RNA–Protein interactions for RNA: ENST00000568796.1

PKD1-236, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 3

Gene PKD1, Length 447 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-236ENST00000568796 LINC01547P58512 204 aaPredicted RBP8.75□□□□□ -1.01
PKD1-236ENST00000568796 IGLV5-39A0A0G2JS06 123 aa8.74□□□□□ -1.01
PKD1-236ENST00000568796 IGLC3P0DOY3 106 aa8.74□□□□□ -1.01
PKD1-236ENST00000568796 COX17Q14061 63 aa8.74□□□□□ -1.01
PKD1-236ENST00000568796 Q8NDZ9 215 aa8.74□□□□□ -1.01
PKD1-236ENST00000568796 SPRR4Q96PI1 79 aa8.74□□□□□ -1.01
PKD1-236ENST00000568796 LINC01546A6NGU7 62 aa8.73□□□□□ -1.01
PKD1-236ENST00000568796 DAND5Q8N907 189 aa8.73□□□□□ -1.01
PKD1-236ENST00000568796 APOC3P02656 99 aa8.72□□□□□ -1.01
PKD1-236ENST00000568796 ZNF22P17026 224 aaPredicted RBP8.72□□□□□ -1.01
PKD1-236ENST00000568796 SVBPQ8N300 66 aa8.72□□□□□ -1.01
PKD1-236ENST00000568796 Q8NBF4 154 aa8.72□□□□□ -1.01
PKD1-236ENST00000568796 ZNF706Q9Y5V0 76 aaPredicted RBP8.72□□□□□ -1.01
PKD1-236ENST00000568796 SNAPINO95295 136 aa8.71□□□□□ -1.02
PKD1-236ENST00000568796 KRTAP13-3Q3SY46 172 aa8.71□□□□□ -1.02
PKD1-236ENST00000568796 ASB16-AS1Q495Z4 193 aa8.71□□□□□ -1.02
PKD1-236ENST00000568796 TRAV9-1A0A075B6T8 112 aa8.7□□□□□ -1.02
PKD1-236ENST00000568796 LINC00158P58513 81 aa8.7□□□□□ -1.02
PKD1-236ENST00000568796 A0A0U1RRA0 63 aa8.69□□□□□ -1.02
PKD1-236ENST00000568796 S100PP25815 95 aa8.69□□□□□ -1.02
PKD1-236ENST00000568796 RHEBQ15382 184 aa8.69□□□□□ -1.02
PKD1-236ENST00000568796 FABP9Q0Z7S8 132 aa8.68□□□□□ -1.02
PKD1-236ENST00000568796 TMEM170BQ5T4T1 132 aa8.68□□□□□ -1.02
PKD1-236ENST00000568796 SEC61BP60468 96 aaKnown RBP8.67□□□□□ -1.02
PKD1-236ENST00000568796 SFTA2Q6UW10 78 aa8.67□□□□□ -1.02
PKD1-236ENST00000568796 RPS10P5Q9NQ39 176 aa8.67□□□□□ -1.02
PKD1-236ENST00000568796 SPINK1P00995 79 aa8.66□□□□□ -1.02
PKD1-236ENST00000568796 S100A1P23297 94 aa8.66□□□□□ -1.02
PKD1-236ENST00000568796 SMCR5Q8TEV8 140 aa8.66□□□□□ -1.02
PKD1-236ENST00000568796 C11orf86A6NJI1 115 aa8.65□□□□□ -1.02
PKD1-236ENST00000568796 PRYO14603 147 aa8.65□□□□□ -1.02
PKD1-236ENST00000568796 ATP6V1G1O75348 118 aa8.65□□□□□ -1.02
PKD1-236ENST00000568796 BAGE3Q86Y29 109 aa8.65□□□□□ -1.02
PKD1-236ENST00000568796 KRTAP4-1Q9BYQ7 146 aa8.65□□□□□ -1.02
PKD1-236ENST00000568796 NDUFA12Q9UI09 145 aa8.65□□□□□ -1.02
PKD1-236ENST00000568796 ETDCA0A1B0GVM5 59 aa8.64□□□□□ -1.03
PKD1-236ENST00000568796 NCR3O14931 201 aa8.64□□□□□ -1.03
PKD1-236ENST00000568796 COX19Q49B96 90 aa8.64□□□□□ -1.03
PKD1-236ENST00000568796 A0A096LNJ9 63 aa8.63□□□□□ -1.03
PKD1-236ENST00000568796 HBDP02042 147 aa8.63□□□□□ -1.03
PKD1-236ENST00000568796 PMCHL1Q16048 86 aa8.63□□□□□ -1.03
PKD1-236ENST00000568796 LCE2DQ5TA82 110 aaPredicted RBP8.63□□□□□ -1.03
PKD1-236ENST00000568796 BOD1L2Q8IYS8 172 aa8.63□□□□□ -1.03
PKD1-236ENST00000568796 GAGE2AQ6NT46 116 aa8.62□□□□□ -1.03
PKD1-236ENST00000568796 IGLV9-49A0A0B4J1Y8 123 aa8.61□□□□□ -1.03
PKD1-236ENST00000568796 LINC00614P0C842 121 aa8.61□□□□□ -1.03
PKD1-236ENST00000568796 MEIG1Q5JSS6 88 aa8.61□□□□□ -1.03
PKD1-236ENST00000568796 SMIM13P0DJ93 91 aa8.6□□□□□ -1.03
PKD1-236ENST00000568796 MOBPQ13875 183 aa8.6□□□□□ -1.03
PKD1-236ENST00000568796 KCNQ1DNQ9H478 68 aa8.6□□□□□ -1.03
PKD1-236ENST00000568796 CHTOPQ9Y3Y2 248 aaKnown RBP8.6□□□□□ -1.03
PKD1-236ENST00000568796 FAM19A2Q8N3H0 131 aa8.59□□□□□ -1.03
PKD1-236ENST00000568796 URB1-AS1Q96HZ7 61 aa8.59□□□□□ -1.03
PKD1-236ENST00000568796 FSIP2Q5CZC0 6907 aa8.59□□□□□ -1.03
PKD1-236ENST00000568796 SPRR1AP35321 89 aa8.58□□□□□ -1.04
PKD1-236ENST00000568796 LINC00483Q53H64 154 aa8.58□□□□□ -1.04
PKD1-236ENST00000568796 MIR7-3HGQ8N6C7 128 aa8.58□□□□□ -1.04
PKD1-236ENST00000568796 C18orf32Q8TCD1 76 aa8.58□□□□□ -1.04
PKD1-236ENST00000568796 CRCT1Q9UGL9 99 aa8.58□□□□□ -1.04
PKD1-236ENST00000568796 TRBV10-3A0A0K0K1G6 114 aa8.57□□□□□ -1.04
PKD1-236ENST00000568796 S100A12P80511 92 aa8.57□□□□□ -1.04
PKD1-236ENST00000568796 Q8N377 158 aa8.57□□□□□ -1.04
PKD1-236ENST00000568796 TMEM223A0PJW6 202 aa8.56□□□□□ -1.04
PKD1-236ENST00000568796 KRTAP4-16G5E9R7 235 aaPredicted RBP8.56□□□□□ -1.04
PKD1-236ENST00000568796 SLC25A20O43772 301 aa8.56□□□□□ -1.04
PKD1-236ENST00000568796 TRAPPC1Q9Y5R8 145 aa8.56□□□□□ -1.04
PKD1-236ENST00000568796 SSBP3-AS1Q7Z2R9 100 aa8.55□□□□□ -1.04
PKD1-236ENST00000568796 YPEL4Q96NS1 127 aa8.55□□□□□ -1.04
PKD1-236ENST00000568796 ERC2-IT1O76042 136 aa8.54□□□□□ -1.04
PKD1-236ENST00000568796 RPS29P62273 56 aaKnown RBP8.54□□□□□ -1.04
PKD1-236ENST00000568796 B5MCH6 92 aa8.53□□□□□ -1.04
PKD1-236ENST00000568796 LINC00587B1AMM8 73 aa8.52□□□□□ -1.05
PKD1-236ENST00000568796 HERV-K104P63124 156 aa8.52□□□□□ -1.05
PKD1-236ENST00000568796 XP32Q5T750 250 aa8.52□□□□□ -1.05
PKD1-236ENST00000568796 C9orf153Q5TBE3 101 aa8.52□□□□□ -1.05
PKD1-236ENST00000568796 MAP1LC3CQ9BXW4 147 aa8.51□□□□□ -1.05
PKD1-236ENST00000568796 COLCA2A8K830 154 aa8.5□□□□□ -1.05
PKD1-236ENST00000568796 DDTP30046 118 aa8.5□□□□□ -1.05
PKD1-236ENST00000568796 IFI27L1Q96BM0 104 aa8.5□□□□□ -1.05
PKD1-236ENST00000568796 TRAV12-1A0A0B4J245 112 aa8.49□□□□□ -1.05
PKD1-236ENST00000568796 MYMXA0A1B0GTQ4 84 aa8.49□□□□□ -1.05
PKD1-236ENST00000568796 Q9BRP9 147 aa8.49□□□□□ -1.05
PKD1-236ENST00000568796 LCE2CQ5TA81 110 aa8.47□□□□□ -1.05
PKD1-236ENST00000568796 Q6ZRX8 168 aa8.47□□□□□ -1.05
PKD1-236ENST00000568796 S100A7L2Q5SY68 101 aa8.45□□□□□ -1.06
PKD1-236ENST00000568796 TRBV10-2A0A0K0K1G8 114 aa8.44□□□□□ -1.06
PKD1-236ENST00000568796 H0Y8G0 127 aa8.44□□□□□ -1.06
PKD1-236ENST00000568796 MIEN1Q9BRT3 115 aa8.44□□□□□ -1.06
PKD1-236ENST00000568796 IGLV8-61A0A075B6I0 122 aa8.43□□□□□ -1.06
PKD1-236ENST00000568796 JOSD1Q15040 202 aaPredicted RBP8.43□□□□□ -1.06
PKD1-236ENST00000568796 PCOTHQ58A44 107 aa8.43□□□□□ -1.06
PKD1-236ENST00000568796 CHCHD1Q96BP2 118 aaKnown RBP8.43□□□□□ -1.06
PKD1-236ENST00000568796 SPANXB1Q9NS25 103 aaPredicted RBP8.43□□□□□ -1.06
PKD1-236ENST00000568796 MT1HP80294 61 aa8.42□□□□□ -1.06
PKD1-236ENST00000568796 TRAV23DV6A0A075B6W5 121 aa8.41□□□□□ -1.06
PKD1-236ENST00000568796 C9orf92A6NGG3 77 aa8.41□□□□□ -1.06
PKD1-236ENST00000568796 TRGC2P03986 189 aa8.41□□□□□ -1.06
PKD1-236ENST00000568796 TSPEAR-AS2P59090 65 aa8.41□□□□□ -1.06
PKD1-236ENST00000568796 HRCT1Q6UXD1 115 aa8.41□□□□□ -1.06
PKD1-236ENST00000568796 ST20-AS1Q8NBB2 130 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms