLD3 99 aa17.55■□□□□ 0.4
CTDNEP1-206ENST00000571409 SYS1-DBNDD2H3BUS1 97 aa17.54■□□□□ 0.4
CTDNEP1-206ENST00000571409 SPANXB1Q9NS25 103 aaPredicted RBP17.54■□□□□ 0.4
CTDNEP1-206ENST00000571409 A0A0J9YXY3 114 aa17.52■□□□□ 0.4
CTDNEP1-206ENST00000571409 NDUFC2O95298 119 aa17.51■□□□□ 0.39
CTDNEP1-206ENST00000571409 CTAG1AP78358 180 aa17.51■□□□□ 0.39
CTDNEP1-206ENST00000571409 B5MCH6 92 aa17.5■□□□□ 0.39
CTDNEP1-206ENST00000571409 NPC2P61916 151 aa17.5■□□□□ 0.39
CTDNEP1-206ENST00000571409 ADAMTSL4-AS1Q5T5F5 129 aa17.49■□□□□ 0.39
CTDNEP1-206ENST00000571409 PPDPFQ9H3Y8 114 aa17.49■□□□□ 0.39
CTDNEP1-206ENST00000571409 S100A7L2Q5SY68 101 aa17.48■□□□□ 0.39
CTDNEP1-206ENST00000571409 SOSTDC1Q6X4U4 206 aa17.48■□□□□ 0.39
CTDNEP1-206ENST00000571409 EIF4EBP3O60516 100 aaPredicted RBP17.46■□□□□ 0.39
CTDNEP1-206ENST00000571409 LINC01545Q5VT33 79 aa17.46■□□□□ 0.39
CTDNEP1-206ENST00000571409 IGLV6-57P01721 117 aa17.45■□□□□ 0.38
CTDNEP1-206ENST00000571409 SPAG11AQ6PDA7 123 aa17.45■□□□□ 0.38
CTDNEP1-206ENST00000571409 PET117Q6UWS5 81 aa17.44■□□□□ 0.38
CTDNEP1-206ENST00000571409 ERC2-IT1O76042 136 aa17.42■□□□□ 0.38
CTDNEP1-206ENST00000571409 LINC00483Q53H64 154 aa17.42■□□□□ 0.38
CTDNEP1-206ENST00000571409 GAGE2AQ6NT46 116 aa17.42■□□□□ 0.38
CTDNEP1-206ENST00000571409 Q6ZRX8 168 aa17.42■□□□□ 0.38
CTDNEP1-206ENST00000571409 Q9BRP9 147 aa17.42■□□□□ 0.38
CTDNEP1-206ENST00000571409 TRAV23DV6A0A075B6W5 121 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 182 ms