RNA–Protein interactions for RNA: ENST00000566600.1

NME3-209, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 913 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-209ENST00000566600 C22orf24Q9Y442 160 aa16.22■□□□□ 0.19
NME3-209ENST00000566600 UBE2BP63146 152 aa16.21■□□□□ 0.19
NME3-209ENST00000566600 SMIM13P0DJ93 91 aa16.2■□□□□ 0.18
NME3-209ENST00000566600 SNRPEP62304 92 aaKnown RBP16.2■□□□□ 0.18
NME3-209ENST00000566600 A0A0U1RRA0 63 aa16.19■□□□□ 0.18
NME3-209ENST00000566600 PSORS1C2Q9UIG4 136 aa16.19■□□□□ 0.18
NME3-209ENST00000566600 IGLV5-37A0A075B6J1 123 aa16.18■□□□□ 0.18
NME3-209ENST00000566600 MRPL55Q7Z7F7 128 aaKnown RBP16.18■□□□□ 0.18
NME3-209ENST00000566600 NKAPP1Q8N9T2 125 aa16.18■□□□□ 0.18
NME3-209ENST00000566600 RPL24P83731 157 aaKnown RBP16.17■□□□□ 0.18
NME3-209ENST00000566600 HNRNPA3P51991 378 aaKnown RBP16.16■□□□□ 0.18
NME3-209ENST00000566600 C5orf52A6NGY3 159 aa16.15■□□□□ 0.18
NME3-209ENST00000566600 FLG2Q5D862 2391 aaPredicted RBP16.14■□□□□ 0.17
NME3-209ENST00000566600 C1orf137Q5JT78 98 aa16.14■□□□□ 0.17
NME3-209ENST00000566600 MIR7-3HGQ8N6C7 128 aa16.14■□□□□ 0.17
NME3-209ENST00000566600 VPREB1P12018 145 aa16.11■□□□□ 0.17
NME3-209ENST00000566600 KRTAP11-1Q8IUC1 163 aa16.11■□□□□ 0.17
NME3-209ENST00000566600 ATOH7Q8N100 152 aa16.1■□□□□ 0.17
NME3-209ENST00000566600 LINC00167Q96N53 147 aa16.1■□□□□ 0.17
NME3-209ENST00000566600 A0A0J9YXY3 114 aa16.09■□□□□ 0.17
NME3-209ENST00000566600 IGKV2D-26A0A0A0MRZ7 120 aa16.08■□□□□ 0.16
NME3-209ENST00000566600 SPINK6Q6UWN8 80 aa16.08■□□□□ 0.16
NME3-209ENST00000566600 GAGE10A6NGK3 116 aa16.06■□□□□ 0.16
NME3-209ENST00000566600 ZNF815PA8K554 130 aa16.06■□□□□ 0.16
NME3-209ENST00000566600 SRSF9Q13242 221 aaKnown RBP eCLIP16.06■□□□□ 0.16
NME3-209ENST00000566600 IGLV7-43P04211 117 aa16.05■□□□□ 0.16
NME3-209ENST00000566600 BOD1L2Q8IYS8 172 aa16.05■□□□□ 0.16
NME3-209ENST00000566600 RPL37AP8A6NKH3 93 aa16.04■□□□□ 0.16
NME3-209ENST00000566600 ANKRD39Q53RE8 183 aa16.04■□□□□ 0.16
NME3-209ENST00000566600 DAND5Q8N907 189 aa16.04■□□□□ 0.16
NME3-209ENST00000566600 PKHD1L1Q86WI1 4243 aa16.03■□□□□ 0.16
NME3-209ENST00000566600 LOC107984156A0A0G2JMH3 177 aa16.03■□□□□ 0.16
NME3-209ENST00000566600 OXTP01178 125 aa16.03■□□□□ 0.16
NME3-209ENST00000566600 ARL17AQ8IVW1 177 aa16.03■□□□□ 0.16
NME3-209ENST00000566600 MIEN1Q9BRT3 115 aa16.03■□□□□ 0.16
NME3-209ENST00000566600 Q8NDZ9 215 aa16.02■□□□□ 0.16
NME3-209ENST00000566600 MYCBP2O75592 4640 aa16.01■□□□□ 0.15
NME3-209ENST00000566600 KRTAP29-1A8MX34 341 aaPredicted RBP16.01■□□□□ 0.15
NME3-209ENST00000566600 HSBP1L1C9JCN9 74 aa16.01■□□□□ 0.15
NME3-209ENST00000566600 TIMM17BO60830 172 aa16.01■□□□□ 0.15
NME3-209ENST00000566600 M0R378 163 aa16■□□□□ 0.15
NME3-209ENST00000566600 SCGB1D1O95968 90 aa16■□□□□ 0.15
NME3-209ENST00000566600 TTTY13Q9BZ97 58 aa15.99■□□□□ 0.15
NME3-209ENST00000566600 IGLV1-50A0A075B6I6 118 aa15.98■□□□□ 0.15
NME3-209ENST00000566600 ADAMTSL4-AS1Q5T5F5 129 aa15.98■□□□□ 0.15
NME3-209ENST00000566600 IGKV2-28A0A075B6P5 120 aa15.97■□□□□ 0.15
NME3-209ENST00000566600 IGKV2D-28P01615 120 aa15.97■□□□□ 0.15
NME3-209ENST00000566600 REG3GQ6UW15 175 aa15.97■□□□□ 0.15
NME3-209ENST00000566600 BCE1O60756 84 aa15.96■□□□□ 0.15
NME3-209ENST00000566600 SCGB1D4Q6XE38 83 aa15.96■□□□□ 0.15
NME3-209ENST00000566600 DIRC1Q969H9 104 aa15.96■□□□□ 0.15
NME3-209ENST00000566600 J3QL48 77 aa15.95■□□□□ 0.14
NME3-209ENST00000566600 LITAFQ99732 161 aa15.95■□□□□ 0.14
NME3-209ENST00000566600 NCR3O14931 201 aa15.93■□□□□ 0.14
NME3-209ENST00000566600 NDUFC2O95298 119 aa15.93■□□□□ 0.14
NME3-209ENST00000566600 DMBT1Q9UGM3 2413 aaPredicted RBP15.93■□□□□ 0.14
NME3-209ENST00000566600 ZNF861PO60384 105 aa15.92■□□□□ 0.14
NME3-209ENST00000566600 PCP2Q8IVA1 136 aa15.92■□□□□ 0.14
NME3-209ENST00000566600 TRBV10-2A0A0K0K1G8 114 aa15.91■□□□□ 0.14
NME3-209ENST00000566600 TMEM238C9JI98 176 aa15.91■□□□□ 0.14
NME3-209ENST00000566600 RPL28P46779 137 aaKnown RBP15.91■□□□□ 0.14
NME3-209ENST00000566600 NPC2P61916 151 aa15.9■□□□□ 0.14
NME3-209ENST00000566600 SPANXB1Q9NS25 103 aaPredicted RBP15.9■□□□□ 0.14
NME3-209ENST00000566600 H0Y9J4 135 aa15.89■□□□□ 0.13
NME3-209ENST00000566600 SOSTDC1Q6X4U4 206 aa15.89■□□□□ 0.13
NME3-209ENST00000566600 LINC00308Q8TCZ7 52 aa15.89■□□□□ 0.13
NME3-209ENST00000566600 TMEM126AQ9H061 195 aa15.89■□□□□ 0.13
NME3-209ENST00000566600 S100A12P80511 92 aa15.87■□□□□ 0.13
NME3-209ENST00000566600 TMA7Q9Y2S6 64 aaKnown RBP15.87■□□□□ 0.13
NME3-209ENST00000566600 UBE2AP49459 152 aa15.86■□□□□ 0.13
NME3-209ENST00000566600 COPS9Q8WXC6 57 aa15.86■□□□□ 0.13
NME3-209ENST00000566600 SPANXDQ9BXN6 97 aa15.86■□□□□ 0.13
NME3-209ENST00000566600 SPANXCQ9NY87 97 aa15.86■□□□□ 0.13
NME3-209ENST00000566600 PRYO14603 147 aa15.85■□□□□ 0.13
NME3-209ENST00000566600 Q6ZVH6 145 aa15.85■□□□□ 0.13
NME3-209ENST00000566600 LINC01600Q96MT4 127 aa15.85■□□□□ 0.13
NME3-209ENST00000566600 EIF4EBP3O60516 100 aaPredicted RBP15.84■□□□□ 0.13
NME3-209ENST00000566600 LRP1Q07954 4544 aaKnown RBP15.84■□□□□ 0.13
NME3-209ENST00000566600 TRBV10-3A0A0K0K1G6 114 aa15.83■□□□□ 0.12
NME3-209ENST00000566600 KCNQ1DNQ9H478 68 aa15.83■□□□□ 0.12
NME3-209ENST00000566600 DDTP30046 118 aa15.82■□□□□ 0.12
NME3-209ENST00000566600 JOSD1Q15040 202 aaPredicted RBP15.82■□□□□ 0.12
NME3-209ENST00000566600 FAM19A1Q7Z5A9 133 aa15.82■□□□□ 0.12
NME3-209ENST00000566600 FAT3Q8TDW7 4589 aa15.81■□□□□ 0.12
NME3-209ENST00000566600 IFITM1P13164 125 aa15.81■□□□□ 0.12
NME3-209ENST00000566600 S100A7L2Q5SY68 101 aa15.81■□□□□ 0.12
NME3-209ENST00000566600 KRTAP13-1Q8IUC0 172 aa15.81■□□□□ 0.12
NME3-209ENST00000566600 PPDPFQ9H3Y8 114 aa15.8■□□□□ 0.12
NME3-209ENST00000566600 IGLV6-57P01721 117 aa15.77■□□□□ 0.12
NME3-209ENST00000566600 LINC00518Q8N0U6 118 aa15.77■□□□□ 0.12
NME3-209ENST00000566600 CBY1Q9Y3M2 126 aa15.77■□□□□ 0.12
NME3-209ENST00000566600 PRLHP81277 87 aa15.76■□□□□ 0.11
NME3-209ENST00000566600 LINC00337Q8N6G1 96 aa15.76■□□□□ 0.11
NME3-209ENST00000566600 SPRR1AP35321 89 aa15.75■□□□□ 0.11
NME3-209ENST00000566600 VAMP8Q9BV40 100 aa15.75■□□□□ 0.11
NME3-209ENST00000566600 MT1HL1P0DM35 61 aa15.74■□□□□ 0.11
NME3-209ENST00000566600 COX8AP10176 69 aa15.74■□□□□ 0.11
NME3-209ENST00000566600 ETDCA0A1B0GVM5 59 aa15.73■□□□□ 0.11
NME3-209ENST00000566600 MUSTN1Q8IVN3 82 aa15.72■□□□□ 0.11
NME3-209ENST00000566600 DLEU1O43261 78 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms