RNA–Protein interactions for RNA: ENST00000566221.5

SPG7-213, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 734 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-213ENST00000566221 SMIM13P0DJ93 91 aa9.47□□□□□ -0.89
SPG7-213ENST00000566221 LINC00158P58513 81 aa9.47□□□□□ -0.89
SPG7-213ENST00000566221 GAGE2BQ13066 116 aa9.47□□□□□ -0.89
SPG7-213ENST00000566221 CEND1Q8N111 149 aa9.47□□□□□ -0.89
SPG7-213ENST00000566221 IGKV2-24A0A0C4DH68 120 aa9.46□□□□□ -0.9
SPG7-213ENST00000566221 TMEM238LA0A1B0GVL6 79 aa9.45□□□□□ -0.9
SPG7-213ENST00000566221 A6NJY4 79 aa9.45□□□□□ -0.9
SPG7-213ENST00000566221 RPL24P83731 157 aaKnown RBP9.45□□□□□ -0.9
SPG7-213ENST00000566221 GAGE2EQ4V326 116 aa9.45□□□□□ -0.9
SPG7-213ENST00000566221 BVES-AS1Q5T3Y7 98 aa9.45□□□□□ -0.9
SPG7-213ENST00000566221 ADAMTSL4-AS1Q5T5F5 129 aa9.45□□□□□ -0.9
SPG7-213ENST00000566221 Q6ZSA8 131 aa9.45□□□□□ -0.9
SPG7-213ENST00000566221 GAGE2DQ9UEU5 116 aa9.45□□□□□ -0.9
SPG7-213ENST00000566221 A0A0U1RRA0 63 aa9.44□□□□□ -0.9
SPG7-213ENST00000566221 CHTF8P0CG12 524 aa9.44□□□□□ -0.9
SPG7-213ENST00000566221 SPACA4Q8TDM5 124 aa9.44□□□□□ -0.9
SPG7-213ENST00000566221 KRTAP4-5Q9BYR2 181 aa9.44□□□□□ -0.9
SPG7-213ENST00000566221 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.44□□□□□ -0.9
SPG7-213ENST00000566221 ABCA13Q86UQ4 5058 aa9.43□□□□□ -0.9
SPG7-213ENST00000566221 LOC107984156A0A0G2JMH3 177 aa9.43□□□□□ -0.9
SPG7-213ENST00000566221 ARL17AQ8IVW1 177 aa9.43□□□□□ -0.9
SPG7-213ENST00000566221 MIR7-3HGQ8N6C7 128 aa9.43□□□□□ -0.9
SPG7-213ENST00000566221 A6NDN8 102 aa9.42□□□□□ -0.9
SPG7-213ENST00000566221 PANO1I0J062 215 aa9.42□□□□□ -0.9
SPG7-213ENST00000566221 HINT1P49773 126 aaPredicted RBP9.42□□□□□ -0.9
SPG7-213ENST00000566221 LBHQ53QV2 105 aaPredicted RBP9.42□□□□□ -0.9
SPG7-213ENST00000566221 MUSTN1Q8IVN3 82 aa9.42□□□□□ -0.9
SPG7-213ENST00000566221 LINC00308Q8TCZ7 52 aa9.42□□□□□ -0.9
SPG7-213ENST00000566221 SND1-IT1Q9HBX3 110 aa9.42□□□□□ -0.9
SPG7-213ENST00000566221 XAGE1AQ9HD64 81 aa9.42□□□□□ -0.9
SPG7-213ENST00000566221 C9orf129Q5T035 196 aaKnown RBP9.41□□□□□ -0.9
SPG7-213ENST00000566221 SNHG12Q9BXW3 62 aa9.41□□□□□ -0.9
SPG7-213ENST00000566221 FAM30AQ9NZY2 134 aa9.41□□□□□ -0.9
SPG7-213ENST00000566221 DYNC1H1Q14204 4646 aaKnown RBP9.41□□□□□ -0.9
SPG7-213ENST00000566221 DAND5Q8N907 189 aa9.4□□□□□ -0.9
SPG7-213ENST00000566221 DPH3Q96FX2 82 aa9.39□□□□□ -0.91
SPG7-213ENST00000566221 LRP1BQ9NZR2 4599 aa9.39□□□□□ -0.91
SPG7-213ENST00000566221 FXYD2P54710 66 aa9.38□□□□□ -0.91
SPG7-213ENST00000566221 COL5A1-AS1Q5SY13 56 aa9.38□□□□□ -0.91
SPG7-213ENST00000566221 A0A087WYN8 130 aa9.37□□□□□ -0.91
SPG7-213ENST00000566221 A0A1B0GWB2 263 aa9.37□□□□□ -0.91
SPG7-213ENST00000566221 BATFQ16520 125 aa9.37□□□□□ -0.91
SPG7-213ENST00000566221 SCXQ7RTU7 201 aa9.37□□□□□ -0.91
SPG7-213ENST00000566221 PLAC8Q9NZF1 115 aa9.37□□□□□ -0.91
SPG7-213ENST00000566221 PLA2G2DQ9UNK4 145 aa9.37□□□□□ -0.91
SPG7-213ENST00000566221 FAM168BA1KXE4 195 aa9.36□□□□□ -0.91
SPG7-213ENST00000566221 A4D1N5 150 aa9.36□□□□□ -0.91
SPG7-213ENST00000566221 NDUFC2O95298 119 aa9.36□□□□□ -0.91
SPG7-213ENST00000566221 FAM19A5Q7Z5A7 132 aaPredicted RBP9.36□□□□□ -0.91
SPG7-213ENST00000566221 DNAH8Q96JB1 4490 aa9.36□□□□□ -0.91
SPG7-213ENST00000566221 A0A0B4J2C4 111 aa9.35□□□□□ -0.91
SPG7-213ENST00000566221 CDK2AP2O75956 126 aa9.35□□□□□ -0.91
SPG7-213ENST00000566221 NPC2P61916 151 aa9.35□□□□□ -0.91
SPG7-213ENST00000566221 SOSTDC1Q6X4U4 206 aa9.35□□□□□ -0.91
SPG7-213ENST00000566221 CIRBP-AS1Q8TBR5 109 aa9.35□□□□□ -0.91
SPG7-213ENST00000566221 A0A1W2PNN7 141 aa9.34□□□□□ -0.91
SPG7-213ENST00000566221 EPM2AB3EWF7 344 aa9.34□□□□□ -0.91
SPG7-213ENST00000566221 SERTAD4-AS1Q5TG53 156 aa9.34□□□□□ -0.91
SPG7-213ENST00000566221 IGLV5-37A0A075B6J1 123 aa9.33□□□□□ -0.92
SPG7-213ENST00000566221 M0QXV9 152 aa9.33□□□□□ -0.92
SPG7-213ENST00000566221 CFC1BP0CG36 223 aa9.33□□□□□ -0.92
SPG7-213ENST00000566221 CFC1P0CG37 223 aa9.33□□□□□ -0.92
SPG7-213ENST00000566221 HAMPP81172 84 aa9.33□□□□□ -0.92
SPG7-213ENST00000566221 NKAPP1Q8N9T2 125 aa9.33□□□□□ -0.92
SPG7-213ENST00000566221 NHP2Q9NX24 153 aaKnown RBP9.33□□□□□ -0.92
SPG7-213ENST00000566221 VPREB1P12018 145 aa9.32□□□□□ -0.92
SPG7-213ENST00000566221 XGP55808 180 aa9.32□□□□□ -0.92
SPG7-213ENST00000566221 KRTAP7-1Q8IUC3 87 aa9.32□□□□□ -0.92
SPG7-213ENST00000566221 RAB37Q96AX2 223 aa9.32□□□□□ -0.92
SPG7-213ENST00000566221 TRAV13-2A0A0B4J235 113 aa9.31□□□□□ -0.92
SPG7-213ENST00000566221 EIF4EBP3O60516 100 aaPredicted RBP9.31□□□□□ -0.92
SPG7-213ENST00000566221 PRO1854Q9UHT4 67 aa9.31□□□□□ -0.92
SPG7-213ENST00000566221 Q8NDZ9 215 aa9.3□□□□□ -0.92
SPG7-213ENST00000566221 APOBP04114 4563 aaKnown RBP9.3□□□□□ -0.92
SPG7-213ENST00000566221 TRBV10-2A0A0K0K1G8 114 aa9.29□□□□□ -0.92
SPG7-213ENST00000566221 C22orf24Q9Y442 160 aa9.29□□□□□ -0.92
SPG7-213ENST00000566221 PHF5AQ7RTV0 110 aaKnown RBP9.28□□□□□ -0.92
SPG7-213ENST00000566221 MRPL55Q7Z7F7 128 aaKnown RBP9.28□□□□□ -0.92
SPG7-213ENST00000566221 M0R378 163 aa9.27□□□□□ -0.93
SPG7-213ENST00000566221 NCR3O14931 201 aa9.27□□□□□ -0.93
SPG7-213ENST00000566221 C7orf33Q8WU49 177 aa9.27□□□□□ -0.93
SPG7-213ENST00000566221 CBY1Q9Y3M2 126 aa9.26□□□□□ -0.93
SPG7-213ENST00000566221 IGKV2-28A0A075B6P5 120 aa9.25□□□□□ -0.93
SPG7-213ENST00000566221 C9orf118A6NHY6 69 aa9.25□□□□□ -0.93
SPG7-213ENST00000566221 K7ERJ3 54 aa9.25□□□□□ -0.93
SPG7-213ENST00000566221 TAX1BP3O14907 124 aa9.25□□□□□ -0.93
SPG7-213ENST00000566221 IGKV2D-28P01615 120 aa9.25□□□□□ -0.93
SPG7-213ENST00000566221 TMEM126AQ9H061 195 aa9.25□□□□□ -0.93
SPG7-213ENST00000566221 GAGE10A6NGK3 116 aa9.24□□□□□ -0.93
SPG7-213ENST00000566221 UBE2BP63146 152 aa9.24□□□□□ -0.93
SPG7-213ENST00000566221 PRR3P79522 188 aaKnown RBP9.24□□□□□ -0.93
SPG7-213ENST00000566221 LINC00167Q96N53 147 aa9.24□□□□□ -0.93
SPG7-213ENST00000566221 RPL13AP40429 203 aaKnown RBP9.22□□□□□ -0.93
SPG7-213ENST00000566221 LINC00528Q8N1L1 170 aa9.22□□□□□ -0.93
SPG7-213ENST00000566221 LINC00337Q8N6G1 96 aa9.22□□□□□ -0.93
SPG7-213ENST00000566221 SMR3BP02814 79 aaPredicted RBP9.21□□□□□ -0.94
SPG7-213ENST00000566221 S100A7L2Q5SY68 101 aa9.21□□□□□ -0.94
SPG7-213ENST00000566221 LYRM7Q5U5X0 104 aa9.21□□□□□ -0.94
SPG7-213ENST00000566221 OR13C6PQ8NH95 151 aa9.21□□□□□ -0.94
SPG7-213ENST00000566221 IGLV1-50A0A075B6I6 118 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 602 ms