RNA–Protein interactions for RNA: ENST00000569569.5

HERPUD1-218, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 1,125 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-218ENST00000569569 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.46□□□□□ -1.06
HERPUD1-218ENST00000569569 HIST1H2BHQ93079 126 aa8.46□□□□□ -1.06
HERPUD1-218ENST00000569569 ZNF625Q96I27 306 aaPredicted RBP8.46□□□□□ -1.06
HERPUD1-218ENST00000569569 LINC01600Q96MT4 127 aa8.46□□□□□ -1.06
HERPUD1-218ENST00000569569 HIST1H2BNQ99877 126 aa8.46□□□□□ -1.06
HERPUD1-218ENST00000569569 HIST1H2BMQ99879 126 aa8.46□□□□□ -1.06
HERPUD1-218ENST00000569569 MT1HL1P0DM35 61 aa8.45□□□□□ -1.06
HERPUD1-218ENST00000569569 MRPL55Q7Z7F7 128 aaKnown RBP8.45□□□□□ -1.06
HERPUD1-218ENST00000569569 IGLV5-37A0A075B6J1 123 aa8.43□□□□□ -1.06
HERPUD1-218ENST00000569569 PLNP26678 52 aa8.43□□□□□ -1.06
HERPUD1-218ENST00000569569 LINC00167Q96N53 147 aa8.43□□□□□ -1.06
HERPUD1-218ENST00000569569 MAP1LC3CQ9BXW4 147 aa8.43□□□□□ -1.06
HERPUD1-218ENST00000569569 SND1-IT1Q9HBX3 110 aa8.43□□□□□ -1.06
HERPUD1-218ENST00000569569 EIF4EBP3O60516 100 aaPredicted RBP8.42□□□□□ -1.06
HERPUD1-218ENST00000569569 NKAPP1Q8N9T2 125 aa8.42□□□□□ -1.06
HERPUD1-218ENST00000569569 DIRC1Q969H9 104 aa8.42□□□□□ -1.06
HERPUD1-218ENST00000569569 DPM2O94777 84 aa8.41□□□□□ -1.06
HERPUD1-218ENST00000569569 IGKCP01834 107 aa8.41□□□□□ -1.06
HERPUD1-218ENST00000569569 LINC00158P58513 81 aa8.41□□□□□ -1.06
HERPUD1-218ENST00000569569 HERV-K104P63124 156 aa8.4□□□□□ -1.06
HERPUD1-218ENST00000569569 RPL24P83731 157 aaKnown RBP8.4□□□□□ -1.06
HERPUD1-218ENST00000569569 PMCHL2Q9BQD1 86 aa8.4□□□□□ -1.06
HERPUD1-218ENST00000569569 TNXBP22105 4242 aa8.4□□□□□ -1.06
HERPUD1-218ENST00000569569 MYMXA0A1B0GTQ4 84 aa8.39□□□□□ -1.07
HERPUD1-218ENST00000569569 GAGE10A6NGK3 116 aa8.39□□□□□ -1.07
HERPUD1-218ENST00000569569 RPL37AP8A6NKH3 93 aa8.39□□□□□ -1.07
HERPUD1-218ENST00000569569 LINC00587B1AMM8 73 aa8.39□□□□□ -1.07
HERPUD1-218ENST00000569569 H0Y9J4 135 aa8.39□□□□□ -1.07
HERPUD1-218ENST00000569569 LEPROTO15243 131 aa8.39□□□□□ -1.07
HERPUD1-218ENST00000569569 HERVK_113P61574 105 aa8.39□□□□□ -1.07
HERPUD1-218ENST00000569569 PLEKHB2Q96CS7 222 aa8.39□□□□□ -1.07
HERPUD1-218ENST00000569569 NDUFA12Q9UI09 145 aa8.39□□□□□ -1.07
HERPUD1-218ENST00000569569 A0A0U1RRA0 63 aa8.38□□□□□ -1.07
HERPUD1-218ENST00000569569 ZNF861PO60384 105 aa8.38□□□□□ -1.07
HERPUD1-218ENST00000569569 ATP6V1G1O75348 118 aa8.38□□□□□ -1.07
HERPUD1-218ENST00000569569 VPREB1P12018 145 aa8.38□□□□□ -1.07
HERPUD1-218ENST00000569569 KRTAP10-8P60410 259 aa8.38□□□□□ -1.07
HERPUD1-218ENST00000569569 MEIG1Q5JSS6 88 aa8.38□□□□□ -1.07
HERPUD1-218ENST00000569569 SYS1-DBNDD2H3BUS1 97 aa8.37□□□□□ -1.07
HERPUD1-218ENST00000569569 SMIM13P0DJ93 91 aa8.37□□□□□ -1.07
HERPUD1-218ENST00000569569 S100A1P23297 94 aa8.37□□□□□ -1.07
HERPUD1-218ENST00000569569 COA6Q5JTJ3 125 aaKnown RBP8.37□□□□□ -1.07
HERPUD1-218ENST00000569569 J3QQQ9 107 aa8.36□□□□□ -1.07
HERPUD1-218ENST00000569569 BCE1O60756 84 aa8.36□□□□□ -1.07
HERPUD1-218ENST00000569569 TSPEAR-AS2P59090 65 aa8.35□□□□□ -1.07
HERPUD1-218ENST00000569569 IGLV1-50A0A075B6I6 118 aa8.34□□□□□ -1.07
HERPUD1-218ENST00000569569 IGKV2-28A0A075B6P5 120 aa8.34□□□□□ -1.07
HERPUD1-218ENST00000569569 IGKV2D-28P01615 120 aa8.34□□□□□ -1.07
HERPUD1-218ENST00000569569 LGALS3P17931 250 aaKnown RBP8.34□□□□□ -1.07
HERPUD1-218ENST00000569569 RPL28P46779 137 aaKnown RBP8.34□□□□□ -1.07
HERPUD1-218ENST00000569569 NMUP48645 174 aa8.34□□□□□ -1.07
HERPUD1-218ENST00000569569 PET117Q6UWS5 81 aa8.34□□□□□ -1.07
HERPUD1-218ENST00000569569 MIR7-3HGQ8N6C7 128 aa8.34□□□□□ -1.07
HERPUD1-218ENST00000569569 LINC01545Q5VT33 79 aa8.33□□□□□ -1.08
HERPUD1-218ENST00000569569 Q8NDZ9 215 aa8.33□□□□□ -1.08
HERPUD1-218ENST00000569569 E9PLD3 99 aa8.32□□□□□ -1.08
HERPUD1-218ENST00000569569 KRTAP1-4P0C5Y4 121 aa8.31□□□□□ -1.08
HERPUD1-218ENST00000569569 C3orf79P0CE67 100 aa8.31□□□□□ -1.08
HERPUD1-218ENST00000569569 BOD1L2Q8IYS8 172 aa8.31□□□□□ -1.08
HERPUD1-218ENST00000569569 M0R378 163 aa8.3□□□□□ -1.08
HERPUD1-218ENST00000569569 UBE2AP49459 152 aa8.3□□□□□ -1.08
HERPUD1-218ENST00000569569 PRR26Q8N8Z3 221 aa8.3□□□□□ -1.08
HERPUD1-218ENST00000569569 TMA7Q9Y2S6 64 aaKnown RBP8.3□□□□□ -1.08
HERPUD1-218ENST00000569569 TMEM126AQ9H061 195 aa8.29□□□□□ -1.08
HERPUD1-218ENST00000569569 IGKV2D-26A0A0A0MRZ7 120 aa8.28□□□□□ -1.08
HERPUD1-218ENST00000569569 LOC107984156A0A0G2JMH3 177 aa8.28□□□□□ -1.08
HERPUD1-218ENST00000569569 TMEM238C9JI98 176 aa8.28□□□□□ -1.08
HERPUD1-218ENST00000569569 KRTDAPP60985 99 aa8.28□□□□□ -1.08
HERPUD1-218ENST00000569569 KRTAP13-1Q8IUC0 172 aa8.28□□□□□ -1.08
HERPUD1-218ENST00000569569 ARL17AQ8IVW1 177 aa8.28□□□□□ -1.08
HERPUD1-218ENST00000569569 DAND5Q8N907 189 aa8.28□□□□□ -1.08
HERPUD1-218ENST00000569569 LCE3BQ5TA77 95 aa8.27□□□□□ -1.09
HERPUD1-218ENST00000569569 FAM19A1Q7Z5A9 133 aa8.27□□□□□ -1.09
HERPUD1-218ENST00000569569 A0A0J9YXY3 114 aa8.26□□□□□ -1.09
HERPUD1-218ENST00000569569 C20orf202A1L168 122 aa8.25□□□□□ -1.09
HERPUD1-218ENST00000569569 NCR3O14931 201 aa8.25□□□□□ -1.09
HERPUD1-218ENST00000569569 RPL13AP40429 203 aaKnown RBP8.25□□□□□ -1.09
HERPUD1-218ENST00000569569 MIEN1Q9BRT3 115 aa8.25□□□□□ -1.09
HERPUD1-218ENST00000569569 PRLHP81277 87 aa8.24□□□□□ -1.09
HERPUD1-218ENST00000569569 PRYO14603 147 aa8.23□□□□□ -1.09
HERPUD1-218ENST00000569569 KCNQ1DNQ9H478 68 aa8.23□□□□□ -1.09
HERPUD1-218ENST00000569569 HMCN2Q8NDA2 5059 aa8.22□□□□□ -1.09
HERPUD1-218ENST00000569569 TRBV10-2A0A0K0K1G8 114 aa8.22□□□□□ -1.09
HERPUD1-218ENST00000569569 NDUFC2O95298 119 aa8.22□□□□□ -1.09
HERPUD1-218ENST00000569569 AKR1D1P51857 326 aa8.22□□□□□ -1.09
HERPUD1-218ENST00000569569 S100A12P80511 92 aa8.22□□□□□ -1.09
HERPUD1-218ENST00000569569 ADAMTSL4-AS1Q5T5F5 129 aa8.22□□□□□ -1.09
HERPUD1-218ENST00000569569 TRBV10-3A0A0K0K1G6 114 aa8.21□□□□□ -1.1
HERPUD1-218ENST00000569569 ZNF815PA8K554 130 aa8.21□□□□□ -1.1
HERPUD1-218ENST00000569569 TIMM17BO60830 172 aa8.21□□□□□ -1.1
HERPUD1-218ENST00000569569 CRYGAP11844 174 aa8.21□□□□□ -1.1
HERPUD1-218ENST00000569569 S100A2P29034 98 aa8.21□□□□□ -1.1
HERPUD1-218ENST00000569569 S100A6P06703 90 aa8.2□□□□□ -1.1
HERPUD1-218ENST00000569569 SPRR1AP35321 89 aa8.2□□□□□ -1.1
HERPUD1-218ENST00000569569 NPC2P61916 151 aa8.2□□□□□ -1.1
HERPUD1-218ENST00000569569 SOSTDC1Q6X4U4 206 aa8.2□□□□□ -1.1
HERPUD1-218ENST00000569569 HIST3H2BBQ8N257 126 aa8.2□□□□□ -1.1
HERPUD1-218ENST00000569569 LINC00337Q8N6G1 96 aa8.2□□□□□ -1.1
HERPUD1-218ENST00000569569 SPANXB1Q9NS25 103 aaPredicted RBP8.2□□□□□ -1.1
HERPUD1-218ENST00000569569 A0A087X002 238 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms