RNA–Protein interactions for RNA: ENST00000561945.1

SPG7-205, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 411 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-205ENST00000561945 VPREB1P12018 145 aa8.41□□□□□ -1.06
SPG7-205ENST00000561945 IGKV2-28A0A075B6P5 120 aa8.4□□□□□ -1.06
SPG7-205ENST00000561945 IGKV2D-28P01615 120 aa8.4□□□□□ -1.06
SPG7-205ENST00000561945 COX17Q14061 63 aa8.4□□□□□ -1.06
SPG7-205ENST00000561945 FAM19A2Q8N3H0 131 aa8.4□□□□□ -1.06
SPG7-205ENST00000561945 TMEM126AQ9H061 195 aa8.4□□□□□ -1.06
SPG7-205ENST00000561945 CHTOPQ9Y3Y2 248 aaKnown RBP8.4□□□□□ -1.06
SPG7-205ENST00000561945 TRAV12-1A0A0B4J245 112 aa8.39□□□□□ -1.07
SPG7-205ENST00000561945 SERF1AO75920 110 aa8.39□□□□□ -1.07
SPG7-205ENST00000561945 LEPROTL1O95214 131 aa8.39□□□□□ -1.07
SPG7-205ENST00000561945 RETNLBQ9BQ08 111 aa8.39□□□□□ -1.07
SPG7-205ENST00000561945 ZNF22P17026 224 aaPredicted RBP8.38□□□□□ -1.07
SPG7-205ENST00000561945 S100A1P23297 94 aa8.38□□□□□ -1.07
SPG7-205ENST00000561945 SND1-IT1Q9HBX3 110 aa8.38□□□□□ -1.07
SPG7-205ENST00000561945 HSPB8Q9UJY1 196 aa8.38□□□□□ -1.07
SPG7-205ENST00000561945 IGKV2D-26A0A0A0MRZ7 120 aa8.37□□□□□ -1.07
SPG7-205ENST00000561945 M0R378 163 aa8.37□□□□□ -1.07
SPG7-205ENST00000561945 PRLHP81277 87 aa8.37□□□□□ -1.07
SPG7-205ENST00000561945 TMEM170BQ5T4T1 132 aa8.37□□□□□ -1.07
SPG7-205ENST00000561945 PLEKHB2Q96CS7 222 aa8.37□□□□□ -1.07
SPG7-205ENST00000561945 ERG28Q9UKR5 140 aa8.37□□□□□ -1.07
SPG7-205ENST00000561945 C11orf86A6NJI1 115 aa8.36□□□□□ -1.07
SPG7-205ENST00000561945 TMEM238C9JI98 176 aa8.36□□□□□ -1.07
SPG7-205ENST00000561945 PFN2P35080 140 aa8.36□□□□□ -1.07
SPG7-205ENST00000561945 RPL24P83731 157 aaKnown RBP8.36□□□□□ -1.07
SPG7-205ENST00000561945 Q8NDZ9 215 aa8.36□□□□□ -1.07
SPG7-205ENST00000561945 IGLV7-46A0A075B6I9 117 aa8.35□□□□□ -1.07
SPG7-205ENST00000561945 LINC00310P59036 64 aa8.35□□□□□ -1.07
SPG7-205ENST00000561945 SFTA2Q6UW10 78 aa8.35□□□□□ -1.07
SPG7-205ENST00000561945 FAM19A1Q7Z5A9 133 aa8.35□□□□□ -1.07
SPG7-205ENST00000561945 HIST1H2BKO60814 126 aa8.34□□□□□ -1.07
SPG7-205ENST00000561945 HIST1H2BJP06899 126 aa8.34□□□□□ -1.07
SPG7-205ENST00000561945 FABP4P15090 132 aa8.34□□□□□ -1.07
SPG7-205ENST00000561945 HIST1H2BOP23527 126 aa8.34□□□□□ -1.07
SPG7-205ENST00000561945 HIST1H2BBP33778 126 aa8.34□□□□□ -1.07
SPG7-205ENST00000561945 HIST1H2BDP58876 126 aa8.34□□□□□ -1.07
SPG7-205ENST00000561945 HIST1H2BCP62807 126 aa8.34□□□□□ -1.07
SPG7-205ENST00000561945 HIST2H2BEQ16778 126 aa8.34□□□□□ -1.07
SPG7-205ENST00000561945 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.34□□□□□ -1.07
SPG7-205ENST00000561945 HIST1H2BHQ93079 126 aa8.34□□□□□ -1.07
SPG7-205ENST00000561945 HIST1H2BNQ99877 126 aa8.34□□□□□ -1.07
SPG7-205ENST00000561945 HIST1H2BMQ99879 126 aa8.34□□□□□ -1.07
SPG7-205ENST00000561945 CDIP1Q9H305 208 aa8.34□□□□□ -1.07
SPG7-205ENST00000561945 H0Y8G0 127 aa8.33□□□□□ -1.08
SPG7-205ENST00000561945 ZNF625Q96I27 306 aaPredicted RBP8.33□□□□□ -1.08
SPG7-205ENST00000561945 KRTAP9-6A0A140TA67 174 aa8.32□□□□□ -1.08
SPG7-205ENST00000561945 SPAG11AQ6PDA7 123 aa8.32□□□□□ -1.08
SPG7-205ENST00000561945 C3orf22Q8N5N4 141 aa8.32□□□□□ -1.08
SPG7-205ENST00000561945 MAP1LC3CQ9BXW4 147 aa8.32□□□□□ -1.08
SPG7-205ENST00000561945 TMEM223A0PJW6 202 aa8.3□□□□□ -1.08
SPG7-205ENST00000561945 SPRR4Q96PI1 79 aa8.3□□□□□ -1.08
SPG7-205ENST00000561945 ATP6V1G1O75348 118 aa8.29□□□□□ -1.08
SPG7-205ENST00000561945 PLNP26678 52 aa8.29□□□□□ -1.08
SPG7-205ENST00000561945 FP248Q71RG6 208 aaPredicted RBP8.29□□□□□ -1.08
SPG7-205ENST00000561945 PPDPFQ9H3Y8 114 aa8.29□□□□□ -1.08
SPG7-205ENST00000561945 DPM2O94777 84 aa8.28□□□□□ -1.08
SPG7-205ENST00000561945 SPRR1AP35321 89 aa8.27□□□□□ -1.09
SPG7-205ENST00000561945 HIGD2AQ9BW72 106 aa8.27□□□□□ -1.09
SPG7-205ENST00000561945 HERVK_113P61574 105 aa8.26□□□□□ -1.09
SPG7-205ENST00000561945 COA6Q5JTJ3 125 aaKnown RBP8.26□□□□□ -1.09
SPG7-205ENST00000561945 KRTAP4-16G5E9R7 235 aaPredicted RBP8.25□□□□□ -1.09
SPG7-205ENST00000561945 IGKCP01834 107 aa8.25□□□□□ -1.09
SPG7-205ENST00000561945 KRTAP13-3Q3SY46 172 aa8.25□□□□□ -1.09
SPG7-205ENST00000561945 LINC00337Q8N6G1 96 aa8.25□□□□□ -1.09
SPG7-205ENST00000561945 ZNF706Q9Y5V0 76 aaPredicted RBP8.25□□□□□ -1.09
SPG7-205ENST00000561945 LINC00587B1AMM8 73 aa8.24□□□□□ -1.09
SPG7-205ENST00000561945 PRYO14603 147 aa8.24□□□□□ -1.09
SPG7-205ENST00000561945 KCNQ1DNQ9H478 68 aa8.24□□□□□ -1.09
SPG7-205ENST00000561945 MYMXA0A1B0GTQ4 84 aa8.23□□□□□ -1.09
SPG7-205ENST00000561945 SYS1-DBNDD2H3BUS1 97 aa8.23□□□□□ -1.09
SPG7-205ENST00000561945 LINC00158P58513 81 aa8.23□□□□□ -1.09
SPG7-205ENST00000561945 HERV-K104P63124 156 aa8.23□□□□□ -1.09
SPG7-205ENST00000561945 ASB16-AS1Q495Z4 193 aa8.23□□□□□ -1.09
SPG7-205ENST00000561945 PET117Q6UWS5 81 aa8.23□□□□□ -1.09
SPG7-205ENST00000561945 PMCHL2Q9BQD1 86 aa8.23□□□□□ -1.09
SPG7-205ENST00000561945 LEPROTO15243 131 aa8.22□□□□□ -1.09
SPG7-205ENST00000561945 LINC00483Q53H64 154 aa8.22□□□□□ -1.09
SPG7-205ENST00000561945 NDUFA12Q9UI09 145 aa8.22□□□□□ -1.09
SPG7-205ENST00000561945 FSIP2Q5CZC0 6907 aa8.22□□□□□ -1.09
SPG7-205ENST00000561945 SPINK1P00995 79 aa8.21□□□□□ -1.1
SPG7-205ENST00000561945 MEIG1Q5JSS6 88 aa8.21□□□□□ -1.1
SPG7-205ENST00000561945 RPS29P62273 56 aaKnown RBP8.2□□□□□ -1.1
SPG7-205ENST00000561945 Q8NBF4 154 aa8.2□□□□□ -1.1
SPG7-205ENST00000561945 J3QQQ9 107 aa8.19□□□□□ -1.1
SPG7-205ENST00000561945 LGALS3P17931 250 aaKnown RBP8.19□□□□□ -1.1
SPG7-205ENST00000561945 NMUP48645 174 aa8.19□□□□□ -1.1
SPG7-205ENST00000561945 C4orf48Q5BLP8 95 aa8.19□□□□□ -1.1
SPG7-205ENST00000561945 LINC01545Q5VT33 79 aa8.19□□□□□ -1.1
SPG7-205ENST00000561945 SMCR5Q8TEV8 140 aa8.19□□□□□ -1.1
SPG7-205ENST00000561945 LOC107984156A0A0G2JMH3 177 aa8.18□□□□□ -1.1
SPG7-205ENST00000561945 A0A0U1RRA0 63 aa8.18□□□□□ -1.1
SPG7-205ENST00000561945 C20orf202A1L168 122 aa8.18□□□□□ -1.1
SPG7-205ENST00000561945 C3orf79P0CE67 100 aa8.18□□□□□ -1.1
SPG7-205ENST00000561945 SMIM13P0DJ93 91 aa8.18□□□□□ -1.1
SPG7-205ENST00000561945 KRTDAPP60985 99 aa8.18□□□□□ -1.1
SPG7-205ENST00000561945 ARL17AQ8IVW1 177 aa8.18□□□□□ -1.1
SPG7-205ENST00000561945 BOD1L2Q8IYS8 172 aa8.18□□□□□ -1.1
SPG7-205ENST00000561945 DAND5Q8N907 189 aa8.18□□□□□ -1.1
SPG7-205ENST00000561945 E9PLD3 99 aa8.16□□□□□ -1.1
SPG7-205ENST00000561945 S100A6P06703 90 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms