RNA–Protein interactions for RNA: ENST00000568454.5

TSC2-222, Transcript of TSC complex subunit 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TSC2, Length 5,434 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-222ENST00000568454 ERC2-IT1O76042 136 aa11.44□□□□□ -0.58
TSC2-222ENST00000568454 TRAV22A0A0B4J277 110 aa11.44□□□□□ -0.58
TSC2-222ENST00000568454 SRCAPQ6ZRS2 3230 aa11.44□□□□□ -0.58
TSC2-222ENST00000568454 LITAFQ99732 161 aa11.43□□□□□ -0.58
TSC2-222ENST00000568454 KRTAP10-9P60411 292 aa11.43□□□□□ -0.58
TSC2-222ENST00000568454 C8orf87E5RJ46 101 aa11.42□□□□□ -0.58
TSC2-222ENST00000568454 TET2Q6N021 2002 aaPredicted RBP11.42□□□□□ -0.58
TSC2-222ENST00000568454 PIEZO2Q9H5I5 2752 aa11.41□□□□□ -0.58
TSC2-222ENST00000568454 Q6ZRX8 168 aa11.41□□□□□ -0.58
TSC2-222ENST00000568454 LINC00476Q8WZB0 136 aa11.4□□□□□ -0.58
TSC2-222ENST00000568454 ATP11AUNQ6ZP68 121 aa11.39□□□□□ -0.59
TSC2-222ENST00000568454 SMR3AQ99954 134 aa11.38□□□□□ -0.59
TSC2-222ENST00000568454 IGF2RP11717 2491 aa11.37□□□□□ -0.59
TSC2-222ENST00000568454 CYP4F30PQ9H0H9 118 aa11.36□□□□□ -0.59
TSC2-222ENST00000568454 FSHBP01225 129 aa11.36□□□□□ -0.59
TSC2-222ENST00000568454 PIEZO1Q92508 2521 aa11.35□□□□□ -0.59
TSC2-222ENST00000568454 NCOR2Q9Y618 2525 aa11.35□□□□□ -0.59
TSC2-222ENST00000568454 C1orf134Q5TEV5 83 aa11.35□□□□□ -0.59
TSC2-222ENST00000568454 MOBPQ13875 183 aa11.34□□□□□ -0.59
TSC2-222ENST00000568454 H3BNG1 76 aa11.34□□□□□ -0.59
TSC2-222ENST00000568454 TLN1Q9Y490 2541 aaKnown RBP11.34□□□□□ -0.59
TSC2-222ENST00000568454 VPREB1P12018 145 aa11.33□□□□□ -0.6
TSC2-222ENST00000568454 TRBV7-4A0A0J9YYF1 115 aa11.33□□□□□ -0.6
TSC2-222ENST00000568454 FHL3Q13643 280 aa11.32□□□□□ -0.6
TSC2-222ENST00000568454 GVQW2A0A096LPI5 108 aaPredicted RBP11.31□□□□□ -0.6
TSC2-222ENST00000568454 NHLRC4P0CG21 123 aaPredicted RBP11.31□□□□□ -0.6
TSC2-222ENST00000568454 A8MUN3 132 aa11.3□□□□□ -0.6
TSC2-222ENST00000568454 KLKP1Q107X0 134 aa11.3□□□□□ -0.6
TSC2-222ENST00000568454 LOC101927531A0A1B0GV80 90 aa11.3□□□□□ -0.6
TSC2-222ENST00000568454 IGLV6-57P01721 117 aa11.29□□□□□ -0.6
TSC2-222ENST00000568454 ST20-AS1Q8NBB2 130 aa11.27□□□□□ -0.6
TSC2-222ENST00000568454 MUC4Q99102 2169 aa11.27□□□□□ -0.61
TSC2-222ENST00000568454 KLK9Q2XQG4 91 aa11.27□□□□□ -0.61
TSC2-222ENST00000568454 COA5Q86WW8 74 aa11.26□□□□□ -0.61
TSC2-222ENST00000568454 FN1P02751 2386 aaKnown RBP11.26□□□□□ -0.61
TSC2-222ENST00000568454 A8MWP4 228 aa11.25□□□□□ -0.61
TSC2-222ENST00000568454 RPL37AP61513 92 aaKnown RBP11.25□□□□□ -0.61
TSC2-222ENST00000568454 SPACA4Q8TDM5 124 aa11.25□□□□□ -0.61
TSC2-222ENST00000568454 WDR87Q6ZQQ6 2873 aa11.24□□□□□ -0.61
TSC2-222ENST00000568454 EPM2AB3EWF7 344 aa11.24□□□□□ -0.61
TSC2-222ENST00000568454 LINC00313P59037 77 aa11.23□□□□□ -0.61
TSC2-222ENST00000568454 K7EQZ3 153 aa11.23□□□□□ -0.61
TSC2-222ENST00000568454 C16orf90A8MZG2 172 aa11.21□□□□□ -0.62
TSC2-222ENST00000568454 PHF5AQ7RTV0 110 aaKnown RBP11.21□□□□□ -0.62
TSC2-222ENST00000568454 ABCA12Q86UK0 2595 aa11.2□□□□□ -0.62
TSC2-222ENST00000568454 USP9XQ93008 2570 aaPredicted RBP11.19□□□□□ -0.62
TSC2-222ENST00000568454 LINC00336Q6ZUF6 198 aa11.19□□□□□ -0.62
TSC2-222ENST00000568454 CD164Q04900 197 aa11.19□□□□□ -0.62
TSC2-222ENST00000568454 SPINT4Q6UDR6 99 aa11.18□□□□□ -0.62
TSC2-222ENST00000568454 PTPRBP23467 1997 aa11.18□□□□□ -0.62
TSC2-222ENST00000568454 FAM229AH3BQW9 127 aa11.18□□□□□ -0.62
TSC2-222ENST00000568454 ZNF462Q96JM2 2506 aa11.18□□□□□ -0.62
TSC2-222ENST00000568454 UQCR11O14957 56 aa11.18□□□□□ -0.62
TSC2-222ENST00000568454 IGLV8-61A0A075B6I0 122 aa11.17□□□□□ -0.62
TSC2-222ENST00000568454 LINC01600Q96MT4 127 aa11.17□□□□□ -0.62
TSC2-222ENST00000568454 H7BZZ5 65 aa11.17□□□□□ -0.62
TSC2-222ENST00000568454 MRPL34Q9BQ48 92 aaKnown RBP11.17□□□□□ -0.62
TSC2-222ENST00000568454 Q6ZRP5 223 aa11.17□□□□□ -0.62
TSC2-222ENST00000568454 LINC00528Q8N1L1 170 aa11.15□□□□□ -0.62
TSC2-222ENST00000568454 COL4A2P08572 1712 aa11.15□□□□□ -0.62
TSC2-222ENST00000568454 MDFIQ99750 246 aa11.14□□□□□ -0.63
TSC2-222ENST00000568454 JMJD1CQ15652 2540 aa11.14□□□□□ -0.63
TSC2-222ENST00000568454 KCNQ1DNQ9H478 68 aa11.14□□□□□ -0.63
TSC2-222ENST00000568454 EIF4EBP3O60516 100 aaPredicted RBP11.14□□□□□ -0.63
TSC2-222ENST00000568454 TLN2Q9Y4G6 2542 aa11.13□□□□□ -0.63
TSC2-222ENST00000568454 Q8NAQ8 132 aa11.12□□□□□ -0.63
TSC2-222ENST00000568454 PKD1L2Q7Z442 2459 aa11.1□□□□□ -0.63
TSC2-222ENST00000568454 IGLV1-50A0A075B6I6 118 aa11.1□□□□□ -0.63
TSC2-222ENST00000568454 PRR15Q8IV56 129 aa11.09□□□□□ -0.63
TSC2-222ENST00000568454 KTN1-AS1Q86SY8 53 aa11.09□□□□□ -0.63
TSC2-222ENST00000568454 SSBP3-AS1Q7Z2R9 100 aa11.07□□□□□ -0.64
TSC2-222ENST00000568454 SETD2Q9BYW2 2564 aaPredicted RBP11.06□□□□□ -0.64
TSC2-222ENST00000568454 MIR22HGQ0VDD5 57 aa11.06□□□□□ -0.64
TSC2-222ENST00000568454 IGFL1Q6UW32 110 aa11.06□□□□□ -0.64
TSC2-222ENST00000568454 LINC00588Q9Y4M8 146 aa11.06□□□□□ -0.64
TSC2-222ENST00000568454 COL27A1Q8IZC6 1860 aaPredicted RBP11.06□□□□□ -0.64
TSC2-222ENST00000568454 LRRK2Q5S007 2527 aa11.05□□□□□ -0.64
TSC2-222ENST00000568454 DNAH10OSP0CZ25 163 aa11.05□□□□□ -0.64
TSC2-222ENST00000568454 RTL8CO15255 209 aa11.04□□□□□ -0.64
TSC2-222ENST00000568454 C8orf17Q9NRJ1 99 aa11.04□□□□□ -0.64
TSC2-222ENST00000568454 LCA10Q71F78 164 aa11.04□□□□□ -0.64
TSC2-222ENST00000568454 CHTF8P0CG12 524 aa11.04□□□□□ -0.64
TSC2-222ENST00000568454 FAM168BA1KXE4 195 aa11.03□□□□□ -0.64
TSC2-222ENST00000568454 TYMSOSQ8TAI1 123 aa11.03□□□□□ -0.64
TSC2-222ENST00000568454 CEP295Q9C0D2 2601 aa11.03□□□□□ -0.64
TSC2-222ENST00000568454 Q96NJ1 140 aa11.03□□□□□ -0.64
TSC2-222ENST00000568454 ZFYVE26Q68DK2 2539 aa11.03□□□□□ -0.64
TSC2-222ENST00000568454 USP9YO00507 2555 aaPredicted RBP11.03□□□□□ -0.64
TSC2-222ENST00000568454 NBDYA0A0U1RRE5 68 aa11.02□□□□□ -0.64
TSC2-222ENST00000568454 ANKRD11Q6UB99 2663 aaPredicted RBP11.01□□□□□ -0.65
TSC2-222ENST00000568454 Q8N377 158 aa11.01□□□□□ -0.65
TSC2-222ENST00000568454 PRR34Q9NV39 138 aa10.98□□□□□ -0.65
TSC2-222ENST00000568454 CENPFP49454 3210 aa10.98□□□□□ -0.65
TSC2-222ENST00000568454 SPANXA2-OT1Q8N9U9 137 aa10.98□□□□□ -0.65
TSC2-222ENST00000568454 A0A1B0GVX0 72 aa10.97□□□□□ -0.65
TSC2-222ENST00000568454 CSNK1G2-AS1Q8NCQ2 148 aa10.97□□□□□ -0.65
TSC2-222ENST00000568454 CRIPTQ9P021 101 aa10.95□□□□□ -0.66
TSC2-222ENST00000568454 C9orf129Q5T035 196 aaKnown RBP10.93□□□□□ -0.66
TSC2-222ENST00000568454 PLA2G2DQ9UNK4 145 aa10.93□□□□□ -0.66
TSC2-222ENST00000568454 WIPF1O43516 503 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 84 ms