RNA–Protein interactions for RNA: ENST00000563759.1

LINC01960-201, Transcript of long intergenic non-protein coding RNA 1960, humanhuman

BASIC

Gene LINC01960, Length 1,884 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01960-201ENST00000563759 A0A087WTM6 91 aa14.25□□□□□ -0.13
LINC01960-201ENST00000563759 Q6ZRP5 223 aa14.25□□□□□ -0.13
LINC01960-201ENST00000563759 Q8N814 137 aa14.25□□□□□ -0.13
LINC01960-201ENST00000563759 PRO1854Q9UHT4 67 aa14.25□□□□□ -0.13
LINC01960-201ENST00000563759 TLX1NBP0CAT3 122 aa14.23□□□□□ -0.13
LINC01960-201ENST00000563759 C21orf62-AS1Q17RA5 79 aa14.23□□□□□ -0.13
LINC01960-201ENST00000563759 PGPEP1Q9NXJ5 209 aa14.23□□□□□ -0.13
LINC01960-201ENST00000563759 LOC107984640A0A0U1RRK4 108 aa14.21□□□□□ -0.13
LINC01960-201ENST00000563759 LCE6AA0A183 80 aa14.21□□□□□ -0.14
LINC01960-201ENST00000563759 H7C2G1 150 aa14.2□□□□□ -0.14
LINC01960-201ENST00000563759 NDUFC2O95298 119 aa14.2□□□□□ -0.14
LINC01960-201ENST00000563759 NAA38Q9BRA0 125 aaKnown RBP14.2□□□□□ -0.14
LINC01960-201ENST00000563759 IGKV2-28A0A075B6P5 120 aa14.19□□□□□ -0.14
LINC01960-201ENST00000563759 IGKV2D-28P01615 120 aa14.19□□□□□ -0.14
LINC01960-201ENST00000563759 RPL13AP40429 203 aaKnown RBP14.19□□□□□ -0.14
LINC01960-201ENST00000563759 C9orf118A6NHY6 69 aa14.18□□□□□ -0.14
LINC01960-201ENST00000563759 H3BUT2 72 aa14.18□□□□□ -0.14
LINC01960-201ENST00000563759 Q1RN00 199 aa14.18□□□□□ -0.14
LINC01960-201ENST00000563759 FRAS1Q86XX4 4008 aa14.18□□□□□ -0.14
LINC01960-201ENST00000563759 TSPAN13O95857 204 aa14.18□□□□□ -0.14
LINC01960-201ENST00000563759 GAGE2BQ13066 116 aa14.18□□□□□ -0.14
LINC01960-201ENST00000563759 TRAV13-2A0A0B4J235 113 aa14.17□□□□□ -0.14
LINC01960-201ENST00000563759 LINC00337Q8N6G1 96 aa14.17□□□□□ -0.14
LINC01960-201ENST00000563759 Q8NDZ9 215 aa14.16□□□□□ -0.14
LINC01960-201ENST00000563759 NCR3O14931 201 aa14.16□□□□□ -0.14
LINC01960-201ENST00000563759 PRR3P79522 188 aaKnown RBP14.16□□□□□ -0.14
LINC01960-201ENST00000563759 C9orf129Q5T035 196 aaKnown RBP14.16□□□□□ -0.14
LINC01960-201ENST00000563759 RTL8CO15255 209 aa14.15□□□□□ -0.14
LINC01960-201ENST00000563759 TNP2Q05952 138 aa14.15□□□□□ -0.14
LINC01960-201ENST00000563759 C9orf163Q8N9P6 203 aa14.14□□□□□ -0.15
LINC01960-201ENST00000563759 SACSQ9NZJ4 4579 aa14.14□□□□□ -0.15
LINC01960-201ENST00000563759 OR13C6PQ8NH95 151 aa14.14□□□□□ -0.15
LINC01960-201ENST00000563759 PKIGQ9Y2B9 76 aa14.13□□□□□ -0.15
LINC01960-201ENST00000563759 DNAH17Q9UFH2 4485 aa14.13□□□□□ -0.15
LINC01960-201ENST00000563759 A0A096LNI7 61 aa14.11□□□□□ -0.15
LINC01960-201ENST00000563759 LINC01620Q4KN68 170 aa14.11□□□□□ -0.15
LINC01960-201ENST00000563759 IGKV2-24A0A0C4DH68 120 aa14.1□□□□□ -0.15
LINC01960-201ENST00000563759 C16orf90A8MZG2 172 aa14.1□□□□□ -0.15
LINC01960-201ENST00000563759 VPREB1P12018 145 aa14.1□□□□□ -0.15
LINC01960-201ENST00000563759 PSMB2P49721 201 aa14.1□□□□□ -0.15
LINC01960-201ENST00000563759 HECTD4Q9Y4D8 3996 aa14.1□□□□□ -0.15
LINC01960-201ENST00000563759 A0A1W2PPM0 123 aa14.1□□□□□ -0.15
LINC01960-201ENST00000563759 S100A7L2Q5SY68 101 aa14.09□□□□□ -0.15
LINC01960-201ENST00000563759 TRBV10-2A0A0K0K1G8 114 aa14.08□□□□□ -0.16
LINC01960-201ENST00000563759 FABP2P12104 132 aa14.08□□□□□ -0.16
LINC01960-201ENST00000563759 FUSP35637 526 aaKnown RBP eCLIP14.08□□□□□ -0.16
LINC01960-201ENST00000563759 VAMP3Q15836 100 aa14.07□□□□□ -0.16
LINC01960-201ENST00000563759 NKAPP1Q8N9T2 125 aa14.07□□□□□ -0.16
LINC01960-201ENST00000563759 TMEM126AQ9H061 195 aa14.07□□□□□ -0.16
LINC01960-201ENST00000563759 IGLV5-52A0A0A0MRZ9 124 aa14.06□□□□□ -0.16
LINC01960-201ENST00000563759 SERTAD4-AS1Q5TG53 156 aa14.06□□□□□ -0.16
LINC01960-201ENST00000563759 FAM168BA1KXE4 195 aa14.06□□□□□ -0.16
LINC01960-201ENST00000563759 PLA2G2DQ9UNK4 145 aa14.05□□□□□ -0.16
LINC01960-201ENST00000563759 TRIAP1O43715 76 aa14.04□□□□□ -0.16
LINC01960-201ENST00000563759 SDIM1Q6ZPB5 146 aa14.04□□□□□ -0.16
LINC01960-201ENST00000563759 FAM19A5Q7Z5A7 132 aaPredicted RBP14.04□□□□□ -0.16
LINC01960-201ENST00000563759 M0R378 163 aa14.04□□□□□ -0.16
LINC01960-201ENST00000563759 LYRM7Q5U5X0 104 aa14.04□□□□□ -0.16
LINC01960-201ENST00000563759 CHTF8P0CG12 524 aa14.03□□□□□ -0.16
LINC01960-201ENST00000563759 SCGB1C2P0DMR2 95 aa14.03□□□□□ -0.16
LINC01960-201ENST00000563759 SMIM11BQ8TCY0 68 aa14.02□□□□□ -0.16
LINC01960-201ENST00000563759 COX6CP09669 75 aa14.01□□□□□ -0.17
LINC01960-201ENST00000563759 IGLV6-57P01721 117 aa14.01□□□□□ -0.17
LINC01960-201ENST00000563759 LINC00474Q9P2X8 69 aa14.01□□□□□ -0.17
LINC01960-201ENST00000563759 SPCS1Q9Y6A9 102 aa14.01□□□□□ -0.17
LINC01960-201ENST00000563759 TRBV10-3A0A0K0K1G6 114 aa14□□□□□ -0.17
LINC01960-201ENST00000563759 RPL28P46779 137 aaKnown RBP14□□□□□ -0.17
LINC01960-201ENST00000563759 IGLV5-37A0A075B6J1 123 aa13.99□□□□□ -0.17
LINC01960-201ENST00000563759 GAGE10A6NGK3 116 aa13.99□□□□□ -0.17
LINC01960-201ENST00000563759 FAT2Q9NYQ8 4349 aa13.98□□□□□ -0.17
LINC01960-201ENST00000563759 KMT2CQ8NEZ4 4911 aaKnown RBP13.98□□□□□ -0.17
LINC01960-201ENST00000563759 KRTAP7-1Q8IUC3 87 aa13.97□□□□□ -0.17
LINC01960-201ENST00000563759 RYR2Q92736 4967 aa13.97□□□□□ -0.17
LINC01960-201ENST00000563759 C7orf33Q8WU49 177 aa13.97□□□□□ -0.17
LINC01960-201ENST00000563759 K7EP34 96 aa13.96□□□□□ -0.17
LINC01960-201ENST00000563759 KRTAP10-2P60368 255 aa13.96□□□□□ -0.17
LINC01960-201ENST00000563759 C22orf24Q9Y442 160 aa13.96□□□□□ -0.17
LINC01960-201ENST00000563759 GTF2H5Q6ZYL4 71 aa13.95□□□□□ -0.18
LINC01960-201ENST00000563759 TRAV23DV6A0A075B6W5 121 aa13.95□□□□□ -0.18
LINC01960-201ENST00000563759 M0QXV9 152 aa13.95□□□□□ -0.18
LINC01960-201ENST00000563759 MRPL55Q7Z7F7 128 aaKnown RBP13.95□□□□□ -0.18
LINC01960-201ENST00000563759 A0A1W2PNN7 141 aa13.94□□□□□ -0.18
LINC01960-201ENST00000563759 LINC00336Q6ZUF6 198 aa13.94□□□□□ -0.18
LINC01960-201ENST00000563759 DPH3Q96FX2 82 aa13.94□□□□□ -0.18
LINC01960-201ENST00000563759 PANO1I0J062 215 aa13.93□□□□□ -0.18
LINC01960-201ENST00000563759 SPACA4Q8TDM5 124 aa13.93□□□□□ -0.18
LINC01960-201ENST00000563759 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.93□□□□□ -0.18
LINC01960-201ENST00000563759 TRBV20-1A0A075B6N2 111 aa13.92□□□□□ -0.18
LINC01960-201ENST00000563759 TCL1BO95988 128 aa13.92□□□□□ -0.18
LINC01960-201ENST00000563759 DNAH11Q96DT5 4516 aa13.92□□□□□ -0.18
LINC01960-201ENST00000563759 C6orf99Q4VX62 202 aa13.91□□□□□ -0.18
LINC01960-201ENST00000563759 CLEC2BQ92478 149 aa13.91□□□□□ -0.18
LINC01960-201ENST00000563759 LINC00167Q96N53 147 aa13.91□□□□□ -0.18
LINC01960-201ENST00000563759 RPL37AP8A6NKH3 93 aa13.9□□□□□ -0.18
LINC01960-201ENST00000563759 PKD1P98161 4303 aa13.89□□□□□ -0.19
LINC01960-201ENST00000563759 ZNF73O43830 326 aaPredicted RBP13.89□□□□□ -0.19
LINC01960-201ENST00000563759 UBE2V1Q13404 147 aa13.89□□□□□ -0.19
LINC01960-201ENST00000563759 DIRC1Q969H9 104 aa13.89□□□□□ -0.19
LINC01960-201ENST00000563759 H3BMG7 143 aa13.88□□□□□ -0.19
LINC01960-201ENST00000563759 ATXN8Q156A1 80 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms