RNA–Protein interactions for RNA: ENST00000566612.5

CDH1-210, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 4,138 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-210ENST00000566612 ATOX1O00244 68 aa8.02□□□□□ -1.13
CDH1-210ENST00000566612 KRTAP1-1Q07627 177 aa8.01□□□□□ -1.13
CDH1-210ENST00000566612 LYPD5Q6UWN5 251 aa8.01□□□□□ -1.13
CDH1-210ENST00000566612 SCXQ7RTU7 201 aa8.01□□□□□ -1.13
CDH1-210ENST00000566612 STAB1Q9NY15 2570 aa8□□□□□ -1.13
CDH1-210ENST00000566612 TRBV10-3A0A0K0K1G6 114 aa8□□□□□ -1.13
CDH1-210ENST00000566612 ENHOQ6UWT2 76 aa8□□□□□ -1.13
CDH1-210ENST00000566612 FAM240AA0A1B0GVK7 77 aa8□□□□□ -1.13
CDH1-210ENST00000566612 Q8N814 137 aa8□□□□□ -1.13
CDH1-210ENST00000566612 WFDC9Q8NEX5 89 aa8□□□□□ -1.13
CDH1-210ENST00000566612 IL17DQ8TAD2 202 aa7.99□□□□□ -1.13
CDH1-210ENST00000566612 C10orf25Q5T742 122 aa7.99□□□□□ -1.13
CDH1-210ENST00000566612 NREPQ16612 68 aa7.99□□□□□ -1.13
CDH1-210ENST00000566612 FAM104AQ969W3 186 aa7.99□□□□□ -1.13
CDH1-210ENST00000566612 NBEAL1Q6ZS30 2694 aa7.99□□□□□ -1.13
CDH1-210ENST00000566612 M0QXV9 152 aa7.98□□□□□ -1.13
CDH1-210ENST00000566612 ZNF73O43830 326 aaPredicted RBP7.98□□□□□ -1.13
CDH1-210ENST00000566612 A0A087WVE0 104 aa7.97□□□□□ -1.13
CDH1-210ENST00000566612 RPL37AP8A6NKH3 93 aa7.97□□□□□ -1.13
CDH1-210ENST00000566612 SPATA3Q8NHX4 192 aa7.97□□□□□ -1.13
CDH1-210ENST00000566612 FAM19A5Q7Z5A7 132 aaPredicted RBP7.97□□□□□ -1.13
CDH1-210ENST00000566612 UPK3BQ9BT76 320 aa7.97□□□□□ -1.13
CDH1-210ENST00000566612 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.96□□□□□ -1.13
CDH1-210ENST00000566612 CITED1Q99966 193 aa7.96□□□□□ -1.13
CDH1-210ENST00000566612 BSNQ9UPA5 3926 aa7.96□□□□□ -1.13
CDH1-210ENST00000566612 FUSP35637 526 aaKnown RBP eCLIP7.96□□□□□ -1.14
CDH1-210ENST00000566612 TRAV10A0A0B4J240 114 aa7.96□□□□□ -1.14
CDH1-210ENST00000566612 Q8NAQ8 132 aa7.96□□□□□ -1.14
CDH1-210ENST00000566612 KLK5Q9Y337 293 aaPredicted RBP7.95□□□□□ -1.14
CDH1-210ENST00000566612 M0R378 163 aa7.95□□□□□ -1.14
CDH1-210ENST00000566612 LINC00846Q9NV44 126 aa7.94□□□□□ -1.14
CDH1-210ENST00000566612 IMUPQ9GZP8 106 aa7.94□□□□□ -1.14
CDH1-210ENST00000566612 HIGD2AQ9BW72 106 aa7.93□□□□□ -1.14
CDH1-210ENST00000566612 NDUFC2O95298 119 aa7.93□□□□□ -1.14
CDH1-210ENST00000566612 Q6Q795 121 aa7.93□□□□□ -1.14
CDH1-210ENST00000566612 Q6ZRU5 148 aa7.93□□□□□ -1.14
CDH1-210ENST00000566612 CCKP06307 115 aa7.93□□□□□ -1.14
CDH1-210ENST00000566612 USP17L23D6RBM5 183 aa7.93□□□□□ -1.14
CDH1-210ENST00000566612 PDE6GP18545 87 aa7.93□□□□□ -1.14
CDH1-210ENST00000566612 EGFEM1PQ0D2K5 195 aa7.93□□□□□ -1.14
CDH1-210ENST00000566612 C3orf84H3BNL1 204 aa7.92□□□□□ -1.14
CDH1-210ENST00000566612 UQCRQO14949 82 aa7.92□□□□□ -1.14
CDH1-210ENST00000566612 ESRGQ1W209 222 aa7.92□□□□□ -1.14
CDH1-210ENST00000566612 C20orf197Q8N268 126 aa7.92□□□□□ -1.14
CDH1-210ENST00000566612 H3BQ85 93 aa7.91□□□□□ -1.14
CDH1-210ENST00000566612 C3orf22Q8N5N4 141 aa7.91□□□□□ -1.14
CDH1-210ENST00000566612 FAM19A3Q7Z5A8 133 aa7.9□□□□□ -1.14
CDH1-210ENST00000566612 LINC01561Q8N1V8 128 aa7.9□□□□□ -1.14
CDH1-210ENST00000566612 A0A096LNI7 61 aa7.9□□□□□ -1.14
CDH1-210ENST00000566612 LINC00575Q6W349 94 aa7.9□□□□□ -1.15
CDH1-210ENST00000566612 C6orf48Q9UBA6 75 aa7.9□□□□□ -1.15
CDH1-210ENST00000566612 KRTAP24-1Q3LI83 254 aa7.89□□□□□ -1.15
CDH1-210ENST00000566612 NDUFC2-KCTD14E9PQ53 114 aa7.89□□□□□ -1.15
CDH1-210ENST00000566612 CSMD2Q7Z408 3487 aa7.88□□□□□ -1.15
CDH1-210ENST00000566612 BPY2O14599 106 aa7.88□□□□□ -1.15
CDH1-210ENST00000566612 MUC7Q8TAX7 377 aa7.88□□□□□ -1.15
CDH1-210ENST00000566612 Q6JHZ5 121 aa7.87□□□□□ -1.15
CDH1-210ENST00000566612 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.87□□□□□ -1.15
CDH1-210ENST00000566612 FAM19A1Q7Z5A9 133 aa7.87□□□□□ -1.15
CDH1-210ENST00000566612 NIPBLQ6KC79 2804 aaeCLIP7.86□□□□□ -1.15
CDH1-210ENST00000566612 UBE2AP49459 152 aa7.86□□□□□ -1.15
CDH1-210ENST00000566612 COX7CP15954 63 aa7.85□□□□□ -1.15
CDH1-210ENST00000566612 ATP5EP2Q5VTU8 51 aa7.85□□□□□ -1.15
CDH1-210ENST00000566612 HIVEP1P15822 2718 aa7.85□□□□□ -1.15
CDH1-210ENST00000566612 KIAA0087Q14695 138 aa7.85□□□□□ -1.15
CDH1-210ENST00000566612 SERP2Q8N6R1 65 aa7.85□□□□□ -1.15
CDH1-210ENST00000566612 LINC00612Q8N6U2 182 aa7.85□□□□□ -1.15
CDH1-210ENST00000566612 NSD1Q96L73 2696 aaPredicted RBP7.84□□□□□ -1.15
CDH1-210ENST00000566612 M0R2N4 97 aa7.84□□□□□ -1.15
CDH1-210ENST00000566612 TRBV7-7A0A0K0K1E9 115 aa7.84□□□□□ -1.16
CDH1-210ENST00000566612 PPDPFQ9H3Y8 114 aa7.83□□□□□ -1.16
CDH1-210ENST00000566612 SMCR5Q8TEV8 140 aa7.83□□□□□ -1.16
CDH1-210ENST00000566612 KRTAP10-11P60412 298 aa7.82□□□□□ -1.16
CDH1-210ENST00000566612 C2orf48Q96LS8 159 aa7.82□□□□□ -1.16
CDH1-210ENST00000566612 C9orf129Q5T035 196 aaKnown RBP7.81□□□□□ -1.16
CDH1-210ENST00000566612 SNURFQ9Y675 71 aa7.81□□□□□ -1.16
CDH1-210ENST00000566612 CDK2AP2O75956 126 aa7.8□□□□□ -1.16
CDH1-210ENST00000566612 LOC107984640A0A0U1RRK4 108 aa7.8□□□□□ -1.16
CDH1-210ENST00000566612 LINC01556Q5JQF7 62 aa7.8□□□□□ -1.16
CDH1-210ENST00000566612 DHRS4-AS1Q9P1J3 65 aa7.8□□□□□ -1.16
CDH1-210ENST00000566612 J3KT08 172 aa7.79□□□□□ -1.16
CDH1-210ENST00000566612 VPS13CQ709C8 3753 aa7.78□□□□□ -1.16
CDH1-210ENST00000566612 Q6ZVQ6 151 aa7.78□□□□□ -1.16
CDH1-210ENST00000566612 C7orf33Q8WU49 177 aa7.77□□□□□ -1.17
CDH1-210ENST00000566612 C14orf177Q52M58 125 aa7.77□□□□□ -1.17
CDH1-210ENST00000566612 PRR34Q9NV39 138 aa7.77□□□□□ -1.17
CDH1-210ENST00000566612 ZFHX3Q15911 3703 aa7.77□□□□□ -1.17
CDH1-210ENST00000566612 Q8N9L7 120 aa7.76□□□□□ -1.17
CDH1-210ENST00000566612 Q6ZRP5 223 aa7.76□□□□□ -1.17
CDH1-210ENST00000566612 H3BNG1 76 aa7.76□□□□□ -1.17
CDH1-210ENST00000566612 LINC01547P58512 204 aaPredicted RBP7.75□□□□□ -1.17
CDH1-210ENST00000566612 NHLRC4P0CG21 123 aaPredicted RBP7.75□□□□□ -1.17
CDH1-210ENST00000566612 C1orf137Q5JT78 98 aa7.75□□□□□ -1.17
CDH1-210ENST00000566612 LINC00588Q9Y4M8 146 aa7.75□□□□□ -1.17
CDH1-210ENST00000566612 C22orf24Q9Y442 160 aa7.74□□□□□ -1.17
CDH1-210ENST00000566612 MRPL55Q7Z7F7 128 aaKnown RBP7.74□□□□□ -1.17
CDH1-210ENST00000566612 IGLV6-57P01721 117 aa7.73□□□□□ -1.17
CDH1-210ENST00000566612 H0Y9J4 135 aa7.73□□□□□ -1.17
CDH1-210ENST00000566612 VPREB1P12018 145 aa7.73□□□□□ -1.17
CDH1-210ENST00000566612 B9D2Q9BPU9 175 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms