RNA–Protein interactions for RNA: ENST00000564354.1

AP000842.3-201, humanhuman

TSL 3 BASIC

Gene AP000842.3, Length 808 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000842.3-201ENST00000564354 G3V3Q6 166 aa3.48□□□□□ -1.85
AP000842.3-201ENST00000564354 FOXA3P55318 350 aaPredicted RBP3.48□□□□□ -1.85
AP000842.3-201ENST00000564354 CCL20P78556 96 aa3.48□□□□□ -1.85
AP000842.3-201ENST00000564354 TMEM241Q24JQ0 296 aa3.48□□□□□ -1.85
AP000842.3-201ENST00000564354 C6orf99Q4VX62 202 aa3.48□□□□□ -1.85
AP000842.3-201ENST00000564354 OR10D4PQ8NGN7 298 aa3.48□□□□□ -1.85
AP000842.3-201ENST00000564354 RETNLBQ9BQ08 111 aa3.48□□□□□ -1.85
AP000842.3-201ENST00000564354 MANBALQ9NQG1 85 aa3.48□□□□□ -1.85
AP000842.3-201ENST00000564354 MED9Q9NWA0 146 aa3.48□□□□□ -1.85
AP000842.3-201ENST00000564354 MRPL35Q9NZE8 188 aaKnown RBP3.48□□□□□ -1.85
AP000842.3-201ENST00000564354 IGHV6-1A0A0B4J1U7 121 aa3.47□□□□□ -1.85
AP000842.3-201ENST00000564354 ZNF861PO60384 105 aa3.47□□□□□ -1.85
AP000842.3-201ENST00000564354 CRYGAP11844 174 aa3.47□□□□□ -1.85
AP000842.3-201ENST00000564354 UNQ6190/PRO20217Q6UXQ8 127 aa3.47□□□□□ -1.85
AP000842.3-201ENST00000564354 BORCS7Q96B45 105 aa3.47□□□□□ -1.85
AP000842.3-201ENST00000564354 RPP21Q9H633 154 aaKnown RBP3.47□□□□□ -1.85
AP000842.3-201ENST00000564354 CYTL1Q9NRR1 136 aa3.47□□□□□ -1.85
AP000842.3-201ENST00000564354 CRCT1Q9UGL9 99 aa3.47□□□□□ -1.85
AP000842.3-201ENST00000564354 PRO0628Q9UI54 55 aa3.47□□□□□ -1.85
AP000842.3-201ENST00000564354 A0A0J9YXY3 114 aa3.46□□□□□ -1.86
AP000842.3-201ENST00000564354 TRBV6-5A0A0K0K1A5 114 aa3.46□□□□□ -1.86
AP000842.3-201ENST00000564354 PDE6DO43924 150 aa3.46□□□□□ -1.86
AP000842.3-201ENST00000564354 HERVK_113P61574 105 aa3.46□□□□□ -1.86
AP000842.3-201ENST00000564354 Q1RN00 199 aa3.46□□□□□ -1.86
AP000842.3-201ENST00000564354 C1orf195Q5TG92 126 aa3.46□□□□□ -1.86
AP000842.3-201ENST00000564354 COMMD7Q86VX2 200 aa3.46□□□□□ -1.86
AP000842.3-201ENST00000564354 CNFNQ9BYD5 112 aa3.46□□□□□ -1.86
AP000842.3-201ENST00000564354 RNASE7Q9H1E1 156 aaKnown RBP3.46□□□□□ -1.86
AP000842.3-201ENST00000564354 SMDT1Q9H4I9 107 aa3.46□□□□□ -1.86
AP000842.3-201ENST00000564354 TRBV27A0A0K0K1C4 114 aa3.45□□□□□ -1.86
AP000842.3-201ENST00000564354 KANTRA0A1W2PQU2 76 aa3.45□□□□□ -1.86
AP000842.3-201ENST00000564354 NUPR1O60356 82 aa3.45□□□□□ -1.86
