RNA–Protein interactions for RNA: ENST00000561898.1

NPTN-203, Transcript of neuroplastin, humanhuman

TSL 2

Gene NPTN, Length 447 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPTN-203ENST00000561898 COX8AP10176 69 aa-0.83□□□□□ -2.54
NPTN-203ENST00000561898 WHAMMP3Q1A5X7 153 aa-0.83□□□□□ -2.54
NPTN-203ENST00000561898 KRTAP19-6Q3LI70 58 aa-0.83□□□□□ -2.54
NPTN-203ENST00000561898 BTAF1O14981 1849 aa-0.83□□□□□ -2.54
NPTN-203ENST00000561898 ANKRD36A6QL64 1941 aa-0.83□□□□□ -2.54
NPTN-203ENST00000561898 SLIT1O75093 1534 aa-0.84□□□□□ -2.54
NPTN-203ENST00000561898 CENPEQ02224 2701 aa-0.84□□□□□ -2.54
NPTN-203ENST00000561898 XIRP2A4UGR9 3374 aa-0.84□□□□□ -2.54
NPTN-203ENST00000561898 C10orf113Q5VZT2 155 aa-0.84□□□□□ -2.54
NPTN-203ENST00000561898 COMMD6Q7Z4G1 85 aa-0.84□□□□□ -2.54
NPTN-203ENST00000561898 ZNF436-AS1Q8NC38 126 aaPredicted RBP-0.84□□□□□ -2.54
NPTN-203ENST00000561898 CPSF1Q10570 1443 aaKnown RBP-0.84□□□□□ -2.54
NPTN-203ENST00000561898 MAP3K1Q13233 1512 aa-0.84□□□□□ -2.54
NPTN-203ENST00000561898 KIF21AQ7Z4S6 1674 aa-0.84□□□□□ -2.54
NPTN-203ENST00000561898 SPEF2Q9C093 1822 aa-0.85□□□□□ -2.54
NPTN-203ENST00000561898 DNAH12Q6ZR08 3092 aa-0.85□□□□□ -2.54
NPTN-203ENST00000561898 LOC400499M0QZD8 3231 aa-0.85□□□□□ -2.54
NPTN-203ENST00000561898 MYH7P12883 1935 aa-0.85□□□□□ -2.55
NPTN-203ENST00000561898 MT1BP07438 61 aa-0.85□□□□□ -2.55
NPTN-203ENST00000561898 C4AP0C0L4 1744 aa-0.85□□□□□ -2.55
NPTN-203ENST00000561898 C4BP0C0L5 1744 aa-0.85□□□□□ -2.55
NPTN-203ENST00000561898 NAIPQ13075 1403 aa-0.85□□□□□ -2.55
NPTN-203ENST00000561898 C5orf38Q86SI9 138 aa-0.85□□□□□ -2.55
NPTN-203ENST00000561898 MT1MQ8N339 61 aa-0.85□□□□□ -2.55
NPTN-203ENST00000561898 USMG5Q96IX5 58 aa-0.85□□□□□ -2.55
NPTN-203ENST00000561898 ARL2-SNX15V9GYD0 113 aa-0.85□□□□□ -2.55
NPTN-203ENST00000561898 CENPFP49454 3210 aa-0.85□□□□□ -2.55
NPTN-203ENST00000561898 NSD3Q9BZ95 1437 aa-0.86□□□□□ -2.55
NPTN-203ENST00000561898 DEFB1P60022 68 aa-0.86□□□□□ -2.55
NPTN-203ENST00000561898 BTG2P78543 158 aa-0.86□□□□□ -2.55
NPTN-203ENST00000561898 HMGXB3Q12766 1538 aa-0.86□□□□□ -2.55
NPTN-203ENST00000561898 ARHGEF12Q9NZN5 1544 aa-0.86□□□□□ -2.55
NPTN-203ENST00000561898 RGPD3A6NKT7 1758 aaPredicted RBP-0.86□□□□□ -2.55
NPTN-203ENST00000561898 RGPD4Q7Z3J3 1758 aa-0.86□□□□□ -2.55
NPTN-203ENST00000561898 CDC42BPGQ6DT37 1551 aa-0.87□□□□□ -2.55
NPTN-203ENST00000561898 LINC00959A0A1B0GUT2 108 aa-0.87□□□□□ -2.55
NPTN-203ENST00000561898 H3BNG1 76 aa-0.87□□□□□ -2.55
NPTN-203ENST00000561898 MT2AP02795 61 aa-0.87□□□□□ -2.55
NPTN-203ENST00000561898 LINC00474Q9P2X8 69 aa-0.87□□□□□ -2.55
NPTN-203ENST00000561898 CICQ96RK0 1608 aaPredicted RBP-0.87□□□□□ -2.55
NPTN-203ENST00000561898 CDC42BPAQ5VT25 1732 aa-0.87□□□□□ -2.55
NPTN-203ENST00000561898 KIAA1551Q9HCM1 1747 aa-0.87□□□□□ -2.55
NPTN-203ENST00000561898 MAGI1Q96QZ7 1491 aaPredicted RBP-0.87□□□□□ -2.55
NPTN-203ENST00000561898 RIMS1Q86UR5 1692 aaKnown RBP-0.88□□□□□ -2.55
NPTN-203ENST00000561898 SMR3BP02814 79 aaPredicted RBP-0.88□□□□□ -2.55
NPTN-203ENST00000561898 MT1EP04732 61 aa-0.88□□□□□ -2.55
NPTN-203ENST00000561898 FGF7P21781 194 aa-0.88□□□□□ -2.55
NPTN-203ENST00000561898 FAM223AQ8IWN6 122 aa-0.88□□□□□ -2.55
NPTN-203ENST00000561898 MT1LQ93083 61 aa-0.88□□□□□ -2.55
NPTN-203ENST00000561898 LINC01600Q96MT4 127 aa-0.88□□□□□ -2.55
NPTN-203ENST00000561898 SPRR4Q96PI1 79 aa-0.88□□□□□ -2.55
NPTN-203ENST00000561898 TSC22D3Q99576 134 aa-0.88□□□□□ -2.55
NPTN-203ENST00000561898 PRO1933Q9H354 126 aa-0.88□□□□□ -2.55
NPTN-203ENST00000561898 APLNQ9ULZ1 77 aa-0.88□□□□□ -2.55
NPTN-203ENST00000561898 ANKRD50Q9ULJ7 1429 aa-0.89□□□□□ -2.55
NPTN-203ENST00000561898 TULP4Q9NRJ4 1543 aa-0.89□□□□□ -2.55
NPTN-203ENST00000561898 PSME4Q14997 1843 aa-0.89□□□□□ -2.55
NPTN-203ENST00000561898 AKAIN1P0CW23 69 aa-0.89□□□□□ -2.55
NPTN-203ENST00000561898 CDC42SE2Q9NRR3 84 aa-0.89□□□□□ -2.55
NPTN-203ENST00000561898 ARHGEF5Q12774 1597 aa-0.89□□□□□ -2.55
NPTN-203ENST00000561898 SCN7AQ01118 1682 aa-0.89□□□□□ -2.55
NPTN-203ENST00000561898 NUP188Q5SRE5 1749 aa-0.89□□□□□ -2.55
NPTN-203ENST00000561898 CDH23Q9H251 3354 aa-0.9□□□□□ -2.55
NPTN-203ENST00000561898 CPSF4LA6NMK7 179 aaKnown RBP-0.9□□□□□ -2.55
NPTN-203ENST00000561898 GNG11P61952 73 aa-0.9□□□□□ -2.55
NPTN-203ENST00000561898 LELP1Q5T871 98 aa-0.9□□□□□ -2.55
NPTN-203ENST00000561898 C9orf62Q8N4C0 152 aa-0.9□□□□□ -2.55
NPTN-203ENST00000561898 S4R3F8 94 aa-0.9□□□□□ -2.55
NPTN-203ENST00000561898 RAPGEF6Q8TEU7 1601 aa-0.9□□□□□ -2.55
NPTN-203ENST00000561898 ALKQ9UM73 1620 aa-0.9□□□□□ -2.55
NPTN-203ENST00000561898 ANKRD36CQ5JPF3 1778 aa-0.91□□□□□ -2.55
NPTN-203ENST00000561898 SETBP1Q9Y6X0 1596 aa-0.91□□□□□ -2.55
NPTN-203ENST00000561898 KTN1Q86UP2 1357 aaKnown RBP-0.91□□□□□ -2.55
NPTN-203ENST00000561898 OOSP1A8MZH6 123 aa-0.91□□□□□ -2.56
NPTN-203ENST00000561898 NDUFA2O43678 99 aa-0.91□□□□□ -2.56
NPTN-203ENST00000561898 FAM167A-AS1Q96KT0 104 aa-0.91□□□□□ -2.56
NPTN-203ENST00000561898 MANBALQ9NQG1 85 aa-0.91□□□□□ -2.56
NPTN-203ENST00000561898 QRICH2Q9H0J4 1663 aa-0.91□□□□□ -2.56
NPTN-203ENST00000561898 TCHHQ07283 1943 aa-0.91□□□□□ -2.56
NPTN-203ENST00000561898 BRCA2P51587 3418 aa-0.92□□□□□ -2.56
NPTN-203ENST00000561898 TIAM2Q8IVF5 1701 aa-0.92□□□□□ -2.56
NPTN-203ENST00000561898 SHROOM2Q13796 1616 aa-0.92□□□□□ -2.56
NPTN-203ENST00000561898 UBE2L5PA0A1B0GUS4 154 aa-0.92□□□□□ -2.56
NPTN-203ENST00000561898 LOC100130705A0A1B0GUX0 176 aa-0.92□□□□□ -2.56
NPTN-203ENST00000561898 A0A1B0GWA3 101 aa-0.92□□□□□ -2.56
NPTN-203ENST00000561898 UBE2L3P68036 154 aaKnown RBP-0.92□□□□□ -2.56
NPTN-203ENST00000561898 FAM107BQ9H098 131 aa-0.92□□□□□ -2.56
NPTN-203ENST00000561898 XRN1Q8IZH2 1706 aaKnown RBP-0.92□□□□□ -2.56
NPTN-203ENST00000561898 MBD5Q9P267 1494 aa-0.92□□□□□ -2.56
NPTN-203ENST00000561898 FAM24AA6NFZ4 105 aa-0.93□□□□□ -2.56
NPTN-203ENST00000561898 F6UZH7 168 aa-0.93□□□□□ -2.56
NPTN-203ENST00000561898 TRAPPC2P0DI81 140 aa-0.93□□□□□ -2.56
NPTN-203ENST00000561898 TRAPPC2BP0DI82 140 aa-0.93□□□□□ -2.56
NPTN-203ENST00000561898 DEFB110Q30KQ9 67 aa-0.93□□□□□ -2.56
NPTN-203ENST00000561898 H1FX-AS1Q4G0G2 97 aa-0.93□□□□□ -2.56
NPTN-203ENST00000561898 C9orf153Q5TBE3 101 aa-0.93□□□□□ -2.56
NPTN-203ENST00000561898 SFTA2Q6UW10 78 aa-0.93□□□□□ -2.56
NPTN-203ENST00000561898 PDCD11Q14690 1871 aaKnown RBP-0.93□□□□□ -2.56
NPTN-203ENST00000561898 VPS13AQ96RL7 3174 aa-0.93□□□□□ -2.56
NPTN-203ENST00000561898 NKTRP30414 1462 aaKnown RBP-0.93□□□□□ -2.56
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms