RNA–Protein interactions for RNA: ENST00000564557.1

CNOT1-206, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-206ENST00000564557 LCE3BQ5TA77 95 aa8.37□□□□□ -1.07
CNOT1-206ENST00000564557 KRTAP11-1Q8IUC1 163 aa8.37□□□□□ -1.07
CNOT1-206ENST00000564557 PLA2G2DQ9UNK4 145 aa8.37□□□□□ -1.07
CNOT1-206ENST00000564557 RPL24P83731 157 aaKnown RBP8.36□□□□□ -1.07
CNOT1-206ENST00000564557 ODF1Q14990 250 aa8.36□□□□□ -1.07
CNOT1-206ENST00000564557 MAP1LC3CQ9BXW4 147 aa8.36□□□□□ -1.07
CNOT1-206ENST00000564557 GAGE10A6NGK3 116 aa8.35□□□□□ -1.07
CNOT1-206ENST00000564557 PLNP26678 52 aa8.35□□□□□ -1.07
CNOT1-206ENST00000564557 LINC00310P59036 64 aa8.35□□□□□ -1.07
CNOT1-206ENST00000564557 ANKRD39Q53RE8 183 aa8.35□□□□□ -1.07
CNOT1-206ENST00000564557 MEIG1Q5JSS6 88 aa8.35□□□□□ -1.07
CNOT1-206ENST00000564557 LINC00167Q96N53 147 aa8.35□□□□□ -1.07
CNOT1-206ENST00000564557 SND1-IT1Q9HBX3 110 aa8.35□□□□□ -1.07
CNOT1-206ENST00000564557 RPL37AP8A6NKH3 93 aa8.34□□□□□ -1.07
CNOT1-206ENST00000564557 LINC00587B1AMM8 73 aa8.34□□□□□ -1.07
CNOT1-206ENST00000564557 DPM2O94777 84 aa8.34□□□□□ -1.07
CNOT1-206ENST00000564557 MT1HL1P0DM35 61 aa8.34□□□□□ -1.07
CNOT1-206ENST00000564557 HERVK_113P61574 105 aa8.34□□□□□ -1.07
CNOT1-206ENST00000564557 A0A0U1RRA0 63 aa8.33□□□□□ -1.08
CNOT1-206ENST00000564557 MYMXA0A1B0GTQ4 84 aa8.33□□□□□ -1.08
CNOT1-206ENST00000564557 H0Y9J4 135 aa8.33□□□□□ -1.08
CNOT1-206ENST00000564557 HERV-K104P63124 156 aa8.33□□□□□ -1.08
CNOT1-206ENST00000564557 IGLV5-37A0A075B6J1 123 aa8.32□□□□□ -1.08
CNOT1-206ENST00000564557 HIST1H2BKO60814 126 aa8.32□□□□□ -1.08
CNOT1-206ENST00000564557 IGKCP01834 107 aa8.32□□□□□ -1.08
CNOT1-206ENST00000564557 HIST1H2BJP06899 126 aa8.32□□□□□ -1.08
CNOT1-206ENST00000564557 HIST1H2BOP23527 126 aa8.32□□□□□ -1.08
CNOT1-206ENST00000564557 HIST1H2BBP33778 126 aa8.32□□□□□ -1.08
CNOT1-206ENST00000564557 HIST1H2BDP58876 126 aa8.32□□□□□ -1.08
CNOT1-206ENST00000564557 HIST1H2BCP62807 126 aa8.32□□□□□ -1.08
CNOT1-206ENST00000564557 HIST2H2BEQ16778 126 aa8.32□□□□□ -1.08
CNOT1-206ENST00000564557 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.32□□□□□ -1.08
CNOT1-206ENST00000564557 HIST1H2BHQ93079 126 aa8.32□□□□□ -1.08
CNOT1-206ENST00000564557 PLEKHB2Q96CS7 222 aa8.32□□□□□ -1.08
CNOT1-206ENST00000564557 HIST1H2BNQ99877 126 aa8.32□□□□□ -1.08
CNOT1-206ENST00000564557 HIST1H2BMQ99879 126 aa8.32□□□□□ -1.08
CNOT1-206ENST00000564557 NDUFA12Q9UI09 145 aa8.32□□□□□ -1.08
CNOT1-206ENST00000564557 ZNF861PO60384 105 aa8.31□□□□□ -1.08
CNOT1-206ENST00000564557 RPL28P46779 137 aaKnown RBP8.31□□□□□ -1.08
CNOT1-206ENST00000564557 PMCHL2Q9BQD1 86 aa8.31□□□□□ -1.08
CNOT1-206ENST00000564557 LEPROTO15243 131 aa8.3□□□□□ -1.08
CNOT1-206ENST00000564557 BCE1O60756 84 aa8.3□□□□□ -1.08
CNOT1-206ENST00000564557 SMIM13P0DJ93 91 aa8.3□□□□□ -1.08
CNOT1-206ENST00000564557 IGKV2-28A0A075B6P5 120 aa8.29□□□□□ -1.08
CNOT1-206ENST00000564557 IGKV2D-28P01615 120 aa8.29□□□□□ -1.08
CNOT1-206ENST00000564557 LGALS3P17931 250 aaKnown RBP8.29□□□□□ -1.08
CNOT1-206ENST00000564557 UBE2AP49459 152 aa8.29□□□□□ -1.08
CNOT1-206ENST00000564557 VPREB1P12018 145 aa8.28□□□□□ -1.08
CNOT1-206ENST00000564557 KRTAP10-8P60410 259 aa8.28□□□□□ -1.08
CNOT1-206ENST00000564557 J3QQQ9 107 aa8.27□□□□□ -1.09
CNOT1-206ENST00000564557 MIR7-3HGQ8N6C7 128 aa8.27□□□□□ -1.09
CNOT1-206ENST00000564557 SYS1-DBNDD2H3BUS1 97 aa8.26□□□□□ -1.09
CNOT1-206ENST00000564557 NMUP48645 174 aa8.26□□□□□ -1.09
CNOT1-206ENST00000564557 BOD1L2Q8IYS8 172 aa8.26□□□□□ -1.09
CNOT1-206ENST00000564557 IGLV1-50A0A075B6I6 118 aa8.25□□□□□ -1.09
CNOT1-206ENST00000564557 PRR26Q8N8Z3 221 aa8.25□□□□□ -1.09
CNOT1-206ENST00000564557 M0R378 163 aa8.24□□□□□ -1.09
CNOT1-206ENST00000564557 S100A1P23297 94 aa8.24□□□□□ -1.09
CNOT1-206ENST00000564557 PET117Q6UWS5 81 aa8.24□□□□□ -1.09
CNOT1-206ENST00000564557 FAM19A1Q7Z5A9 133 aa8.24□□□□□ -1.09
CNOT1-206ENST00000564557 MIEN1Q9BRT3 115 aa8.24□□□□□ -1.09
CNOT1-206ENST00000564557 RPL13AP40429 203 aaKnown RBP8.23□□□□□ -1.09
CNOT1-206ENST00000564557 TSPEAR-AS2P59090 65 aa8.23□□□□□ -1.09
CNOT1-206ENST00000564557 S100A12P80511 92 aa8.23□□□□□ -1.09
CNOT1-206ENST00000564557 TMEM126AQ9H061 195 aa8.22□□□□□ -1.09
CNOT1-206ENST00000564557 TMEM238C9JI98 176 aa8.21□□□□□ -1.1
CNOT1-206ENST00000564557 E9PLD3 99 aa8.21□□□□□ -1.1
CNOT1-206ENST00000564557 KRTDAPP60985 99 aa8.21□□□□□ -1.1
CNOT1-206ENST00000564557 COA6Q5JTJ3 125 aaKnown RBP8.21□□□□□ -1.1
CNOT1-206ENST00000564557 IGKV2D-26A0A0A0MRZ7 120 aa8.2□□□□□ -1.1
CNOT1-206ENST00000564557 C20orf202A1L168 122 aa8.2□□□□□ -1.1
CNOT1-206ENST00000564557 NCR3O14931 201 aa8.2□□□□□ -1.1
CNOT1-206ENST00000564557 KRTAP1-4P0C5Y4 121 aa8.2□□□□□ -1.1
CNOT1-206ENST00000564557 LINC01545Q5VT33 79 aa8.2□□□□□ -1.1
CNOT1-206ENST00000564557 DAND5Q8N907 189 aa8.2□□□□□ -1.1
CNOT1-206ENST00000564557 Q8NDZ9 215 aa8.2□□□□□ -1.1
CNOT1-206ENST00000564557 TNXBP22105 4242 aa8.2□□□□□ -1.1
CNOT1-206ENST00000564557 C3orf79P0CE67 100 aa8.19□□□□□ -1.1
CNOT1-206ENST00000564557 PRLHP81277 87 aa8.19□□□□□ -1.1
CNOT1-206ENST00000564557 KRTAP9-9Q9BYP9 154 aa8.18□□□□□ -1.1
CNOT1-206ENST00000564557 KRTAP9-4Q9BYQ2 154 aa8.18□□□□□ -1.1
CNOT1-206ENST00000564557 PRYO14603 147 aa8.17□□□□□ -1.1
CNOT1-206ENST00000564557 CRYGAP11844 174 aa8.17□□□□□ -1.1
CNOT1-206ENST00000564557 A0A0J9YXY3 114 aa8.16□□□□□ -1.1
CNOT1-206ENST00000564557 AKR1D1P51857 326 aa8.16□□□□□ -1.1
CNOT1-206ENST00000564557 KRTAP13-1Q8IUC0 172 aa8.16□□□□□ -1.1
CNOT1-206ENST00000564557 HIGD2AQ9BW72 106 aa8.16□□□□□ -1.1
CNOT1-206ENST00000564557 LOC107984156A0A0G2JMH3 177 aa8.15□□□□□ -1.1
CNOT1-206ENST00000564557 ETDCA0A1B0GVM5 59 aa8.15□□□□□ -1.1
CNOT1-206ENST00000564557 S100A2P29034 98 aa8.15□□□□□ -1.1
CNOT1-206ENST00000564557 NPC2P61916 151 aa8.15□□□□□ -1.1
CNOT1-206ENST00000564557 S100A7L2Q5SY68 101 aa8.15□□□□□ -1.1
CNOT1-206ENST00000564557 ARL17AQ8IVW1 177 aa8.15□□□□□ -1.1
CNOT1-206ENST00000564557 TRBV10-3A0A0K0K1G6 114 aa8.14□□□□□ -1.11
CNOT1-206ENST00000564557 TRBV10-2A0A0K0K1G8 114 aa8.14□□□□□ -1.11
CNOT1-206ENST00000564557 ZNF815PA8K554 130 aa8.14□□□□□ -1.11
CNOT1-206ENST00000564557 TYMSOSQ8TAI1 123 aa8.14□□□□□ -1.11
CNOT1-206ENST00000564557 SPANXB1Q9NS25 103 aaPredicted RBP8.14□□□□□ -1.11
CNOT1-206ENST00000564557 S100A6P06703 90 aa8.13□□□□□ -1.11
CNOT1-206ENST00000564557 DDTP30046 118 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 87.6 ms