AP000842.3-201ENST00000564354 TLX1NBP0CAT3 122 aa3.45□□□□□ -1.86
AP000842.3-201ENST00000564354 RPL28P46779 137 aaKnown RBP3.45□□□□□ -1.86
AP000842.3-201ENST00000564354 RAB5BP61020 215 aa3.45□□□□□ -1.86
AP000842.3-201ENST00000564354 S100A12P80511 92 aa3.45□□□□□ -1.86
AP000842.3-201ENST00000564354 PMVKQ15126 192 aa3.45□□□□□ -1.86
AP000842.3-201ENST00000564354 Q6ZUT4 128 aa3.45□□□□□ -1.86
AP000842.3-201ENST00000564354 RBM12B-AS1Q9P1G2 102 aa3.45□□□□□ -1.86
AP000842.3-201ENST00000564354 C6orf48Q9UBA6 75 aa3.45□□□□□ -1.86
AP000842.3-201ENST00000564354 UBE2D4Q9Y2X8 147 aa3.45□□□□□ -1.86
AP000842.3-201ENST00000564354 TRBV20OR9-2A0A075B6H5 130 aa3.44□□□□□ -1.86
AP000842.3-201ENST00000564354 A8MWL6 223 aa3.44□□□□□ -1.86
AP000842.3-201ENST00000564354 PSMB2P49721 201 aa3.44□□□□□ -1.86
AP000842.3-201ENST00000564354 POLR2KP53803 58 aaKnown RBP3.44□□□□□ -1.86
AP000842.3-201ENST00000564354 NDUFC2-KCTD14E9PQ53 114 aa3.43□□□□□ -1.86
AP000842.3-201ENST00000564354 PPP1R17O96001 155 aa3.43□□□□□ -1.86
AP000842.3-201ENST00000564354 RPL23P62829 140 aaKnown RBP3.43□□□□□ -1.86
AP000842.3-201ENST00000564354 IFITM2Q01629 132 aa3.43□□□□□ -1.86
AP000842.3-201ENST00000564354 TPRXLQ17RH7 258 aa3.43□□□□□ -1.86
AP000842.3-201ENST00000564354 SLC51BQ86UW2 128 aa3.43□□□□□ -1.86
AP000842.3-201ENST00000564354 LINC00304Q8N9R0 145 aa3.43□□□□□ -1.86
AP000842.3-201ENST00000564354 C22orf24Q9Y442 160 aa3.43□□□□□ -1.86
AP000842.3-201ENST00000564354 IGKV2D-26A0A0A0MRZ7 120 aa3.42□□□□□ -1.86
AP000842.3-201ENST00000564354 TRBV30A0A0K0K1B3 111 aa3.42□□□□□ -1.86
AP000842.3-201ENST00000564354 A0A1B0GUT8 65 aa3.42□□□□□ -1.86
AP000842.3-201ENST00000564354 LINC00614P0C842 121 aa3.42□□□□□ -1.86
AP000842.3-201ENST00000564354 HBBP68871 147 aa3.42□□□□□ -1.86
AP000842.3-201ENST00000564354 C9orf129Q5T035 196 aaKnown RBP3.42□□□□□ -1.86
AP000842.3-201ENST00000564354 C2orf82Q6UX34 121 aa3.42□□□□□ -1.86
AP000842.3-201ENST00000564354 AMN1Q8IY45 258 aa3.42□□□□□ -1.86
AP000842.3-201ENST00000564354 TIMM21Q9BVV7 248 aa3.42□□□□□ -1.86
AP000842.3-201ENST00000564354 TMEM191AQ9H0A3 160 aa3.42□□□□□ -1.86
AP000842.3-201ENST00000564354 LOC389332A0A1B0GUA5 103 aa3.41□□□□□ -1.86
AP000842.3-201ENST00000564354 BCE1O60756 84 aa3.41□□□□□ -1.86
AP000842.3-201ENST00000564354 UBE2AP49459 152 aa3.41□□□□□ -1.86
AP000842.3-201ENST00000564354 CKS1BP61024 79 aa3.41□□□□□ -1.86
AP000842.3-201ENST00000564354 RPL39P62891 51 aaKnown RBP3.41□□□□□ -1.86
AP000842.3-201ENST00000564354 ZNF345Q14585 488 aa3.41□□□□□ -1.86
AP000842.3-201ENST00000564354 ORMDL2Q53FV1 153 aa3.41□□□□□ -1.86
AP000842.3-201ENST00000564354 XAGE1AQ9HD64 81 aa3.41□□□□□ -1.86
AP000842.3-201ENST00000564354 TOMM7Q9P0U1 55 aa3.41□□□□□ -1.86
AP000842.3-201ENST00000564354 FSIP2Q5CZC0 6907 aa3.4□□□□□ -1.86
AP000842.3-201ENST00000564354 ZNF727A8MUV8 499 aa3.4□□□□□ -1.87
AP000842.3-201ENST00000564354 HIGD1CA8MV81 97 aa3.4□□□□□ -1.87
AP000842.3-201ENST00000564354 KRTAP13-2Q52LG2 175 aa3.4□□□□□ -1.87
AP000842.3-201ENST00000564354 SPANXA1Q9NS26 97 aa3.4□□□□□ -1.87
AP000842.3-201ENST00000564354 TMEM250H0YL14 139 aa3.39□□□□□ -1.87
AP000842.3-201ENST00000564354 TIMM17AQ99595 171 aa3.39□□□□□ -1.87
AP000842.3-201ENST00000564354 HMSDA8MTL9 139 aa3.38□□□□□ -1.87
AP000842.3-201ENST00000564354 CKS2P33552 79 aa3.38□□□□□ -1.87
AP000842.3-201ENST00000564354 IFI27P40305 119 aaPredicted RBP3.38□□□□□ -1.87
AP000842.3-201ENST00000564354 MRPS36P82909 103 aaKnown RBP3.38□□□□□ -1.87
AP000842.3-201ENST00000564354 FAM229BQ4G0N7 80 aa3.38□□□□□ -1.87
AP000842.3-201ENST00000564354 CEND1Q8N111 149 aa3.38□□□□□ -1.87
AP000842.3-201ENST00000564354 SIGMAR1Q99720 223 aa3.38□□□□□ -1.87
AP000842.3-201ENST00000564354 C20orf78Q9BR46 151 aa3.38□□□□□ -1.87
AP000842.3-201ENST00000564354 GNB1LQ9BYB4 327 aa3.38□□□□□ -1.87
AP000842.3-201ENST00000564354 BATF3Q9NR55 127 aa3.38□□□□□ -1.87
AP000842.3-201ENST00000564354 TP73-AS1Q9UF72 201 aa3.38□□□□□ -1.87
AP000842.3-201ENST00000564354 A0A1B0GV72 72 aa3.37□□□□□ -1.87
AP000842.3-201ENST00000564354 MRPL51Q4U2R6 128 aaKnown RBP3.37□□□□□ -1.87
AP000842.3-201ENST00000564354 SCGB1D4Q6XE38 83 aa3.37□□□□□ -1.87
AP000842.3-201ENST00000564354 FAM19A3Q7Z5A8 133 aa3.37□□□□□ -1.87
AP000842.3-201ENST00000564354 CAMK2N1Q7Z7J9 78 aa3.37□□□□□ -1.87
AP000842.3-201ENST00000564354 C2orf88Q9BSF0 95 aa3.37□□□□□ -1.87
AP000842.3-201ENST00000564354 LINC00862A6NCI5 91 aa3.36□□□□□ -1.87
AP000842.3-201ENST00000564354 DDTP30046 118 aa3.36□□□□□ -1.87
AP000842.3-201ENST00000564354 ASB16-AS1Q495Z4 193 aa3.36□□□□□ -1.87
AP000842.3-201ENST00000564354 FAM104BQ5XKR9 115 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms