RNA–Protein interactions for RNA: ENST00000563741.5

SPSB3-204, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 5

Gene SPSB3, Length 1,746 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-204ENST00000563741 A6NJY4 79 aa12.45□□□□□ -0.42
SPSB3-204ENST00000563741 RPL18AQ02543 176 aaKnown RBP12.45□□□□□ -0.42
SPSB3-204ENST00000563741 XAGE1AQ9HD64 81 aa12.45□□□□□ -0.42
SPSB3-204ENST00000563741 GAGE2EQ4V326 116 aa12.45□□□□□ -0.42
SPSB3-204ENST00000563741 NHP2Q9NX24 153 aaKnown RBP12.45□□□□□ -0.42
SPSB3-204ENST00000563741 GAGE2DQ9UEU5 116 aa12.45□□□□□ -0.42
SPSB3-204ENST00000563741 C9orf163Q8N9P6 203 aa12.44□□□□□ -0.42
SPSB3-204ENST00000563741 PKD1P98161 4303 aa12.43□□□□□ -0.42
SPSB3-204ENST00000563741 LOC107984640A0A0U1RRK4 108 aa12.42□□□□□ -0.42
SPSB3-204ENST00000563741 K7ERJ3 54 aa12.42□□□□□ -0.42
SPSB3-204ENST00000563741 A0A1B0GWB2 263 aa12.42□□□□□ -0.42
SPSB3-204ENST00000563741 A6NDN8 102 aa12.42□□□□□ -0.42
SPSB3-204ENST00000563741 Q8NDZ9 215 aa12.42□□□□□ -0.42
SPSB3-204ENST00000563741 C16orf90A8MZG2 172 aa12.41□□□□□ -0.42
SPSB3-204ENST00000563741 CFC1BP0CG36 223 aa12.41□□□□□ -0.42
SPSB3-204ENST00000563741 CFC1P0CG37 223 aa12.41□□□□□ -0.42
SPSB3-204ENST00000563741 FUSP35637 526 aaKnown RBP eCLIP12.41□□□□□ -0.42
SPSB3-204ENST00000563741 LINC01620Q4KN68 170 aa12.41□□□□□ -0.42
SPSB3-204ENST00000563741 C9orf129Q5T035 196 aaKnown RBP12.41□□□□□ -0.42
SPSB3-204ENST00000563741 GAGE2BQ13066 116 aa12.4□□□□□ -0.43
SPSB3-204ENST00000563741 DNAH11Q96DT5 4516 aa12.39□□□□□ -0.43
SPSB3-204ENST00000563741 PKHD1P08F94 4074 aa12.38□□□□□ -0.43
SPSB3-204ENST00000563741 IGKV2-28A0A075B6P5 120 aa12.38□□□□□ -0.43
SPSB3-204ENST00000563741 A0A096LNI7 61 aa12.38□□□□□ -0.43
SPSB3-204ENST00000563741 A0A0B4J2C4 111 aa12.38□□□□□ -0.43
SPSB3-204ENST00000563741 IGKV2D-28P01615 120 aa12.38□□□□□ -0.43
SPSB3-204ENST00000563741 KRTAP10-2P60368 255 aa12.38□□□□□ -0.43
SPSB3-204ENST00000563741 NDUFC2O95298 119 aa12.37□□□□□ -0.43
SPSB3-204ENST00000563741 COL5A1-AS1Q5SY13 56 aa12.37□□□□□ -0.43
SPSB3-204ENST00000563741 IGLV5-52A0A0A0MRZ9 124 aa12.37□□□□□ -0.43
SPSB3-204ENST00000563741 SDIM1Q6ZPB5 146 aa12.37□□□□□ -0.43
SPSB3-204ENST00000563741 PGPEP1Q9NXJ5 209 aa12.36□□□□□ -0.43
SPSB3-204ENST00000563741 PRR3P79522 188 aaKnown RBP12.35□□□□□ -0.43
SPSB3-204ENST00000563741 IGKV2-24A0A0C4DH68 120 aa12.34□□□□□ -0.43
SPSB3-204ENST00000563741 VPREB1P12018 145 aa12.34□□□□□ -0.43
SPSB3-204ENST00000563741 RAB37Q96AX2 223 aa12.34□□□□□ -0.43
SPSB3-204ENST00000563741 PKIGQ9Y2B9 76 aa12.34□□□□□ -0.43
SPSB3-204ENST00000563741 LINC00337Q8N6G1 96 aa12.34□□□□□ -0.43
SPSB3-204ENST00000563741 PRO1854Q9UHT4 67 aa12.33□□□□□ -0.44
SPSB3-204ENST00000563741 NCR3O14931 201 aa12.32□□□□□ -0.44
SPSB3-204ENST00000563741 CHTF8P0CG12 524 aa12.32□□□□□ -0.44
SPSB3-204ENST00000563741 LBHQ53QV2 105 aaPredicted RBP12.32□□□□□ -0.44
SPSB3-204ENST00000563741 SERTAD4-AS1Q5TG53 156 aa12.32□□□□□ -0.44
SPSB3-204ENST00000563741 FAM168BA1KXE4 195 aa12.31□□□□□ -0.44
SPSB3-204ENST00000563741 TAX1BP3O14907 124 aa12.31□□□□□ -0.44
SPSB3-204ENST00000563741 PLA2G2DQ9UNK4 145 aa12.31□□□□□ -0.44
SPSB3-204ENST00000563741 DNAH5Q8TE73 4624 aa12.3□□□□□ -0.44
SPSB3-204ENST00000563741 KRTAP7-1Q8IUC3 87 aa12.3□□□□□ -0.44
SPSB3-204ENST00000563741 TRAV13-2A0A0B4J235 113 aa12.29□□□□□ -0.44
SPSB3-204ENST00000563741 RPL13AP40429 203 aaKnown RBP12.29□□□□□ -0.44
SPSB3-204ENST00000563741 TRBV10-2A0A0K0K1G8 114 aa12.28□□□□□ -0.44
SPSB3-204ENST00000563741 PANO1I0J062 215 aa12.28□□□□□ -0.44
SPSB3-204ENST00000563741 LINC00474Q9P2X8 69 aa12.28□□□□□ -0.44
SPSB3-204ENST00000563741 H7C2G1 150 aa12.27□□□□□ -0.45
SPSB3-204ENST00000563741 TSPAN13O95857 204 aa12.27□□□□□ -0.45
SPSB3-204ENST00000563741 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.27□□□□□ -0.45
SPSB3-204ENST00000563741 IGLV5-37A0A075B6J1 123 aa12.26□□□□□ -0.45
SPSB3-204ENST00000563741 CDK2AP2O75956 126 aa12.26□□□□□ -0.45
SPSB3-204ENST00000563741 FAM19A5Q7Z5A7 132 aaPredicted RBP12.26□□□□□ -0.45
SPSB3-204ENST00000563741 OR13C6PQ8NH95 151 aa12.25□□□□□ -0.45
SPSB3-204ENST00000563741 SPACA4Q8TDM5 124 aa12.25□□□□□ -0.45
SPSB3-204ENST00000563741 NAA38Q9BRA0 125 aaKnown RBP12.25□□□□□ -0.45
SPSB3-204ENST00000563741 A0A1W2PNN7 141 aa12.25□□□□□ -0.45
SPSB3-204ENST00000563741 NKAPP1Q8N9T2 125 aa12.25□□□□□ -0.45
SPSB3-204ENST00000563741 DYNC1H1Q14204 4646 aaKnown RBP12.25□□□□□ -0.45
SPSB3-204ENST00000563741 M0R378 163 aa12.24□□□□□ -0.45
SPSB3-204ENST00000563741 C9orf118A6NHY6 69 aa12.23□□□□□ -0.45
SPSB3-204ENST00000563741 IGLV6-57P01721 117 aa12.23□□□□□ -0.45
SPSB3-204ENST00000563741 Q1RN00 199 aa12.23□□□□□ -0.45
SPSB3-204ENST00000563741 S100A7L2Q5SY68 101 aa12.23□□□□□ -0.45
SPSB3-204ENST00000563741 TMEM126AQ9H061 195 aa12.23□□□□□ -0.45
SPSB3-204ENST00000563741 TRBV10-3A0A0K0K1G6 114 aa12.22□□□□□ -0.45
SPSB3-204ENST00000563741 H3BUT2 72 aa12.22□□□□□ -0.45
SPSB3-204ENST00000563741 C7orf33Q8WU49 177 aa12.22□□□□□ -0.45
SPSB3-204ENST00000563741 C22orf24Q9Y442 160 aa12.22□□□□□ -0.45
SPSB3-204ENST00000563741 KIAA1109Q2LD37 5005 aa12.21□□□□□ -0.45
SPSB3-204ENST00000563741 GAGE10A6NGK3 116 aa12.2□□□□□ -0.46
SPSB3-204ENST00000563741 M0QXV9 152 aa12.2□□□□□ -0.46
SPSB3-204ENST00000563741 MRPL55Q7Z7F7 128 aaKnown RBP12.2□□□□□ -0.46
SPSB3-204ENST00000563741 SMIM11BQ8TCY0 68 aa12.19□□□□□ -0.46
SPSB3-204ENST00000563741 KRTAP10-1P60331 282 aa12.18□□□□□ -0.46
SPSB3-204ENST00000563741 TRIAP1O43715 76 aa12.17□□□□□ -0.46
SPSB3-204ENST00000563741 A0A087WYN8 130 aa12.17□□□□□ -0.46
SPSB3-204ENST00000563741 EPM2AB3EWF7 344 aa12.17□□□□□ -0.46
SPSB3-204ENST00000563741 RPL28P46779 137 aaKnown RBP12.17□□□□□ -0.46
SPSB3-204ENST00000563741 DPH3Q96FX2 82 aa12.17□□□□□ -0.46
SPSB3-204ENST00000563741 LINC00167Q96N53 147 aa12.17□□□□□ -0.46
SPSB3-204ENST00000563741 HERC2O95714 4834 aa12.16□□□□□ -0.46
SPSB3-204ENST00000563741 A0A1W2PPM0 123 aa12.16□□□□□ -0.46
SPSB3-204ENST00000563741 PSMB2P49721 201 aa12.15□□□□□ -0.46
SPSB3-204ENST00000563741 TRAV23DV6A0A075B6W5 121 aa12.14□□□□□ -0.47
SPSB3-204ENST00000563741 Q6ZSA8 131 aa12.14□□□□□ -0.47
SPSB3-204ENST00000563741 FAM30AQ9NZY2 134 aa12.14□□□□□ -0.47
SPSB3-204ENST00000563741 RPL37AP8A6NKH3 93 aa12.14□□□□□ -0.47
SPSB3-204ENST00000563741 IGLV1-50A0A075B6I6 118 aa12.13□□□□□ -0.47
SPSB3-204ENST00000563741 PHF5AQ7RTV0 110 aaKnown RBP12.13□□□□□ -0.47
SPSB3-204ENST00000563741 PLAC8Q9NZF1 115 aa12.13□□□□□ -0.47
SPSB3-204ENST00000563741 A0A1B0GV90 55 aa12.12□□□□□ -0.47
SPSB3-204ENST00000563741 FABP2P12104 132 aa12.11□□□□□ -0.47
SPSB3-204ENST00000563741 KCNQ1DNQ9H478 68 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 93.3 ms