RNA–Protein interactions for RNA: ENST00000563917.2

CLN6-203, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 557 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-203ENST00000563917 CTAG1AP78358 180 aa5.59□□□□□ -1.51
CLN6-203ENST00000563917 IFITM2Q01629 132 aa5.59□□□□□ -1.51
CLN6-203ENST00000563917 PMCHL1Q16048 86 aa5.59□□□□□ -1.51
CLN6-203ENST00000563917 KRTAP13-2Q52LG2 175 aa5.59□□□□□ -1.51
CLN6-203ENST00000563917 C4orf48Q5BLP8 95 aa5.59□□□□□ -1.51
CLN6-203ENST00000563917 CDIP1Q9H305 208 aa5.59□□□□□ -1.51
CLN6-203ENST00000563917 ZNF706Q9Y5V0 76 aaPredicted RBP5.59□□□□□ -1.51
CLN6-203ENST00000563917 A0A096LNJ9 63 aa5.58□□□□□ -1.52
CLN6-203ENST00000563917 C11orf86A6NJI1 115 aa5.58□□□□□ -1.52
CLN6-203ENST00000563917 LINC00587B1AMM8 73 aa5.58□□□□□ -1.52
CLN6-203ENST00000563917 M0R378 163 aa5.58□□□□□ -1.52
CLN6-203ENST00000563917 MEIG1Q5JSS6 88 aa5.58□□□□□ -1.52
CLN6-203ENST00000563917 C10orf91Q5T1B1 145 aa5.58□□□□□ -1.52
CLN6-203ENST00000563917 A0A0U1RRA0 63 aa5.57□□□□□ -1.52
CLN6-203ENST00000563917 SNAPINO95295 136 aa5.57□□□□□ -1.52
CLN6-203ENST00000563917 APOC3P02656 99 aa5.57□□□□□ -1.52
CLN6-203ENST00000563917 SPAG11AQ6PDA7 123 aa5.57□□□□□ -1.52
CLN6-203ENST00000563917 PLEKHB2Q96CS7 222 aa5.57□□□□□ -1.52
CLN6-203ENST00000563917 RETNLBQ9BQ08 111 aa5.57□□□□□ -1.52
CLN6-203ENST00000563917 IGLV7-46A0A075B6I9 117 aa5.56□□□□□ -1.52
CLN6-203ENST00000563917 HERV-K104P63124 156 aa5.56□□□□□ -1.52
CLN6-203ENST00000563917 SVBPQ8N300 66 aa5.56□□□□□ -1.52
CLN6-203ENST00000563917 IFI27L1Q96BM0 104 aa5.56□□□□□ -1.52
CLN6-203ENST00000563917 CHCHD1Q96BP2 118 aaKnown RBP5.56□□□□□ -1.52
CLN6-203ENST00000563917 URB1-AS1Q96HZ7 61 aa5.56□□□□□ -1.52
CLN6-203ENST00000563917 MAP1LC3CQ9BXW4 147 aa5.56□□□□□ -1.52
CLN6-203ENST00000563917 TRAV12-1A0A0B4J245 112 aa5.55□□□□□ -1.52
CLN6-203ENST00000563917 BOD1L2Q8IYS8 172 aa5.55□□□□□ -1.52
CLN6-203ENST00000563917 ETDCA0A1B0GVM5 59 aa5.54□□□□□ -1.52
CLN6-203ENST00000563917 TMEM223A0PJW6 202 aa5.54□□□□□ -1.52
CLN6-203ENST00000563917 PRYO14603 147 aa5.54□□□□□ -1.52
CLN6-203ENST00000563917 SMIM13P0DJ93 91 aa5.54□□□□□ -1.52
CLN6-203ENST00000563917 TPRXLQ17RH7 258 aa5.54□□□□□ -1.52
CLN6-203ENST00000563917 MYMXA0A1B0GTQ4 84 aa5.53□□□□□ -1.52
CLN6-203ENST00000563917 HSBP1O75506 76 aa5.53□□□□□ -1.52
CLN6-203ENST00000563917 C3orf22Q8N5N4 141 aa5.53□□□□□ -1.52
CLN6-203ENST00000563917 MIR7-3HGQ8N6C7 128 aa5.53□□□□□ -1.52
CLN6-203ENST00000563917 SPRR4Q96PI1 79 aa5.53□□□□□ -1.52
CLN6-203ENST00000563917 LINC00337Q8N6G1 96 aa5.52□□□□□ -1.53
CLN6-203ENST00000563917 PPDPFQ9H3Y8 114 aa5.52□□□□□ -1.53
CLN6-203ENST00000563917 NDUFA12Q9UI09 145 aa5.52□□□□□ -1.53
CLN6-203ENST00000563917 H0Y8G0 127 aa5.51□□□□□ -1.53
CLN6-203ENST00000563917 NCR3O14931 201 aa5.51□□□□□ -1.53
CLN6-203ENST00000563917 Q8NDZ9 215 aa5.51□□□□□ -1.53
CLN6-203ENST00000563917 MIEN1Q9BRT3 115 aa5.51□□□□□ -1.53
CLN6-203ENST00000563917 HERVK_113P61574 105 aa5.5□□□□□ -1.53
CLN6-203ENST00000563917 FP248Q71RG6 208 aaPredicted RBP5.5□□□□□ -1.53
CLN6-203ENST00000563917 SMCR5Q8TEV8 140 aa5.5□□□□□ -1.53
CLN6-203ENST00000563917 KCNQ1DNQ9H478 68 aa5.5□□□□□ -1.53
CLN6-203ENST00000563917 TRBV10-3A0A0K0K1G6 114 aa5.49□□□□□ -1.53
CLN6-203ENST00000563917 LEPROTL1O95214 131 aa5.49□□□□□ -1.53
CLN6-203ENST00000563917 FAM19A2Q8N3H0 131 aa5.49□□□□□ -1.53
CLN6-203ENST00000563917 Q8NBF4 154 aa5.49□□□□□ -1.53
CLN6-203ENST00000563917 MUC2Q02817 5179 aa5.48□□□□□ -1.53
CLN6-203ENST00000563917 SPINK1P00995 79 aa5.48□□□□□ -1.53
CLN6-203ENST00000563917 PLNP26678 52 aa5.48□□□□□ -1.53
CLN6-203ENST00000563917 GAGE2AQ6NT46 116 aa5.48□□□□□ -1.53
CLN6-203ENST00000563917 TRBV10-2A0A0K0K1G8 114 aa5.47□□□□□ -1.53
CLN6-203ENST00000563917 LEPROTO15243 131 aa5.47□□□□□ -1.53
CLN6-203ENST00000563917 LGALS3P17931 250 aaKnown RBP5.47□□□□□ -1.53
CLN6-203ENST00000563917 DDTP30046 118 aa5.47□□□□□ -1.53
CLN6-203ENST00000563917 SPRR1AP35321 89 aa5.47□□□□□ -1.53
CLN6-203ENST00000563917 S100A7L2Q5SY68 101 aa5.47□□□□□ -1.53
CLN6-203ENST00000563917 DAND5Q8N907 189 aa5.47□□□□□ -1.53
CLN6-203ENST00000563917 HSPB8Q9UJY1 196 aa5.47□□□□□ -1.53
CLN6-203ENST00000563917 NMUP48645 174 aa5.46□□□□□ -1.54
CLN6-203ENST00000563917 JOSD1Q15040 202 aaPredicted RBP5.46□□□□□ -1.54
CLN6-203ENST00000563917 CBY1Q9Y3M2 126 aa5.46□□□□□ -1.54
CLN6-203ENST00000563917 IGLV9-49A0A0B4J1Y8 123 aa5.45□□□□□ -1.54
CLN6-203ENST00000563917 J3QQQ9 107 aa5.45□□□□□ -1.54
CLN6-203ENST00000563917 DPM2O94777 84 aa5.45□□□□□ -1.54
CLN6-203ENST00000563917 HINT1P49773 126 aaPredicted RBP5.45□□□□□ -1.54
CLN6-203ENST00000563917 SSBP3-AS1Q7Z2R9 100 aa5.45□□□□□ -1.54
CLN6-203ENST00000563917 SPANXB1Q9NS25 103 aaPredicted RBP5.45□□□□□ -1.54
CLN6-203ENST00000563917 B5MCH6 92 aa5.44□□□□□ -1.54
CLN6-203ENST00000563917 TRGC2P03986 189 aa5.44□□□□□ -1.54
CLN6-203ENST00000563917 FABP4P15090 132 aa5.44□□□□□ -1.54
CLN6-203ENST00000563917 MOBPQ13875 183 aa5.44□□□□□ -1.54
CLN6-203ENST00000563917 LINC00483Q53H64 154 aa5.44□□□□□ -1.54
CLN6-203ENST00000563917 LOC107984156A0A0G2JMH3 177 aa5.43□□□□□ -1.54
CLN6-203ENST00000563917 KRTAP4-16G5E9R7 235 aaPredicted RBP5.43□□□□□ -1.54
CLN6-203ENST00000563917 SERF1AO75920 110 aa5.43□□□□□ -1.54
CLN6-203ENST00000563917 NDUFC2O95298 119 aa5.43□□□□□ -1.54
CLN6-203ENST00000563917 IGKCP01834 107 aa5.43□□□□□ -1.54
CLN6-203ENST00000563917 Q6ZRX8 168 aa5.43□□□□□ -1.54
CLN6-203ENST00000563917 ARL17AQ8IVW1 177 aa5.43□□□□□ -1.54
CLN6-203ENST00000563917 YPEL4Q96NS1 127 aa5.43□□□□□ -1.54
CLN6-203ENST00000563917 TRAV23DV6A0A075B6W5 121 aa5.42□□□□□ -1.54
CLN6-203ENST00000563917 SLC25A20O43772 301 aa5.42□□□□□ -1.54
CLN6-203ENST00000563917 TSPEAR-AS2P59090 65 aa5.42□□□□□ -1.54
CLN6-203ENST00000563917 SEC61BP60468 96 aaKnown RBP5.42□□□□□ -1.54
CLN6-203ENST00000563917 RPS29P62273 56 aaKnown RBP5.42□□□□□ -1.54
CLN6-203ENST00000563917 C9orf153Q5TBE3 101 aa5.42□□□□□ -1.54
CLN6-203ENST00000563917 ZNF73O43830 326 aaPredicted RBP5.4□□□□□ -1.54
CLN6-203ENST00000563917 ERC2-IT1O76042 136 aa5.4□□□□□ -1.54
CLN6-203ENST00000563917 IGLV6-57P01721 117 aa5.4□□□□□ -1.54
CLN6-203ENST00000563917 KRTAP13-3Q3SY46 172 aa5.4□□□□□ -1.54
CLN6-203ENST00000563917 SLC25A34Q6PIV7 304 aa5.4□□□□□ -1.54
CLN6-203ENST00000563917 PMCHL2Q9BQD1 86 aa5.4□□□□□ -1.54
CLN6-203ENST00000563917 KRTAP9-2Q9BYQ4 174 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms